Ancient DNA Enables Timing of the Pleistocene Origin and Holocene Expansion of Two Adélie Penguin Lineages in Antarctica

The timing of divergent events in history is one of the central goals of contemporary evolutionary biology. Such studies are however dependent on accurate evolutionary rates. Recent developments in ancient DNA analysis enable the estimation of more accurate evolutionary rates and therefore more accu...

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Published in:Molecular Biology and Evolution
Main Authors: RITCHIE P. A, MILLAR C. D, GIBB G. C, LAMBERT D. M., BARONI, CARLO
Other Authors: RITCHIE P., A, MILLAR C., D, GIBB G., C, Baroni, Carlo, Lambert, D. M.
Format: Article in Journal/Newspaper
Language:English
Published: 2004
Subjects:
Online Access:http://hdl.handle.net/11568/91431
https://doi.org/10.1093/molbev/msh012
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spelling ftunivpisairis:oai:arpi.unipi.it:11568/91431 2024-02-11T09:56:30+01:00 Ancient DNA Enables Timing of the Pleistocene Origin and Holocene Expansion of Two Adélie Penguin Lineages in Antarctica RITCHIE P. A MILLAR C. D GIBB G. C LAMBERT D. M. BARONI, CARLO RITCHIE P., A MILLAR C., D GIBB G., C Baroni, Carlo Lambert, D. M. 2004 STAMPA http://hdl.handle.net/11568/91431 https://doi.org/10.1093/molbev/msh012 eng eng info:eu-repo/semantics/altIdentifier/wos/WOS:000220083300006 volume:21 issue:1 firstpage:240 lastpage:248 numberofpages:9 journal:MOLECULAR BIOLOGY AND EVOLUTION http://hdl.handle.net/11568/91431 doi:10.1093/molbev/msh012 info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-1542316934 molecular clock phylogeography control region Bayesian inference rate heterogeneity Adélie Penguin Pygoscelis adeliae Relict penguin colonie Ross Sea Antarctica info:eu-repo/semantics/article 2004 ftunivpisairis https://doi.org/10.1093/molbev/msh012 2024-01-17T17:43:26Z The timing of divergent events in history is one of the central goals of contemporary evolutionary biology. Such studies are however dependent on accurate evolutionary rates. Recent developments in ancient DNA analysis enable the estimation of more accurate evolutionary rates and therefore more accurate timing of divergence events. Consequently, this leads to a better understanding of changes in populations through time. We use an evolutionary rate calculated from ancient DNA of Ade´lie penguins (Pygoscelis adeliae) to time divergent events in their history. We report the presence of two distinct and highly variable mitochondrial DNA lineages and track changes in these lineages through space and time. When the ancient DNA and the phylogenetic rates are used to estimate the time of origin of the lineages, two very different estimates resulted. In addition, these same rates provide very different estimates of the time of expansion of these lineages. We suggest that the rate calculated from ancient DNA is more consistent with the glacial history of Antarctica and requires fewer assumptions than does a narrative based on the phylogenetic rate. Finally, we suggest that our study indicates an important new role for ancient DNA studies in the timing of divergent events in history. Article in Journal/Newspaper Antarc* Antarctica Pygoscelis adeliae Ross Sea ARPI - Archivio della Ricerca dell'Università di Pisa Ross Sea Molecular Biology and Evolution 21 2 240 248
institution Open Polar
collection ARPI - Archivio della Ricerca dell'Università di Pisa
op_collection_id ftunivpisairis
language English
topic molecular clock
phylogeography
control region
Bayesian inference
rate heterogeneity
Adélie Penguin
Pygoscelis adeliae
Relict penguin colonie
Ross Sea
Antarctica
spellingShingle molecular clock
phylogeography
control region
Bayesian inference
rate heterogeneity
Adélie Penguin
Pygoscelis adeliae
Relict penguin colonie
Ross Sea
Antarctica
RITCHIE P. A
MILLAR C. D
GIBB G. C
LAMBERT D. M.
BARONI, CARLO
Ancient DNA Enables Timing of the Pleistocene Origin and Holocene Expansion of Two Adélie Penguin Lineages in Antarctica
topic_facet molecular clock
phylogeography
control region
Bayesian inference
rate heterogeneity
Adélie Penguin
Pygoscelis adeliae
Relict penguin colonie
Ross Sea
Antarctica
description The timing of divergent events in history is one of the central goals of contemporary evolutionary biology. Such studies are however dependent on accurate evolutionary rates. Recent developments in ancient DNA analysis enable the estimation of more accurate evolutionary rates and therefore more accurate timing of divergence events. Consequently, this leads to a better understanding of changes in populations through time. We use an evolutionary rate calculated from ancient DNA of Ade´lie penguins (Pygoscelis adeliae) to time divergent events in their history. We report the presence of two distinct and highly variable mitochondrial DNA lineages and track changes in these lineages through space and time. When the ancient DNA and the phylogenetic rates are used to estimate the time of origin of the lineages, two very different estimates resulted. In addition, these same rates provide very different estimates of the time of expansion of these lineages. We suggest that the rate calculated from ancient DNA is more consistent with the glacial history of Antarctica and requires fewer assumptions than does a narrative based on the phylogenetic rate. Finally, we suggest that our study indicates an important new role for ancient DNA studies in the timing of divergent events in history.
author2 RITCHIE P., A
MILLAR C., D
GIBB G., C
Baroni, Carlo
Lambert, D. M.
format Article in Journal/Newspaper
author RITCHIE P. A
MILLAR C. D
GIBB G. C
LAMBERT D. M.
BARONI, CARLO
author_facet RITCHIE P. A
MILLAR C. D
GIBB G. C
LAMBERT D. M.
BARONI, CARLO
author_sort RITCHIE P. A
title Ancient DNA Enables Timing of the Pleistocene Origin and Holocene Expansion of Two Adélie Penguin Lineages in Antarctica
title_short Ancient DNA Enables Timing of the Pleistocene Origin and Holocene Expansion of Two Adélie Penguin Lineages in Antarctica
title_full Ancient DNA Enables Timing of the Pleistocene Origin and Holocene Expansion of Two Adélie Penguin Lineages in Antarctica
title_fullStr Ancient DNA Enables Timing of the Pleistocene Origin and Holocene Expansion of Two Adélie Penguin Lineages in Antarctica
title_full_unstemmed Ancient DNA Enables Timing of the Pleistocene Origin and Holocene Expansion of Two Adélie Penguin Lineages in Antarctica
title_sort ancient dna enables timing of the pleistocene origin and holocene expansion of two adélie penguin lineages in antarctica
publishDate 2004
url http://hdl.handle.net/11568/91431
https://doi.org/10.1093/molbev/msh012
geographic Ross Sea
geographic_facet Ross Sea
genre Antarc*
Antarctica
Pygoscelis adeliae
Ross Sea
genre_facet Antarc*
Antarctica
Pygoscelis adeliae
Ross Sea
op_relation info:eu-repo/semantics/altIdentifier/wos/WOS:000220083300006
volume:21
issue:1
firstpage:240
lastpage:248
numberofpages:9
journal:MOLECULAR BIOLOGY AND EVOLUTION
http://hdl.handle.net/11568/91431
doi:10.1093/molbev/msh012
info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-1542316934
op_doi https://doi.org/10.1093/molbev/msh012
container_title Molecular Biology and Evolution
container_volume 21
container_issue 2
container_start_page 240
op_container_end_page 248
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