Genetically effective population sizes of Antarctic seals estimated from nuclear genes

We analyzed eight nuclear microsatellite loci in three species of Antarctic seals; Weddell seal (Leptonychotes weddellii; mean N = 163), crabeater seal (Lobodon carcinophaga; 138) and Ross seal (Ommatophoca rossii; 35). We estimated genetic diversity (Θ) and effective population size (N ) for each s...

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Published in:Conservation Genetics
Main Authors: Curtis, Caitlin, Stewart, Brent S., Karl, Stephen A.
Format: Article in Journal/Newspaper
Language:English
Published: Springer Netherlands 2011
Subjects:
Online Access:https://espace.library.uq.edu.au/view/UQ:382912
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spelling ftunivqespace:oai:espace.library.uq.edu.au:UQ:382912 2023-05-15T13:39:41+02:00 Genetically effective population sizes of Antarctic seals estimated from nuclear genes Curtis, Caitlin Stewart, Brent S. Karl, Stephen A. 2011-12-01 https://espace.library.uq.edu.au/view/UQ:382912 eng eng Springer Netherlands doi:10.1007/s10592-011-0241-x issn:1566-0621 issn:1572-9737 orcid:0000-0002-6284-284X 98-16011 Leptonychotes weddellii Lobodon carcinophaga Microsatellite Ommatophoca rossii Phocid carnivore Theta 1105 Ecology Evolution Behavior and Systematics 1311 Genetics Journal Article 2011 ftunivqespace https://doi.org/10.1007/s10592-011-0241-x 2020-10-06T00:50:01Z We analyzed eight nuclear microsatellite loci in three species of Antarctic seals; Weddell seal (Leptonychotes weddellii; mean N = 163), crabeater seal (Lobodon carcinophaga; 138) and Ross seal (Ommatophoca rossii; 35). We estimated genetic diversity (Θ) and effective population size (N ) for each species. Autosomal microsatellite based N estimates were 151,200 for Weddell seals, 880,200 for crabeater seals, and 254,500 for Ross seals. We screened one X-linked microsatellite (Lw18), which yielded similar N estimates to the autosomal loci for all species except the Ross seals, where it was considerably larger (~103 times). Microsatellite N estimates were comparable with previously published N estimates from mitochondrial DNA, but both are substantially lower than direct estimates of population size in all species except the Ross seals. The ratio of maternally versus biparentally derived estimates of N for Ross seals was not consistent with the hypothesis that they are a polygynous species. We found no sign of a recent, sustained genetic bottleneck in any of the species. Article in Journal/Newspaper Antarc* Antarctic Crabeater Seal Crabeater Seals Ross Seal Weddell Seal Weddell Seals The University of Queensland: UQ eSpace Antarctic Weddell Conservation Genetics 12 6 1435 1446
institution Open Polar
collection The University of Queensland: UQ eSpace
op_collection_id ftunivqespace
language English
topic Leptonychotes weddellii
Lobodon carcinophaga
Microsatellite
Ommatophoca rossii
Phocid carnivore
Theta
1105 Ecology
Evolution
Behavior and Systematics
1311 Genetics
spellingShingle Leptonychotes weddellii
Lobodon carcinophaga
Microsatellite
Ommatophoca rossii
Phocid carnivore
Theta
1105 Ecology
Evolution
Behavior and Systematics
1311 Genetics
Curtis, Caitlin
Stewart, Brent S.
Karl, Stephen A.
Genetically effective population sizes of Antarctic seals estimated from nuclear genes
topic_facet Leptonychotes weddellii
Lobodon carcinophaga
Microsatellite
Ommatophoca rossii
Phocid carnivore
Theta
1105 Ecology
Evolution
Behavior and Systematics
1311 Genetics
description We analyzed eight nuclear microsatellite loci in three species of Antarctic seals; Weddell seal (Leptonychotes weddellii; mean N = 163), crabeater seal (Lobodon carcinophaga; 138) and Ross seal (Ommatophoca rossii; 35). We estimated genetic diversity (Θ) and effective population size (N ) for each species. Autosomal microsatellite based N estimates were 151,200 for Weddell seals, 880,200 for crabeater seals, and 254,500 for Ross seals. We screened one X-linked microsatellite (Lw18), which yielded similar N estimates to the autosomal loci for all species except the Ross seals, where it was considerably larger (~103 times). Microsatellite N estimates were comparable with previously published N estimates from mitochondrial DNA, but both are substantially lower than direct estimates of population size in all species except the Ross seals. The ratio of maternally versus biparentally derived estimates of N for Ross seals was not consistent with the hypothesis that they are a polygynous species. We found no sign of a recent, sustained genetic bottleneck in any of the species.
format Article in Journal/Newspaper
author Curtis, Caitlin
Stewart, Brent S.
Karl, Stephen A.
author_facet Curtis, Caitlin
Stewart, Brent S.
Karl, Stephen A.
author_sort Curtis, Caitlin
title Genetically effective population sizes of Antarctic seals estimated from nuclear genes
title_short Genetically effective population sizes of Antarctic seals estimated from nuclear genes
title_full Genetically effective population sizes of Antarctic seals estimated from nuclear genes
title_fullStr Genetically effective population sizes of Antarctic seals estimated from nuclear genes
title_full_unstemmed Genetically effective population sizes of Antarctic seals estimated from nuclear genes
title_sort genetically effective population sizes of antarctic seals estimated from nuclear genes
publisher Springer Netherlands
publishDate 2011
url https://espace.library.uq.edu.au/view/UQ:382912
geographic Antarctic
Weddell
geographic_facet Antarctic
Weddell
genre Antarc*
Antarctic
Crabeater Seal
Crabeater Seals
Ross Seal
Weddell Seal
Weddell Seals
genre_facet Antarc*
Antarctic
Crabeater Seal
Crabeater Seals
Ross Seal
Weddell Seal
Weddell Seals
op_relation doi:10.1007/s10592-011-0241-x
issn:1566-0621
issn:1572-9737
orcid:0000-0002-6284-284X
98-16011
op_doi https://doi.org/10.1007/s10592-011-0241-x
container_title Conservation Genetics
container_volume 12
container_issue 6
container_start_page 1435
op_container_end_page 1446
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