Automatic classification of acoustically detected krill aggregations: A case study from Southern Ocean

Acoustic surveys represent the standard methodology to assess the spatial distribution and abundance of pelagic organisms characterized by aggregative behaviour. The species identification of acoustically observed aggregations is usually performed by taking into account the biological sampling and a...

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Published in:Environmental Modelling & Software
Main Authors: Fontana, Ignazio, Barra, Marco, Bonanno, Angelo, Giacalone, Giovanni, Rizzo, Riccardo, Mangoni, Olga, Genovese, Simona, Basilone, Gualtiero, Ferreri, Rosalia, Mazzola, Salvatore, Lo Bosco, Giosué, Aronica, Salvatore
Format: Article in Journal/Newspaper
Language:English
Published: 2022
Subjects:
Online Access:http://hdl.handle.net/10447/537375
https://doi.org/10.1016/j.envsoft.2022.105357
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author Fontana, Ignazio
Barra, Marco
Bonanno, Angelo
Giacalone, Giovanni
Rizzo, Riccardo
Mangoni, Olga
Genovese, Simona
Basilone, Gualtiero
Ferreri, Rosalia
Mazzola, Salvatore
Lo Bosco, Giosué
Aronica, Salvatore
author2 Fontana, Ignazio
Barra, Marco
Bonanno, Angelo
Giacalone, Giovanni
Rizzo, Riccardo
Mangoni, Olga
Genovese, Simona
Basilone, Gualtiero
Ferreri, Rosalia
Mazzola, Salvatore
Lo Bosco, Giosué
Aronica, Salvatore
author_facet Fontana, Ignazio
Barra, Marco
Bonanno, Angelo
Giacalone, Giovanni
Rizzo, Riccardo
Mangoni, Olga
Genovese, Simona
Basilone, Gualtiero
Ferreri, Rosalia
Mazzola, Salvatore
Lo Bosco, Giosué
Aronica, Salvatore
author_sort Fontana, Ignazio
collection Unknown
container_start_page 105357
container_title Environmental Modelling & Software
container_volume 151
description Acoustic surveys represent the standard methodology to assess the spatial distribution and abundance of pelagic organisms characterized by aggregative behaviour. The species identification of acoustically observed aggregations is usually performed by taking into account the biological sampling and according to expert-based knowledge. The precision of survey estimates, such as total abundance and spatial distribution, strongly depends on the efficiency of acoustic and biological sampling as well as on the species identification. In this context, the automatic identification of specific groups based on energetic and morphological features could improve the species identification process, allowing to improve the precision of survey estimates or to overcome problems related to biases in biological sampling. In the present study, we test the use of well-known unsupervised clustering methods focusing on two important krill species namely Euphausia superba and Euphausia crystallorophias. In order to obtain a reference classification, the observed echoes were first classified according to specific criteria based on two parameters accounting for the acoustic response at 38 kHz and 120kHz. Different clustering methods combined with three distance metrics were then tested working on a wider set of parameters, accounting for the depth of insonified aggregation as well as for energetic and morphological features. The clustering performances were then evaluated by comparing the reference classification to the one obtained by clustering. Obtained results showed that the k-means performs better than the considered hierarchical methods. Our findings also evidenced that working on a specific set of variables rather than on all available ones highly impact k-means performances.
format Article in Journal/Newspaper
genre Euphausia superba
Ross Sea
Southern Ocean
genre_facet Euphausia superba
Ross Sea
Southern Ocean
geographic Ross Sea
Southern Ocean
geographic_facet Ross Sea
Southern Ocean
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institution Open Polar
language English
op_collection_id ftunivpalermo
op_doi https://doi.org/10.1016/j.envsoft.2022.105357
op_relation info:eu-repo/semantics/altIdentifier/wos/WOS:000787232600005
firstpage:1
lastpage:10
numberofpages:10
journal:ENVIRONMENTAL MODELLING & SOFTWARE
http://hdl.handle.net/10447/537375
doi:10.1016/j.envsoft.2022.105357
op_rights info:eu-repo/semantics/openAccess
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spelling ftunivpalermo:oai:iris.unipa.it:10447/537375 2025-06-15T14:26:31+00:00 Automatic classification of acoustically detected krill aggregations: A case study from Southern Ocean Fontana, Ignazio Barra, Marco Bonanno, Angelo Giacalone, Giovanni Rizzo, Riccardo Mangoni, Olga Genovese, Simona Basilone, Gualtiero Ferreri, Rosalia Mazzola, Salvatore Lo Bosco, Giosué Aronica, Salvatore Fontana, Ignazio Barra, Marco Bonanno, Angelo Giacalone, Giovanni Rizzo, Riccardo Mangoni, Olga Genovese, Simona Basilone, Gualtiero Ferreri, Rosalia Mazzola, Salvatore Lo Bosco, Giosué Aronica, Salvatore 2022-05 http://hdl.handle.net/10447/537375 https://doi.org/10.1016/j.envsoft.2022.105357 eng eng info:eu-repo/semantics/altIdentifier/wos/WOS:000787232600005 firstpage:1 lastpage:10 numberofpages:10 journal:ENVIRONMENTAL MODELLING & SOFTWARE http://hdl.handle.net/10447/537375 doi:10.1016/j.envsoft.2022.105357 info:eu-repo/semantics/openAccess Hierarchical clustering k-means Krill Ross Sea Internal validation indices Acoustic Settore INF/01 - Informatica Settore ING-INF/05 - Sistemi Di Elaborazione Delle Informazioni info:eu-repo/semantics/article 2022 ftunivpalermo https://doi.org/10.1016/j.envsoft.2022.105357 2025-05-26T04:52:23Z Acoustic surveys represent the standard methodology to assess the spatial distribution and abundance of pelagic organisms characterized by aggregative behaviour. The species identification of acoustically observed aggregations is usually performed by taking into account the biological sampling and according to expert-based knowledge. The precision of survey estimates, such as total abundance and spatial distribution, strongly depends on the efficiency of acoustic and biological sampling as well as on the species identification. In this context, the automatic identification of specific groups based on energetic and morphological features could improve the species identification process, allowing to improve the precision of survey estimates or to overcome problems related to biases in biological sampling. In the present study, we test the use of well-known unsupervised clustering methods focusing on two important krill species namely Euphausia superba and Euphausia crystallorophias. In order to obtain a reference classification, the observed echoes were first classified according to specific criteria based on two parameters accounting for the acoustic response at 38 kHz and 120kHz. Different clustering methods combined with three distance metrics were then tested working on a wider set of parameters, accounting for the depth of insonified aggregation as well as for energetic and morphological features. The clustering performances were then evaluated by comparing the reference classification to the one obtained by clustering. Obtained results showed that the k-means performs better than the considered hierarchical methods. Our findings also evidenced that working on a specific set of variables rather than on all available ones highly impact k-means performances. Article in Journal/Newspaper Euphausia superba Ross Sea Southern Ocean Unknown Ross Sea Southern Ocean Environmental Modelling & Software 151 105357
spellingShingle Hierarchical clustering
k-means
Krill
Ross Sea
Internal validation indices
Acoustic
Settore INF/01 - Informatica
Settore ING-INF/05 - Sistemi Di Elaborazione Delle Informazioni
Fontana, Ignazio
Barra, Marco
Bonanno, Angelo
Giacalone, Giovanni
Rizzo, Riccardo
Mangoni, Olga
Genovese, Simona
Basilone, Gualtiero
Ferreri, Rosalia
Mazzola, Salvatore
Lo Bosco, Giosué
Aronica, Salvatore
Automatic classification of acoustically detected krill aggregations: A case study from Southern Ocean
title Automatic classification of acoustically detected krill aggregations: A case study from Southern Ocean
title_full Automatic classification of acoustically detected krill aggregations: A case study from Southern Ocean
title_fullStr Automatic classification of acoustically detected krill aggregations: A case study from Southern Ocean
title_full_unstemmed Automatic classification of acoustically detected krill aggregations: A case study from Southern Ocean
title_short Automatic classification of acoustically detected krill aggregations: A case study from Southern Ocean
title_sort automatic classification of acoustically detected krill aggregations: a case study from southern ocean
topic Hierarchical clustering
k-means
Krill
Ross Sea
Internal validation indices
Acoustic
Settore INF/01 - Informatica
Settore ING-INF/05 - Sistemi Di Elaborazione Delle Informazioni
topic_facet Hierarchical clustering
k-means
Krill
Ross Sea
Internal validation indices
Acoustic
Settore INF/01 - Informatica
Settore ING-INF/05 - Sistemi Di Elaborazione Delle Informazioni
url http://hdl.handle.net/10447/537375
https://doi.org/10.1016/j.envsoft.2022.105357