Empirical methods for the estimation of Southern Ocean CO2 : support vector and random forest regression

The Southern Ocean accounts for 40 % of oceanic CO2 uptake, but the estimates are bound by large uncertainties due to a paucity in observations. Gap-filling empirical methods have been used to good effect to approximate pCO2 from satellite observable variables in other parts of the ocean, but many o...

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Published in:Biogeosciences
Main Authors: Gregor, Luke, Kok, Schalk, Monteiro, Pedro M.S.
Format: Article in Journal/Newspaper
Language:English
Published: European Geosciences Union 2017
Subjects:
Online Access:http://hdl.handle.net/2263/65745
https://doi.org/10.5194/bg-14-5551-2017
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record_format openpolar
spelling ftunivpretoria:oai:repository.up.ac.za:2263/65745 2023-05-15T18:24:34+02:00 Empirical methods for the estimation of Southern Ocean CO2 : support vector and random forest regression Gregor, Luke Kok, Schalk Monteiro, Pedro M.S. 2017-12-08 http://hdl.handle.net/2263/65745 https://doi.org/10.5194/bg-14-5551-2017 en eng European Geosciences Union http://hdl.handle.net/2263/65745 Gregor, L., Kok, S., and Monteiro, P. M. S.: Empirical methods for the estimation of Southern Ocean CO2: support vector and random forest regression, Biogeosciences, 14, 5551-5569, https://doi.org/10.5194/bg-14-5551-2017, 2017. 1726-4170 (print) 1726-4186 (online) doi:10.5194/bg-14-5551-2017 © Author(s) 2017. This work is distributed under the Creative Commons Attribution 3.0 License. CC-BY Southern Ocean Support vector regression (SVR) Random forest regression (RFR) Self-organizing map–feed-forward neural network (SOM-FFN) Surface Ocean CO2 Atlas (SOCAT) Article 2017 ftunivpretoria https://doi.org/10.5194/bg-14-5551-2017 2022-05-31T13:28:19Z The Southern Ocean accounts for 40 % of oceanic CO2 uptake, but the estimates are bound by large uncertainties due to a paucity in observations. Gap-filling empirical methods have been used to good effect to approximate pCO2 from satellite observable variables in other parts of the ocean, but many of these methods are not in agreement in the Southern Ocean. In this study we propose two additional methods that perform well in the Southern Ocean: support vector regression (SVR) and random forest regression (RFR). The methods are used to estimate ΔpCO2 in the Southern Ocean based on SOCAT v3, achieving similar trends to the SOM-FFN method by Landschützer et al. (2014). Results show that the SOM-FFN and RFR approaches have RMSEs of similar magnitude (14.84 and 16.45 µatm, where 1 atm = 101 325 Pa) where the SVR method has a larger RMSE (24.40 µatm). However, the larger errors for SVR and RFR are, in part, due to an increase in coastal observations from SOCAT v2 to v3, where the SOM-FFN method used v2 data. The success of both SOM-FFN and RFR depends on the ability to adapt to different modes of variability. The SOM-FFN achieves this by having independent regression models for each cluster, while this flexibility is intrinsic to the RFR method. Analyses of the estimates shows that the SVR and RFR's respective sensitivity and robustness to outliers define the outcome significantly. Further analyses on the methods were performed by using a synthetic dataset to assess the following: which method (RFR or SVR) has the best performance? What is the effect of using time, latitude and longitude as proxy variables on ΔpCO2? What is the impact of the sampling bias in the SOCAT v3 dataset on the estimates? We find that while RFR is indeed better than SVR, the ensemble of the two methods outperforms either one, due to complementary strengths and weaknesses of the methods. Results also show that for the RFR and SVR implementations, it is better to include coordinates as proxy variables as RMSE scores are lowered and the phasing ... Article in Journal/Newspaper Southern Ocean University of Pretoria: UPSpace Southern Ocean Biogeosciences 14 23 5551 5569
institution Open Polar
collection University of Pretoria: UPSpace
op_collection_id ftunivpretoria
language English
topic Southern Ocean
Support vector regression (SVR)
Random forest regression (RFR)
Self-organizing map–feed-forward neural network (SOM-FFN)
Surface Ocean CO2 Atlas (SOCAT)
spellingShingle Southern Ocean
Support vector regression (SVR)
Random forest regression (RFR)
Self-organizing map–feed-forward neural network (SOM-FFN)
Surface Ocean CO2 Atlas (SOCAT)
Gregor, Luke
Kok, Schalk
Monteiro, Pedro M.S.
Empirical methods for the estimation of Southern Ocean CO2 : support vector and random forest regression
topic_facet Southern Ocean
Support vector regression (SVR)
Random forest regression (RFR)
Self-organizing map–feed-forward neural network (SOM-FFN)
Surface Ocean CO2 Atlas (SOCAT)
description The Southern Ocean accounts for 40 % of oceanic CO2 uptake, but the estimates are bound by large uncertainties due to a paucity in observations. Gap-filling empirical methods have been used to good effect to approximate pCO2 from satellite observable variables in other parts of the ocean, but many of these methods are not in agreement in the Southern Ocean. In this study we propose two additional methods that perform well in the Southern Ocean: support vector regression (SVR) and random forest regression (RFR). The methods are used to estimate ΔpCO2 in the Southern Ocean based on SOCAT v3, achieving similar trends to the SOM-FFN method by Landschützer et al. (2014). Results show that the SOM-FFN and RFR approaches have RMSEs of similar magnitude (14.84 and 16.45 µatm, where 1 atm = 101 325 Pa) where the SVR method has a larger RMSE (24.40 µatm). However, the larger errors for SVR and RFR are, in part, due to an increase in coastal observations from SOCAT v2 to v3, where the SOM-FFN method used v2 data. The success of both SOM-FFN and RFR depends on the ability to adapt to different modes of variability. The SOM-FFN achieves this by having independent regression models for each cluster, while this flexibility is intrinsic to the RFR method. Analyses of the estimates shows that the SVR and RFR's respective sensitivity and robustness to outliers define the outcome significantly. Further analyses on the methods were performed by using a synthetic dataset to assess the following: which method (RFR or SVR) has the best performance? What is the effect of using time, latitude and longitude as proxy variables on ΔpCO2? What is the impact of the sampling bias in the SOCAT v3 dataset on the estimates? We find that while RFR is indeed better than SVR, the ensemble of the two methods outperforms either one, due to complementary strengths and weaknesses of the methods. Results also show that for the RFR and SVR implementations, it is better to include coordinates as proxy variables as RMSE scores are lowered and the phasing ...
format Article in Journal/Newspaper
author Gregor, Luke
Kok, Schalk
Monteiro, Pedro M.S.
author_facet Gregor, Luke
Kok, Schalk
Monteiro, Pedro M.S.
author_sort Gregor, Luke
title Empirical methods for the estimation of Southern Ocean CO2 : support vector and random forest regression
title_short Empirical methods for the estimation of Southern Ocean CO2 : support vector and random forest regression
title_full Empirical methods for the estimation of Southern Ocean CO2 : support vector and random forest regression
title_fullStr Empirical methods for the estimation of Southern Ocean CO2 : support vector and random forest regression
title_full_unstemmed Empirical methods for the estimation of Southern Ocean CO2 : support vector and random forest regression
title_sort empirical methods for the estimation of southern ocean co2 : support vector and random forest regression
publisher European Geosciences Union
publishDate 2017
url http://hdl.handle.net/2263/65745
https://doi.org/10.5194/bg-14-5551-2017
geographic Southern Ocean
geographic_facet Southern Ocean
genre Southern Ocean
genre_facet Southern Ocean
op_relation http://hdl.handle.net/2263/65745
Gregor, L., Kok, S., and Monteiro, P. M. S.: Empirical methods for the estimation of Southern Ocean CO2: support vector and random forest regression, Biogeosciences, 14, 5551-5569, https://doi.org/10.5194/bg-14-5551-2017, 2017.
1726-4170 (print)
1726-4186 (online)
doi:10.5194/bg-14-5551-2017
op_rights © Author(s) 2017. This work is distributed under the Creative Commons Attribution 3.0 License.
op_rightsnorm CC-BY
op_doi https://doi.org/10.5194/bg-14-5551-2017
container_title Biogeosciences
container_volume 14
container_issue 23
container_start_page 5551
op_container_end_page 5569
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