DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey.

15 pages International audience The Dumont d'Urville Sea (East Antarctic region) has been less investigated for DNA barcoding and molecular taxonomy than other parts of the Southern Ocean, such as the Ross Sea and the Antarctic Peninsula. The Collaborative East Antarctic MARine Census (CEAMARC)...

Full description

Bibliographic Details
Published in:Polar Science
Main Authors: Dettaï, Agnès, Adamowizc, Sarah J., Allcock, Louise, Arango, Claudia P., Barnes, David K.A., Barratt, Iain, Chenuil, Anne, Couloux, Arnaud, Cruaud, Corinne, David, Bruno, Denis, Françoise, Denys, Gaël, Díaz, Angie, Eléaume, Marc, Féral, Jean-Pierre, Froger, Aurélie, Gallut, Cyril, Grant, Rachel, Griffiths, Huw J., Held, Christoph, Hemery, Lenaïg G., Hosie, Graham, Kuklinski, Piotr, Lecointre, Guillaume, Linse, Katrin, Lozouet, Pierre, Mah, Christopher, Monniot, Françoise, Norman, Mark D., O'Hara, Timothy, Ozouf-Costaz, Catherine, Piedallu, Claire, Pierrat, Benjamin, Poulin, Elie, Puillandre, Nicolas, Riddle, Martin, Samadi, Sarah, Saucède, Thomas, Schubart, Christoph, Smith, Peter J., Stevens, Darren W., Steinke, Dirk, Strugnell, Jan M., Tarnowska, Katarzyna, Wadley, Victoria, Améziane, Nadia
Other Authors: Systématique, adaptation, évolution (SAE), Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS), Canadian Centre for DNA Barcoding, University of Guelph, Martin Ryan Marine Science Institute, National University of Ireland Galway (NUI Galway), School of Biological Sciences, Queen's University Belfast (QUB), Natural Environments Program, Queensland Museum, British Antarctic Survey (BAS), Natural Environment Research Council (NERC), Diversité, évolution et écologie fonctionnelle marine (DIMAR), Université de la Méditerranée - Aix-Marseille 2-Centre National de la Recherche Scientifique (CNRS), Genoscope - Centre national de séquençage Evry (GENOSCOPE), Université Paris-Saclay-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Biogéosciences UMR 6282 (BGS), Université de Bourgogne (UB)-Centre National de la Recherche Scientifique (CNRS), Mer, molécules et santé EA 2160 (MMS), Le Mans Université (UM)-Université de Nantes - UFR des Sciences et des Techniques (UN UFR ST), Université de Nantes (UN)-Université de Nantes (UN)-Université de Nantes - UFR des Sciences Pharmaceutiques et Biologiques, Université de Nantes (UN)-Université de Nantes (UN), Biologie des Organismes et Ecosystèmes Aquatiques (BOREA), Université de Caen Normandie (UNICAEN), Normandie Université (NU)-Normandie Université (NU)-Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA), Instituto de Ecología y Biodiversidad, Biologie des organismes marins et écosystèmes (BOME), Muséum national d'Histoire naturelle (MNHN)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS), Scott Polar Research Institute, University of Cambridge UK (CAM), Functional Ecology, Alfred-Wegener-Institut, Helmholtz-Zentrum für Polar- und Meeresforschung = Alfred Wegener Institute for Polar and Marine Research = Institut Alfred-Wegener pour la recherche polaire et marine (AWI), Helmholtz-Gemeinschaft = Helmholtz Association-Helmholtz-Gemeinschaft = Helmholtz Association, Australian Antarctic Division (AAD), Australian Government, Department of the Environment and Energy, The Natural History Museum London (NHM), Institute of Oceanology, Polska Akademia Nauk = Polish Academy of Sciences = Académie polonaise des sciences (PAN), Department of Invertebrate Zoology, Smithsonian Institution-National Museum of Natural History, Museum Victoria, Museum Victoria Melbourne, Biologie 1, Universität Regensburg (UR), National Institute of Water and Atmospheric Research Wellington (NIWA), Department of Zoology
Format: Article in Journal/Newspaper
Language:English
Published: HAL CCSD 2011
Subjects:
Online Access:https://hal.science/hal-00614982
https://hal.science/hal-00614982/document
https://hal.science/hal-00614982/file/2011_Dettai_Polar%20Science_pr_DNA%20Barcoding%20and%20molecular%20systematics%20of%20the%20benthic%20and%20demersal%20organisms%20of%20the%20CEAMARC%20survey.pdf
https://doi.org/10.1016/j.polar.2011.02.002
id ftunivrennes1hal:oai:HAL:hal-00614982v1
record_format openpolar
institution Open Polar
collection Université de Rennes 1: Publications scientifiques (HAL)
op_collection_id ftunivrennes1hal
language English
topic Barcode
Cytochrome oxidase 1
CEAMARC
Taxonomy
Systematics
[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]
[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics
Phylogenetics and taxonomy
spellingShingle Barcode
Cytochrome oxidase 1
CEAMARC
Taxonomy
Systematics
[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]
[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics
Phylogenetics and taxonomy
Dettaï, Agnès
Adamowizc, Sarah J.
Allcock, Louise
Arango, Claudia P.
Barnes, David K.A.
Barratt, Iain
Chenuil, Anne
Couloux, Arnaud
Cruaud, Corinne
David, Bruno
Denis, Françoise
Denys, Gaël
Díaz, Angie
Eléaume, Marc
Féral, Jean-Pierre
Froger, Aurélie
Gallut, Cyril
Grant, Rachel
Griffiths, Huw J.
Held, Christoph
Hemery, Lenaïg G.
Hosie, Graham
Kuklinski, Piotr
Lecointre, Guillaume
Linse, Katrin
Lozouet, Pierre
Mah, Christopher
Monniot, Françoise
Norman, Mark D.
O'Hara, Timothy
Ozouf-Costaz, Catherine
Piedallu, Claire
Pierrat, Benjamin
Poulin, Elie
Puillandre, Nicolas
Riddle, Martin
Samadi, Sarah
Saucède, Thomas
Schubart, Christoph
Smith, Peter J.
Stevens, Darren W.
Steinke, Dirk
Strugnell, Jan M.
Tarnowska, Katarzyna
Wadley, Victoria
Améziane, Nadia
DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey.
topic_facet Barcode
Cytochrome oxidase 1
CEAMARC
Taxonomy
Systematics
[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]
[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics
Phylogenetics and taxonomy
description 15 pages International audience The Dumont d'Urville Sea (East Antarctic region) has been less investigated for DNA barcoding and molecular taxonomy than other parts of the Southern Ocean, such as the Ross Sea and the Antarctic Peninsula. The Collaborative East Antarctic MARine Census (CEAMARC) took place in this area during the austral summer of 2007e2008. The Australian vessel RSVAurora Australis collected very diverse samples of demersal and benthic organisms. The specimens were sorted centrally, and then distributed to taxonomic experts for molecular and morphological taxonomy and identification, especially barcoding. The COI sequences generated from CEAMARC material provide a sizeable proportion of the Census of Antarctic Marine Life barcodes although the studies are still ongoing, and represent the only source of sequences for a number of species. Barcoding appears to be a valuable method for identification within most groups, despite low divergences and haplotype sharing in a few species, and it is also useful as a preliminary taxonomic exploration method. Several new species are being described. CEAMARC samples have already provided new material for phylogeographic and phylogenetic studies in cephalopods, pycnogonids, teleost fish, crinoids and sea urchins, helping these studies to provide a better insight in the patterns of evolution in the Southern Ocean.
author2 Systématique, adaptation, évolution (SAE)
Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)
Canadian Centre for DNA Barcoding
University of Guelph
Martin Ryan Marine Science Institute
National University of Ireland Galway (NUI Galway)
School of Biological Sciences
Queen's University Belfast (QUB)
Natural Environments Program
Queensland Museum
British Antarctic Survey (BAS)
Natural Environment Research Council (NERC)
Diversité, évolution et écologie fonctionnelle marine (DIMAR)
Université de la Méditerranée - Aix-Marseille 2-Centre National de la Recherche Scientifique (CNRS)
Genoscope - Centre national de séquençage Evry (GENOSCOPE)
Université Paris-Saclay-Direction de Recherche Fondamentale (CEA) (DRF (CEA))
Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)
Biogéosciences UMR 6282 (BGS)
Université de Bourgogne (UB)-Centre National de la Recherche Scientifique (CNRS)
Mer, molécules et santé EA 2160 (MMS)
Le Mans Université (UM)-Université de Nantes - UFR des Sciences et des Techniques (UN UFR ST)
Université de Nantes (UN)-Université de Nantes (UN)-Université de Nantes - UFR des Sciences Pharmaceutiques et Biologiques
Université de Nantes (UN)-Université de Nantes (UN)
Biologie des Organismes et Ecosystèmes Aquatiques (BOREA)
Université de Caen Normandie (UNICAEN)
Normandie Université (NU)-Normandie Université (NU)-Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA)
Instituto de Ecología y Biodiversidad
Biologie des organismes marins et écosystèmes (BOME)
Muséum national d'Histoire naturelle (MNHN)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)
Scott Polar Research Institute
University of Cambridge UK (CAM)
Functional Ecology
Alfred-Wegener-Institut, Helmholtz-Zentrum für Polar- und Meeresforschung = Alfred Wegener Institute for Polar and Marine Research = Institut Alfred-Wegener pour la recherche polaire et marine (AWI)
Helmholtz-Gemeinschaft = Helmholtz Association-Helmholtz-Gemeinschaft = Helmholtz Association
Australian Antarctic Division (AAD)
Australian Government, Department of the Environment and Energy
The Natural History Museum London (NHM)
Institute of Oceanology
Polska Akademia Nauk = Polish Academy of Sciences = Académie polonaise des sciences (PAN)
Department of Invertebrate Zoology
Smithsonian Institution-National Museum of Natural History
Museum Victoria
Museum Victoria Melbourne
Biologie 1
Universität Regensburg (UR)
National Institute of Water and Atmospheric Research Wellington (NIWA)
Department of Zoology
format Article in Journal/Newspaper
author Dettaï, Agnès
Adamowizc, Sarah J.
Allcock, Louise
Arango, Claudia P.
Barnes, David K.A.
Barratt, Iain
Chenuil, Anne
Couloux, Arnaud
Cruaud, Corinne
David, Bruno
Denis, Françoise
Denys, Gaël
Díaz, Angie
Eléaume, Marc
Féral, Jean-Pierre
Froger, Aurélie
Gallut, Cyril
Grant, Rachel
Griffiths, Huw J.
Held, Christoph
Hemery, Lenaïg G.
Hosie, Graham
Kuklinski, Piotr
Lecointre, Guillaume
Linse, Katrin
Lozouet, Pierre
Mah, Christopher
Monniot, Françoise
Norman, Mark D.
O'Hara, Timothy
Ozouf-Costaz, Catherine
Piedallu, Claire
Pierrat, Benjamin
Poulin, Elie
Puillandre, Nicolas
Riddle, Martin
Samadi, Sarah
Saucède, Thomas
Schubart, Christoph
Smith, Peter J.
Stevens, Darren W.
Steinke, Dirk
Strugnell, Jan M.
Tarnowska, Katarzyna
Wadley, Victoria
Améziane, Nadia
author_facet Dettaï, Agnès
Adamowizc, Sarah J.
Allcock, Louise
Arango, Claudia P.
Barnes, David K.A.
Barratt, Iain
Chenuil, Anne
Couloux, Arnaud
Cruaud, Corinne
David, Bruno
Denis, Françoise
Denys, Gaël
Díaz, Angie
Eléaume, Marc
Féral, Jean-Pierre
Froger, Aurélie
Gallut, Cyril
Grant, Rachel
Griffiths, Huw J.
Held, Christoph
Hemery, Lenaïg G.
Hosie, Graham
Kuklinski, Piotr
Lecointre, Guillaume
Linse, Katrin
Lozouet, Pierre
Mah, Christopher
Monniot, Françoise
Norman, Mark D.
O'Hara, Timothy
Ozouf-Costaz, Catherine
Piedallu, Claire
Pierrat, Benjamin
Poulin, Elie
Puillandre, Nicolas
Riddle, Martin
Samadi, Sarah
Saucède, Thomas
Schubart, Christoph
Smith, Peter J.
Stevens, Darren W.
Steinke, Dirk
Strugnell, Jan M.
Tarnowska, Katarzyna
Wadley, Victoria
Améziane, Nadia
author_sort Dettaï, Agnès
title DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey.
title_short DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey.
title_full DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey.
title_fullStr DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey.
title_full_unstemmed DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey.
title_sort dna barcoding and molecular systematics of the benthic and demersal organisms of the ceamarc survey.
publisher HAL CCSD
publishDate 2011
url https://hal.science/hal-00614982
https://hal.science/hal-00614982/document
https://hal.science/hal-00614982/file/2011_Dettai_Polar%20Science_pr_DNA%20Barcoding%20and%20molecular%20systematics%20of%20the%20benthic%20and%20demersal%20organisms%20of%20the%20CEAMARC%20survey.pdf
https://doi.org/10.1016/j.polar.2011.02.002
genre Antarc*
Antarctic
Antarctic Peninsula
D'Urville Sea
Dumont D'Urville Sea
Polar Science
Polar Science
Ross Sea
Southern Ocean
genre_facet Antarc*
Antarctic
Antarctic Peninsula
D'Urville Sea
Dumont D'Urville Sea
Polar Science
Polar Science
Ross Sea
Southern Ocean
op_source ISSN: 1873-9652
Polar Science
https://hal.science/hal-00614982
Polar Science, 2011, 38 (8), pp.298-312. ⟨10.1016/j.polar.2011.02.002⟩
op_relation info:eu-repo/semantics/altIdentifier/doi/10.1016/j.polar.2011.02.002
hal-00614982
https://hal.science/hal-00614982
https://hal.science/hal-00614982/document
https://hal.science/hal-00614982/file/2011_Dettai_Polar%20Science_pr_DNA%20Barcoding%20and%20molecular%20systematics%20of%20the%20benthic%20and%20demersal%20organisms%20of%20the%20CEAMARC%20survey.pdf
doi:10.1016/j.polar.2011.02.002
op_rights info:eu-repo/semantics/OpenAccess
op_doi https://doi.org/10.1016/j.polar.2011.02.002
container_title Polar Science
container_volume 5
container_issue 2
container_start_page 298
op_container_end_page 312
_version_ 1797589106016911360
spelling ftunivrennes1hal:oai:HAL:hal-00614982v1 2024-04-28T07:57:32+00:00 DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey. Dettaï, Agnès Adamowizc, Sarah J. Allcock, Louise Arango, Claudia P. Barnes, David K.A. Barratt, Iain Chenuil, Anne Couloux, Arnaud Cruaud, Corinne David, Bruno Denis, Françoise Denys, Gaël Díaz, Angie Eléaume, Marc Féral, Jean-Pierre Froger, Aurélie Gallut, Cyril Grant, Rachel Griffiths, Huw J. Held, Christoph Hemery, Lenaïg G. Hosie, Graham Kuklinski, Piotr Lecointre, Guillaume Linse, Katrin Lozouet, Pierre Mah, Christopher Monniot, Françoise Norman, Mark D. O'Hara, Timothy Ozouf-Costaz, Catherine Piedallu, Claire Pierrat, Benjamin Poulin, Elie Puillandre, Nicolas Riddle, Martin Samadi, Sarah Saucède, Thomas Schubart, Christoph Smith, Peter J. Stevens, Darren W. Steinke, Dirk Strugnell, Jan M. Tarnowska, Katarzyna Wadley, Victoria Améziane, Nadia Systématique, adaptation, évolution (SAE) Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS) Canadian Centre for DNA Barcoding University of Guelph Martin Ryan Marine Science Institute National University of Ireland Galway (NUI Galway) School of Biological Sciences Queen's University Belfast (QUB) Natural Environments Program Queensland Museum British Antarctic Survey (BAS) Natural Environment Research Council (NERC) Diversité, évolution et écologie fonctionnelle marine (DIMAR) Université de la Méditerranée - Aix-Marseille 2-Centre National de la Recherche Scientifique (CNRS) Genoscope - Centre national de séquençage Evry (GENOSCOPE) Université Paris-Saclay-Direction de Recherche Fondamentale (CEA) (DRF (CEA)) Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA) Biogéosciences UMR 6282 (BGS) Université de Bourgogne (UB)-Centre National de la Recherche Scientifique (CNRS) Mer, molécules et santé EA 2160 (MMS) Le Mans Université (UM)-Université de Nantes - UFR des Sciences et des Techniques (UN UFR ST) Université de Nantes (UN)-Université de Nantes (UN)-Université de Nantes - UFR des Sciences Pharmaceutiques et Biologiques Université de Nantes (UN)-Université de Nantes (UN) Biologie des Organismes et Ecosystèmes Aquatiques (BOREA) Université de Caen Normandie (UNICAEN) Normandie Université (NU)-Normandie Université (NU)-Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA) Instituto de Ecología y Biodiversidad Biologie des organismes marins et écosystèmes (BOME) Muséum national d'Histoire naturelle (MNHN)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS) Scott Polar Research Institute University of Cambridge UK (CAM) Functional Ecology Alfred-Wegener-Institut, Helmholtz-Zentrum für Polar- und Meeresforschung = Alfred Wegener Institute for Polar and Marine Research = Institut Alfred-Wegener pour la recherche polaire et marine (AWI) Helmholtz-Gemeinschaft = Helmholtz Association-Helmholtz-Gemeinschaft = Helmholtz Association Australian Antarctic Division (AAD) Australian Government, Department of the Environment and Energy The Natural History Museum London (NHM) Institute of Oceanology Polska Akademia Nauk = Polish Academy of Sciences = Académie polonaise des sciences (PAN) Department of Invertebrate Zoology Smithsonian Institution-National Museum of Natural History Museum Victoria Museum Victoria Melbourne Biologie 1 Universität Regensburg (UR) National Institute of Water and Atmospheric Research Wellington (NIWA) Department of Zoology 2011-08 https://hal.science/hal-00614982 https://hal.science/hal-00614982/document https://hal.science/hal-00614982/file/2011_Dettai_Polar%20Science_pr_DNA%20Barcoding%20and%20molecular%20systematics%20of%20the%20benthic%20and%20demersal%20organisms%20of%20the%20CEAMARC%20survey.pdf https://doi.org/10.1016/j.polar.2011.02.002 en eng HAL CCSD Elsevier info:eu-repo/semantics/altIdentifier/doi/10.1016/j.polar.2011.02.002 hal-00614982 https://hal.science/hal-00614982 https://hal.science/hal-00614982/document https://hal.science/hal-00614982/file/2011_Dettai_Polar%20Science_pr_DNA%20Barcoding%20and%20molecular%20systematics%20of%20the%20benthic%20and%20demersal%20organisms%20of%20the%20CEAMARC%20survey.pdf doi:10.1016/j.polar.2011.02.002 info:eu-repo/semantics/OpenAccess ISSN: 1873-9652 Polar Science https://hal.science/hal-00614982 Polar Science, 2011, 38 (8), pp.298-312. ⟨10.1016/j.polar.2011.02.002⟩ Barcode Cytochrome oxidase 1 CEAMARC Taxonomy Systematics [SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE] [SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy info:eu-repo/semantics/article Journal articles 2011 ftunivrennes1hal https://doi.org/10.1016/j.polar.2011.02.002 2024-04-04T17:07:14Z 15 pages International audience The Dumont d'Urville Sea (East Antarctic region) has been less investigated for DNA barcoding and molecular taxonomy than other parts of the Southern Ocean, such as the Ross Sea and the Antarctic Peninsula. The Collaborative East Antarctic MARine Census (CEAMARC) took place in this area during the austral summer of 2007e2008. The Australian vessel RSVAurora Australis collected very diverse samples of demersal and benthic organisms. The specimens were sorted centrally, and then distributed to taxonomic experts for molecular and morphological taxonomy and identification, especially barcoding. The COI sequences generated from CEAMARC material provide a sizeable proportion of the Census of Antarctic Marine Life barcodes although the studies are still ongoing, and represent the only source of sequences for a number of species. Barcoding appears to be a valuable method for identification within most groups, despite low divergences and haplotype sharing in a few species, and it is also useful as a preliminary taxonomic exploration method. Several new species are being described. CEAMARC samples have already provided new material for phylogeographic and phylogenetic studies in cephalopods, pycnogonids, teleost fish, crinoids and sea urchins, helping these studies to provide a better insight in the patterns of evolution in the Southern Ocean. Article in Journal/Newspaper Antarc* Antarctic Antarctic Peninsula D'Urville Sea Dumont D'Urville Sea Polar Science Polar Science Ross Sea Southern Ocean Université de Rennes 1: Publications scientifiques (HAL) Polar Science 5 2 298 312