Chodatodesmus australis sp. nov. (Scenedesmaceae, Chlorophyta) from Antarctica, with the emended description of the genus Chodatodesmus, and circumscription of Flechtneria rotunda gen. et sp. nov

The family Scenedesmaceae is a taxonomically complicated group due to its simple morphology, high phenotypic plasticity, and the presence of cryptic taxa. Over the years several taxonomic revisions, based on molecular data, affected the family. Here, we describe a new scenedesmacean species from Ant...

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Published in:Journal of Phycology
Main Authors: SCIUTO, KATIA, Lewis, Louise A., Verleyen, Elie, MORO, ISABELLA, LA ROCCA, NICOLETTA
Other Authors: Sciuto, Katia, Moro, Isabella, LA ROCCA, Nicoletta
Format: Article in Journal/Newspaper
Language:English
Published: Wiley Online Library 2015
Subjects:
Online Access:http://hdl.handle.net/11577/3168055
https://doi.org/10.1111/jpy.12355
http://www.wiley.com/bw/editors.asp?ref=0022-3646&site=1
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record_format openpolar
spelling ftunivpadovairis:oai:www.research.unipd.it:11577/3168055 2024-04-21T07:49:01+00:00 Chodatodesmus australis sp. nov. (Scenedesmaceae, Chlorophyta) from Antarctica, with the emended description of the genus Chodatodesmus, and circumscription of Flechtneria rotunda gen. et sp. nov SCIUTO, KATIA Lewis, Louise A. Verleyen, Elie MORO, ISABELLA LA ROCCA, NICOLETTA Sciuto, Katia Lewis, Louise A. Verleyen, Elie Moro, Isabella LA ROCCA, Nicoletta 2015 ELETTRONICO http://hdl.handle.net/11577/3168055 https://doi.org/10.1111/jpy.12355 http://www.wiley.com/bw/editors.asp?ref=0022-3646&site=1 eng eng Wiley Online Library info:eu-repo/semantics/altIdentifier/wos/WOS:000368433300015 volume:51 issue:6 firstpage:1172 lastpage:1188 numberofpages:17 journal:JOURNAL OF PHYCOLOGY http://hdl.handle.net/11577/3168055 doi:10.1111/jpy.12355 info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-84955177095 http://www.wiley.com/bw/editors.asp?ref=0022-3646&site=1 18S rDNA Chodatodesmus australi Flechtneria rotunda ITS2 rbcL Scenedesmaceae tufA Aquatic Science Plant Science info:eu-repo/semantics/article 2015 ftunivpadovairis https://doi.org/10.1111/jpy.12355 2024-03-28T01:48:43Z The family Scenedesmaceae is a taxonomically complicated group due to its simple morphology, high phenotypic plasticity, and the presence of cryptic taxa. Over the years several taxonomic revisions, based on molecular data, affected the family. Here, we describe a new scenedesmacean species from Antarctica, Chodatodesmus australis, based on phylogenetic analyses of data from nuclear (ITS2 spacer, 18S rDNA), and plastid (rbcL, tufA) markers. Morphological (LM and SEM) and ultrastructural (TEM) observations, carried out both on the holotype of C. australis and on the generitype of Chodatodesmus, allow us to emend the original generic description of this genus. Our molecular and phylogenetic data also reveal the existence of a new monotypic genus, Flechtneria, inside the family Scenedesmaceae and lead to the taxonomic reassignment of some microalgal strains available in International Culture Collections to new taxa. Of the considered genomic regions, the tufA gene was the easiest to amplify and sequence and it showed the highest phylogenetic signal, even if the number of sequences already available for this marker in the public databases was considerably lower than for the other chosen loci. The rbcL gene also provided good phylogenetic signal, but its amplification and sequencing were generally more problematic. The nuclear markers gave lower phylogenetic signals, but the 18S rDNA allowed distinction at the genus level and the ITS2 spacer had the advantage that secondary structures could be considered in the analyses. The use of more than one molecular locus is suggested to obtain reliable results in the characterization of scenedesmacean strains. Article in Journal/Newspaper Antarc* Antarctica Padua Research Archive (IRIS - Università degli Studi di Padova) Journal of Phycology 51 6 1172 1188
institution Open Polar
collection Padua Research Archive (IRIS - Università degli Studi di Padova)
op_collection_id ftunivpadovairis
language English
topic 18S rDNA
Chodatodesmus australi
Flechtneria rotunda
ITS2
rbcL
Scenedesmaceae
tufA
Aquatic Science
Plant Science
spellingShingle 18S rDNA
Chodatodesmus australi
Flechtneria rotunda
ITS2
rbcL
Scenedesmaceae
tufA
Aquatic Science
Plant Science
SCIUTO, KATIA
Lewis, Louise A.
Verleyen, Elie
MORO, ISABELLA
LA ROCCA, NICOLETTA
Chodatodesmus australis sp. nov. (Scenedesmaceae, Chlorophyta) from Antarctica, with the emended description of the genus Chodatodesmus, and circumscription of Flechtneria rotunda gen. et sp. nov
topic_facet 18S rDNA
Chodatodesmus australi
Flechtneria rotunda
ITS2
rbcL
Scenedesmaceae
tufA
Aquatic Science
Plant Science
description The family Scenedesmaceae is a taxonomically complicated group due to its simple morphology, high phenotypic plasticity, and the presence of cryptic taxa. Over the years several taxonomic revisions, based on molecular data, affected the family. Here, we describe a new scenedesmacean species from Antarctica, Chodatodesmus australis, based on phylogenetic analyses of data from nuclear (ITS2 spacer, 18S rDNA), and plastid (rbcL, tufA) markers. Morphological (LM and SEM) and ultrastructural (TEM) observations, carried out both on the holotype of C. australis and on the generitype of Chodatodesmus, allow us to emend the original generic description of this genus. Our molecular and phylogenetic data also reveal the existence of a new monotypic genus, Flechtneria, inside the family Scenedesmaceae and lead to the taxonomic reassignment of some microalgal strains available in International Culture Collections to new taxa. Of the considered genomic regions, the tufA gene was the easiest to amplify and sequence and it showed the highest phylogenetic signal, even if the number of sequences already available for this marker in the public databases was considerably lower than for the other chosen loci. The rbcL gene also provided good phylogenetic signal, but its amplification and sequencing were generally more problematic. The nuclear markers gave lower phylogenetic signals, but the 18S rDNA allowed distinction at the genus level and the ITS2 spacer had the advantage that secondary structures could be considered in the analyses. The use of more than one molecular locus is suggested to obtain reliable results in the characterization of scenedesmacean strains.
author2 Sciuto, Katia
Lewis, Louise A.
Verleyen, Elie
Moro, Isabella
LA ROCCA, Nicoletta
format Article in Journal/Newspaper
author SCIUTO, KATIA
Lewis, Louise A.
Verleyen, Elie
MORO, ISABELLA
LA ROCCA, NICOLETTA
author_facet SCIUTO, KATIA
Lewis, Louise A.
Verleyen, Elie
MORO, ISABELLA
LA ROCCA, NICOLETTA
author_sort SCIUTO, KATIA
title Chodatodesmus australis sp. nov. (Scenedesmaceae, Chlorophyta) from Antarctica, with the emended description of the genus Chodatodesmus, and circumscription of Flechtneria rotunda gen. et sp. nov
title_short Chodatodesmus australis sp. nov. (Scenedesmaceae, Chlorophyta) from Antarctica, with the emended description of the genus Chodatodesmus, and circumscription of Flechtneria rotunda gen. et sp. nov
title_full Chodatodesmus australis sp. nov. (Scenedesmaceae, Chlorophyta) from Antarctica, with the emended description of the genus Chodatodesmus, and circumscription of Flechtneria rotunda gen. et sp. nov
title_fullStr Chodatodesmus australis sp. nov. (Scenedesmaceae, Chlorophyta) from Antarctica, with the emended description of the genus Chodatodesmus, and circumscription of Flechtneria rotunda gen. et sp. nov
title_full_unstemmed Chodatodesmus australis sp. nov. (Scenedesmaceae, Chlorophyta) from Antarctica, with the emended description of the genus Chodatodesmus, and circumscription of Flechtneria rotunda gen. et sp. nov
title_sort chodatodesmus australis sp. nov. (scenedesmaceae, chlorophyta) from antarctica, with the emended description of the genus chodatodesmus, and circumscription of flechtneria rotunda gen. et sp. nov
publisher Wiley Online Library
publishDate 2015
url http://hdl.handle.net/11577/3168055
https://doi.org/10.1111/jpy.12355
http://www.wiley.com/bw/editors.asp?ref=0022-3646&site=1
genre Antarc*
Antarctica
genre_facet Antarc*
Antarctica
op_relation info:eu-repo/semantics/altIdentifier/wos/WOS:000368433300015
volume:51
issue:6
firstpage:1172
lastpage:1188
numberofpages:17
journal:JOURNAL OF PHYCOLOGY
http://hdl.handle.net/11577/3168055
doi:10.1111/jpy.12355
info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-84955177095
http://www.wiley.com/bw/editors.asp?ref=0022-3646&site=1
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container_title Journal of Phycology
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container_issue 6
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