Using self-organizing maps to classify humpback whale song units and quantify their similarity

Classification of vocal signals can be undertaken using a wide variety of qualitative and quantitative techniques. Using east Australian humpback whale song from 2002 to 2014, a subset of vocal signals was acoustically measured and then classified using a Self-Organizing Map (SOM). The SOM created (...

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Published in:The Journal of the Acoustical Society of America
Main Authors: Allen, Jenny A., Murray, Anita, Noad, Michael J., Dunlop, Rebecca A., Garland, Ellen C.
Format: Article in Journal/Newspaper
Language:English
Published: A I P Publishing 2017
Subjects:
Online Access:https://espace.library.uq.edu.au/view/UQ:692212
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spelling ftunivqespace:oai:espace.library.uq.edu.au:UQ:692212 2023-05-15T16:35:55+02:00 Using self-organizing maps to classify humpback whale song units and quantify their similarity Allen, Jenny A. Murray, Anita Noad, Michael J. Dunlop, Rebecca A. Garland, Ellen C. 2017-10-01 https://espace.library.uq.edu.au/view/UQ:692212 eng eng A I P Publishing doi:10.1121/1.4982040 issn:0001-4966 issn:1520-8524 orcid:0000-0002-2799-8320 orcid:0000-0002-0427-6317 Not set Bottle-Nosed Dolphins Megaptera-Novaeangliae Classification Vocalizations Information Repertoire Communication Animals Signals Scale 1201 Arts and Humanities (miscellaneous) 3102 Acoustics and Ultrasonics Journal Article 2017 ftunivqespace https://doi.org/10.1121/1.4982040 2020-12-08T02:23:54Z Classification of vocal signals can be undertaken using a wide variety of qualitative and quantitative techniques. Using east Australian humpback whale song from 2002 to 2014, a subset of vocal signals was acoustically measured and then classified using a Self-Organizing Map (SOM). The SOM created (1) an acoustic dictionary of units representing the song's repertoire, and (2) Cartesian distance measurements among all unit types (SOM nodes). Utilizing the SOM dictionary as a guide, additional song recordings from east Australia were rapidly (manually) transcribed. To assess the similarity in song sequences, the Cartesian distance output from the SOM was applied in Levenshtein distance similarity analyses as a weighting factor to better incorporate unit similarity in the calculation (previously a qualitative process). SOMs provide a more robust and repeatable means of categorizing acoustic signals along with a clear quantitative measurement of sound type similarity based on acoustic features. This method can be utilized for a wide variety of acoustic databases especially those containing very large datasets and can be applied across the vocalization research community to help address concerns surrounding inconsistency in manual classification. (C) 2017 Acoustical Society of America. Article in Journal/Newspaper Humpback Whale Megaptera novaeangliae The University of Queensland: UQ eSpace The Journal of the Acoustical Society of America 142 4 1943 1952
institution Open Polar
collection The University of Queensland: UQ eSpace
op_collection_id ftunivqespace
language English
topic Bottle-Nosed Dolphins
Megaptera-Novaeangliae
Classification
Vocalizations
Information
Repertoire
Communication
Animals
Signals
Scale
1201 Arts and Humanities (miscellaneous)
3102 Acoustics and Ultrasonics
spellingShingle Bottle-Nosed Dolphins
Megaptera-Novaeangliae
Classification
Vocalizations
Information
Repertoire
Communication
Animals
Signals
Scale
1201 Arts and Humanities (miscellaneous)
3102 Acoustics and Ultrasonics
Allen, Jenny A.
Murray, Anita
Noad, Michael J.
Dunlop, Rebecca A.
Garland, Ellen C.
Using self-organizing maps to classify humpback whale song units and quantify their similarity
topic_facet Bottle-Nosed Dolphins
Megaptera-Novaeangliae
Classification
Vocalizations
Information
Repertoire
Communication
Animals
Signals
Scale
1201 Arts and Humanities (miscellaneous)
3102 Acoustics and Ultrasonics
description Classification of vocal signals can be undertaken using a wide variety of qualitative and quantitative techniques. Using east Australian humpback whale song from 2002 to 2014, a subset of vocal signals was acoustically measured and then classified using a Self-Organizing Map (SOM). The SOM created (1) an acoustic dictionary of units representing the song's repertoire, and (2) Cartesian distance measurements among all unit types (SOM nodes). Utilizing the SOM dictionary as a guide, additional song recordings from east Australia were rapidly (manually) transcribed. To assess the similarity in song sequences, the Cartesian distance output from the SOM was applied in Levenshtein distance similarity analyses as a weighting factor to better incorporate unit similarity in the calculation (previously a qualitative process). SOMs provide a more robust and repeatable means of categorizing acoustic signals along with a clear quantitative measurement of sound type similarity based on acoustic features. This method can be utilized for a wide variety of acoustic databases especially those containing very large datasets and can be applied across the vocalization research community to help address concerns surrounding inconsistency in manual classification. (C) 2017 Acoustical Society of America.
format Article in Journal/Newspaper
author Allen, Jenny A.
Murray, Anita
Noad, Michael J.
Dunlop, Rebecca A.
Garland, Ellen C.
author_facet Allen, Jenny A.
Murray, Anita
Noad, Michael J.
Dunlop, Rebecca A.
Garland, Ellen C.
author_sort Allen, Jenny A.
title Using self-organizing maps to classify humpback whale song units and quantify their similarity
title_short Using self-organizing maps to classify humpback whale song units and quantify their similarity
title_full Using self-organizing maps to classify humpback whale song units and quantify their similarity
title_fullStr Using self-organizing maps to classify humpback whale song units and quantify their similarity
title_full_unstemmed Using self-organizing maps to classify humpback whale song units and quantify their similarity
title_sort using self-organizing maps to classify humpback whale song units and quantify their similarity
publisher A I P Publishing
publishDate 2017
url https://espace.library.uq.edu.au/view/UQ:692212
genre Humpback Whale
Megaptera novaeangliae
genre_facet Humpback Whale
Megaptera novaeangliae
op_relation doi:10.1121/1.4982040
issn:0001-4966
issn:1520-8524
orcid:0000-0002-2799-8320
orcid:0000-0002-0427-6317
Not set
op_doi https://doi.org/10.1121/1.4982040
container_title The Journal of the Acoustical Society of America
container_volume 142
container_issue 4
container_start_page 1943
op_container_end_page 1952
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