Detection of a novel ecotype of Pfiesteria piscicida (Dinophyceae) in an Antarctic saline lake by real-time PCR

The heterotrophic dinoflagellate Pfiesteria piscicida was detected in Ace Lake in the Vestfold Hills, eastern Antarctica by using real-time PCR based on 18S rDNA sequences. Antarctic water samples collected in 2004 were tested by species-specific real-time PCR assays for the identification of P. pis...

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Main Authors: NC DOCKS at The University of North Carolina at Greensboro, Rublee, Parke A.
Language:English
Published: 2007
Subjects:
Online Access:http://libres.uncg.edu/ir/uncg/f/P_Rublee_Detection_2007.pdf
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spelling ftunivnorthcag:oai:libres.uncg.edu/7577 2024-02-11T09:58:36+01:00 Detection of a novel ecotype of Pfiesteria piscicida (Dinophyceae) in an Antarctic saline lake by real-time PCR NC DOCKS at The University of North Carolina at Greensboro Rublee, Parke A. 2007 http://libres.uncg.edu/ir/uncg/f/P_Rublee_Detection_2007.pdf English eng http://libres.uncg.edu/ir/uncg/f/P_Rublee_Detection_2007.pdf 2007 ftunivnorthcag 2024-01-27T23:44:46Z The heterotrophic dinoflagellate Pfiesteria piscicida was detected in Ace Lake in the Vestfold Hills, eastern Antarctica by using real-time PCR based on 18S rDNA sequences. Antarctic water samples collected in 2004 were tested by species-specific real-time PCR assays for the identification of P. piscicida and P. shumwayae. Positive results were shown with P. piscicida-specific real-time PCR, and PCR products were examined by sequence analysis for confirmation. A phylogenetic tree made from partial 18S rDNA sequences showed that the Antarctic clone clustered with P. piscicida. This result suggests that P. piscicida is present in the extreme conditions of an Antarctic saline lake which has not contained fish for thousands of years. Other/Unknown Material Antarc* Antarctic Antarctica University of North Carolina: NC DOCKS (Digital Online Collection of Knowledge and Scholarship) Antarctic The Antarctic Vestfold Hills Vestfold Ace Lake ENVELOPE(78.188,78.188,-68.472,-68.472) Saline Lake ENVELOPE(-111.528,-111.528,57.081,57.081)
institution Open Polar
collection University of North Carolina: NC DOCKS (Digital Online Collection of Knowledge and Scholarship)
op_collection_id ftunivnorthcag
language English
description The heterotrophic dinoflagellate Pfiesteria piscicida was detected in Ace Lake in the Vestfold Hills, eastern Antarctica by using real-time PCR based on 18S rDNA sequences. Antarctic water samples collected in 2004 were tested by species-specific real-time PCR assays for the identification of P. piscicida and P. shumwayae. Positive results were shown with P. piscicida-specific real-time PCR, and PCR products were examined by sequence analysis for confirmation. A phylogenetic tree made from partial 18S rDNA sequences showed that the Antarctic clone clustered with P. piscicida. This result suggests that P. piscicida is present in the extreme conditions of an Antarctic saline lake which has not contained fish for thousands of years.
author NC DOCKS at The University of North Carolina at Greensboro
Rublee, Parke A.
spellingShingle NC DOCKS at The University of North Carolina at Greensboro
Rublee, Parke A.
Detection of a novel ecotype of Pfiesteria piscicida (Dinophyceae) in an Antarctic saline lake by real-time PCR
author_facet NC DOCKS at The University of North Carolina at Greensboro
Rublee, Parke A.
author_sort NC DOCKS at The University of North Carolina at Greensboro
title Detection of a novel ecotype of Pfiesteria piscicida (Dinophyceae) in an Antarctic saline lake by real-time PCR
title_short Detection of a novel ecotype of Pfiesteria piscicida (Dinophyceae) in an Antarctic saline lake by real-time PCR
title_full Detection of a novel ecotype of Pfiesteria piscicida (Dinophyceae) in an Antarctic saline lake by real-time PCR
title_fullStr Detection of a novel ecotype of Pfiesteria piscicida (Dinophyceae) in an Antarctic saline lake by real-time PCR
title_full_unstemmed Detection of a novel ecotype of Pfiesteria piscicida (Dinophyceae) in an Antarctic saline lake by real-time PCR
title_sort detection of a novel ecotype of pfiesteria piscicida (dinophyceae) in an antarctic saline lake by real-time pcr
publishDate 2007
url http://libres.uncg.edu/ir/uncg/f/P_Rublee_Detection_2007.pdf
long_lat ENVELOPE(78.188,78.188,-68.472,-68.472)
ENVELOPE(-111.528,-111.528,57.081,57.081)
geographic Antarctic
The Antarctic
Vestfold Hills
Vestfold
Ace Lake
Saline Lake
geographic_facet Antarctic
The Antarctic
Vestfold Hills
Vestfold
Ace Lake
Saline Lake
genre Antarc*
Antarctic
Antarctica
genre_facet Antarc*
Antarctic
Antarctica
op_relation http://libres.uncg.edu/ir/uncg/f/P_Rublee_Detection_2007.pdf
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