Automatic classification of acoustically detected krill aggregations: A case study from Southern Ocean
Acoustic surveys represent the standard methodology to assess the spatial distribution and abundance of pelagic organisms characterized by aggregative behaviour. The species identification of acoustically observed aggregations is usually performed by taking into account the biological sampling and a...
Published in: | Environmental Modelling & Software |
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Main Authors: | , , , , , , , , , , , |
Format: | Article in Journal/Newspaper |
Language: | English |
Published: |
2022
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Subjects: | |
Online Access: | http://hdl.handle.net/10447/537375 https://doi.org/10.1016/j.envsoft.2022.105357 |
_version_ | 1835014154988027904 |
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author | Fontana, Ignazio Barra, Marco Bonanno, Angelo Giacalone, Giovanni Rizzo, Riccardo Mangoni, Olga Genovese, Simona Basilone, Gualtiero Ferreri, Rosalia Mazzola, Salvatore Lo Bosco, Giosué Aronica, Salvatore |
author2 | Fontana, Ignazio Barra, Marco Bonanno, Angelo Giacalone, Giovanni Rizzo, Riccardo Mangoni, Olga Genovese, Simona Basilone, Gualtiero Ferreri, Rosalia Mazzola, Salvatore Lo Bosco, Giosué Aronica, Salvatore |
author_facet | Fontana, Ignazio Barra, Marco Bonanno, Angelo Giacalone, Giovanni Rizzo, Riccardo Mangoni, Olga Genovese, Simona Basilone, Gualtiero Ferreri, Rosalia Mazzola, Salvatore Lo Bosco, Giosué Aronica, Salvatore |
author_sort | Fontana, Ignazio |
collection | Unknown |
container_start_page | 105357 |
container_title | Environmental Modelling & Software |
container_volume | 151 |
description | Acoustic surveys represent the standard methodology to assess the spatial distribution and abundance of pelagic organisms characterized by aggregative behaviour. The species identification of acoustically observed aggregations is usually performed by taking into account the biological sampling and according to expert-based knowledge. The precision of survey estimates, such as total abundance and spatial distribution, strongly depends on the efficiency of acoustic and biological sampling as well as on the species identification. In this context, the automatic identification of specific groups based on energetic and morphological features could improve the species identification process, allowing to improve the precision of survey estimates or to overcome problems related to biases in biological sampling. In the present study, we test the use of well-known unsupervised clustering methods focusing on two important krill species namely Euphausia superba and Euphausia crystallorophias. In order to obtain a reference classification, the observed echoes were first classified according to specific criteria based on two parameters accounting for the acoustic response at 38 kHz and 120kHz. Different clustering methods combined with three distance metrics were then tested working on a wider set of parameters, accounting for the depth of insonified aggregation as well as for energetic and morphological features. The clustering performances were then evaluated by comparing the reference classification to the one obtained by clustering. Obtained results showed that the k-means performs better than the considered hierarchical methods. Our findings also evidenced that working on a specific set of variables rather than on all available ones highly impact k-means performances. |
format | Article in Journal/Newspaper |
genre | Euphausia superba Ross Sea Southern Ocean |
genre_facet | Euphausia superba Ross Sea Southern Ocean |
geographic | Ross Sea Southern Ocean |
geographic_facet | Ross Sea Southern Ocean |
id | ftunivpalermo:oai:iris.unipa.it:10447/537375 |
institution | Open Polar |
language | English |
op_collection_id | ftunivpalermo |
op_doi | https://doi.org/10.1016/j.envsoft.2022.105357 |
op_relation | info:eu-repo/semantics/altIdentifier/wos/WOS:000787232600005 firstpage:1 lastpage:10 numberofpages:10 journal:ENVIRONMENTAL MODELLING & SOFTWARE http://hdl.handle.net/10447/537375 doi:10.1016/j.envsoft.2022.105357 |
op_rights | info:eu-repo/semantics/openAccess |
publishDate | 2022 |
record_format | openpolar |
spelling | ftunivpalermo:oai:iris.unipa.it:10447/537375 2025-06-15T14:26:31+00:00 Automatic classification of acoustically detected krill aggregations: A case study from Southern Ocean Fontana, Ignazio Barra, Marco Bonanno, Angelo Giacalone, Giovanni Rizzo, Riccardo Mangoni, Olga Genovese, Simona Basilone, Gualtiero Ferreri, Rosalia Mazzola, Salvatore Lo Bosco, Giosué Aronica, Salvatore Fontana, Ignazio Barra, Marco Bonanno, Angelo Giacalone, Giovanni Rizzo, Riccardo Mangoni, Olga Genovese, Simona Basilone, Gualtiero Ferreri, Rosalia Mazzola, Salvatore Lo Bosco, Giosué Aronica, Salvatore 2022-05 http://hdl.handle.net/10447/537375 https://doi.org/10.1016/j.envsoft.2022.105357 eng eng info:eu-repo/semantics/altIdentifier/wos/WOS:000787232600005 firstpage:1 lastpage:10 numberofpages:10 journal:ENVIRONMENTAL MODELLING & SOFTWARE http://hdl.handle.net/10447/537375 doi:10.1016/j.envsoft.2022.105357 info:eu-repo/semantics/openAccess Hierarchical clustering k-means Krill Ross Sea Internal validation indices Acoustic Settore INF/01 - Informatica Settore ING-INF/05 - Sistemi Di Elaborazione Delle Informazioni info:eu-repo/semantics/article 2022 ftunivpalermo https://doi.org/10.1016/j.envsoft.2022.105357 2025-05-26T04:52:23Z Acoustic surveys represent the standard methodology to assess the spatial distribution and abundance of pelagic organisms characterized by aggregative behaviour. The species identification of acoustically observed aggregations is usually performed by taking into account the biological sampling and according to expert-based knowledge. The precision of survey estimates, such as total abundance and spatial distribution, strongly depends on the efficiency of acoustic and biological sampling as well as on the species identification. In this context, the automatic identification of specific groups based on energetic and morphological features could improve the species identification process, allowing to improve the precision of survey estimates or to overcome problems related to biases in biological sampling. In the present study, we test the use of well-known unsupervised clustering methods focusing on two important krill species namely Euphausia superba and Euphausia crystallorophias. In order to obtain a reference classification, the observed echoes were first classified according to specific criteria based on two parameters accounting for the acoustic response at 38 kHz and 120kHz. Different clustering methods combined with three distance metrics were then tested working on a wider set of parameters, accounting for the depth of insonified aggregation as well as for energetic and morphological features. The clustering performances were then evaluated by comparing the reference classification to the one obtained by clustering. Obtained results showed that the k-means performs better than the considered hierarchical methods. Our findings also evidenced that working on a specific set of variables rather than on all available ones highly impact k-means performances. Article in Journal/Newspaper Euphausia superba Ross Sea Southern Ocean Unknown Ross Sea Southern Ocean Environmental Modelling & Software 151 105357 |
spellingShingle | Hierarchical clustering k-means Krill Ross Sea Internal validation indices Acoustic Settore INF/01 - Informatica Settore ING-INF/05 - Sistemi Di Elaborazione Delle Informazioni Fontana, Ignazio Barra, Marco Bonanno, Angelo Giacalone, Giovanni Rizzo, Riccardo Mangoni, Olga Genovese, Simona Basilone, Gualtiero Ferreri, Rosalia Mazzola, Salvatore Lo Bosco, Giosué Aronica, Salvatore Automatic classification of acoustically detected krill aggregations: A case study from Southern Ocean |
title | Automatic classification of acoustically detected krill aggregations: A case study from Southern Ocean |
title_full | Automatic classification of acoustically detected krill aggregations: A case study from Southern Ocean |
title_fullStr | Automatic classification of acoustically detected krill aggregations: A case study from Southern Ocean |
title_full_unstemmed | Automatic classification of acoustically detected krill aggregations: A case study from Southern Ocean |
title_short | Automatic classification of acoustically detected krill aggregations: A case study from Southern Ocean |
title_sort | automatic classification of acoustically detected krill aggregations: a case study from southern ocean |
topic | Hierarchical clustering k-means Krill Ross Sea Internal validation indices Acoustic Settore INF/01 - Informatica Settore ING-INF/05 - Sistemi Di Elaborazione Delle Informazioni |
topic_facet | Hierarchical clustering k-means Krill Ross Sea Internal validation indices Acoustic Settore INF/01 - Informatica Settore ING-INF/05 - Sistemi Di Elaborazione Delle Informazioni |
url | http://hdl.handle.net/10447/537375 https://doi.org/10.1016/j.envsoft.2022.105357 |