Spatial pattern in Antarctica: what can we learn from Antarctic bacterial isolates?

A range of small- to moderate-scale studies of patterns in bacterial biodiversity have been conducted in Antarctica over the last two decades, most suggesting strong correlations between the described bacterial communities and elements of local environmental heterogeneity. However, very few of these...

Full description

Bibliographic Details
Published in:Extremophiles
Main Authors: Chong, Chun Wie, Goh, Yuh Shan, Convey, Peter, Pearce, David, Tan, Irene
Format: Article in Journal/Newspaper
Language:unknown
Published: Springer 2013
Subjects:
Online Access:https://nrl.northumbria.ac.uk/id/eprint/16957/
https://doi.org/10.1007/s00792-013-0555-3
id ftunivnorthumb:oai:nrl.northumbria.ac.uk:16957
record_format openpolar
spelling ftunivnorthumb:oai:nrl.northumbria.ac.uk:16957 2023-05-15T13:35:33+02:00 Spatial pattern in Antarctica: what can we learn from Antarctic bacterial isolates? Chong, Chun Wie Goh, Yuh Shan Convey, Peter Pearce, David Tan, Irene 2013-09 https://nrl.northumbria.ac.uk/id/eprint/16957/ https://doi.org/10.1007/s00792-013-0555-3 unknown Springer Chong, Chun Wie, Goh, Yuh Shan, Convey, Peter, Pearce, David and Tan, Irene (2013) Spatial pattern in Antarctica: what can we learn from Antarctic bacterial isolates? Extremophiles, 17 (5). pp. 733-745. ISSN 1431-0651 C500 Microbiology F800 Physical and Terrestrial Geographical and Environmental Sciences Article PeerReviewed 2013 ftunivnorthumb https://doi.org/10.1007/s00792-013-0555-3 2022-09-25T05:59:39Z A range of small- to moderate-scale studies of patterns in bacterial biodiversity have been conducted in Antarctica over the last two decades, most suggesting strong correlations between the described bacterial communities and elements of local environmental heterogeneity. However, very few of these studies have advanced interpretations in terms of spatially associated patterns, despite increasing evidence of patterns in bacterial biogeography globally. This is likely to be a consequence of restricted sampling coverage, with most studies to date focusing only on a few localities within a specific Antarctic region. Clearly, there is now a need for synthesis over a much larger spatial to consolidate the available data. In this study, we collated Antarctic bacterial culture identities based on the 16S rRNA gene information available in the literature and the GenBank database (n > 2,000 sequences). In contrast to some recent evidence for a distinct Antarctic microbiome, our phylogenetic comparisons show that a majority (~75 %) of Antarctic bacterial isolates were highly similar (≥99 % sequence similarity) to those retrieved from tropical and temperate regions, suggesting widespread distribution of eurythermal mesophiles in Antarctic environments. However, across different Antarctic regions, the dominant bacterial genera exhibit some spatially distinct diversity patterns analogous to those recently proposed for Antarctic terrestrial macroorganisms. Taken together, our results highlight the threat of cross-regional homogenisation in Antarctic biodiversity, and the imperative to include microbiota within the framework of biosecurity measures for Antarctica. Article in Journal/Newspaper Antarc* Antarctic Antarctica Northumbria University, Newcastle: Northumbria Research Link (NRL) Antarctic Extremophiles 17 5 733 745
institution Open Polar
collection Northumbria University, Newcastle: Northumbria Research Link (NRL)
op_collection_id ftunivnorthumb
language unknown
topic C500 Microbiology
F800 Physical and Terrestrial Geographical and Environmental Sciences
spellingShingle C500 Microbiology
F800 Physical and Terrestrial Geographical and Environmental Sciences
Chong, Chun Wie
Goh, Yuh Shan
Convey, Peter
Pearce, David
Tan, Irene
Spatial pattern in Antarctica: what can we learn from Antarctic bacterial isolates?
topic_facet C500 Microbiology
F800 Physical and Terrestrial Geographical and Environmental Sciences
description A range of small- to moderate-scale studies of patterns in bacterial biodiversity have been conducted in Antarctica over the last two decades, most suggesting strong correlations between the described bacterial communities and elements of local environmental heterogeneity. However, very few of these studies have advanced interpretations in terms of spatially associated patterns, despite increasing evidence of patterns in bacterial biogeography globally. This is likely to be a consequence of restricted sampling coverage, with most studies to date focusing only on a few localities within a specific Antarctic region. Clearly, there is now a need for synthesis over a much larger spatial to consolidate the available data. In this study, we collated Antarctic bacterial culture identities based on the 16S rRNA gene information available in the literature and the GenBank database (n > 2,000 sequences). In contrast to some recent evidence for a distinct Antarctic microbiome, our phylogenetic comparisons show that a majority (~75 %) of Antarctic bacterial isolates were highly similar (≥99 % sequence similarity) to those retrieved from tropical and temperate regions, suggesting widespread distribution of eurythermal mesophiles in Antarctic environments. However, across different Antarctic regions, the dominant bacterial genera exhibit some spatially distinct diversity patterns analogous to those recently proposed for Antarctic terrestrial macroorganisms. Taken together, our results highlight the threat of cross-regional homogenisation in Antarctic biodiversity, and the imperative to include microbiota within the framework of biosecurity measures for Antarctica.
format Article in Journal/Newspaper
author Chong, Chun Wie
Goh, Yuh Shan
Convey, Peter
Pearce, David
Tan, Irene
author_facet Chong, Chun Wie
Goh, Yuh Shan
Convey, Peter
Pearce, David
Tan, Irene
author_sort Chong, Chun Wie
title Spatial pattern in Antarctica: what can we learn from Antarctic bacterial isolates?
title_short Spatial pattern in Antarctica: what can we learn from Antarctic bacterial isolates?
title_full Spatial pattern in Antarctica: what can we learn from Antarctic bacterial isolates?
title_fullStr Spatial pattern in Antarctica: what can we learn from Antarctic bacterial isolates?
title_full_unstemmed Spatial pattern in Antarctica: what can we learn from Antarctic bacterial isolates?
title_sort spatial pattern in antarctica: what can we learn from antarctic bacterial isolates?
publisher Springer
publishDate 2013
url https://nrl.northumbria.ac.uk/id/eprint/16957/
https://doi.org/10.1007/s00792-013-0555-3
geographic Antarctic
geographic_facet Antarctic
genre Antarc*
Antarctic
Antarctica
genre_facet Antarc*
Antarctic
Antarctica
op_relation Chong, Chun Wie, Goh, Yuh Shan, Convey, Peter, Pearce, David and Tan, Irene (2013) Spatial pattern in Antarctica: what can we learn from Antarctic bacterial isolates? Extremophiles, 17 (5). pp. 733-745. ISSN 1431-0651
op_doi https://doi.org/10.1007/s00792-013-0555-3
container_title Extremophiles
container_volume 17
container_issue 5
container_start_page 733
op_container_end_page 745
_version_ 1766067068099100672