Genomic identification of the long-chain alkenone producer in freshwater Lake Toyoni, Japan: implications for temperature reconstructions

Identifying the lacustrine haptophyte species that produce long-chain alkenones (LCAs) is essential prior to down-core temperature reconstructions. Here, we investigated the identity of LCA-producing species from Lake Toyoni, Japan using 18S ribosomal DNA (rDNA) and organic geochemical analyses. The...

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Main Authors: Plancq J, McColl JL, Bendle JA, Seki O, Couto JM, Henderson ACG, Yamashita Y, Kimitaka K, Toney JL
Format: Article in Journal/Newspaper
Language:unknown
Published: Pergamon Press
Subjects:
Online Access:https://eprint.ncl.ac.uk/fulltext.aspx?url=251216/F6424F6B-148D-43F0-8E36-95525C71A2DF.pdf&pub_id=251216
id ftunivnewcastle:oai:eprint.ncl.ac.uk:251216
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spelling ftunivnewcastle:oai:eprint.ncl.ac.uk:251216 2023-05-15T16:26:13+02:00 Genomic identification of the long-chain alkenone producer in freshwater Lake Toyoni, Japan: implications for temperature reconstructions Plancq J McColl JL Bendle JA Seki O Couto JM Henderson ACG Yamashita Y Kimitaka K Toney JL application/pdf https://eprint.ncl.ac.uk/fulltext.aspx?url=251216/F6424F6B-148D-43F0-8E36-95525C71A2DF.pdf&pub_id=251216 unknown Pergamon Press Organic Geochemistry Article ftunivnewcastle 2020-06-11T23:43:41Z Identifying the lacustrine haptophyte species that produce long-chain alkenones (LCAs) is essential prior to down-core temperature reconstructions. Here, we investigated the identity of LCA-producing species from Lake Toyoni, Japan using 18S ribosomal DNA (rDNA) and organic geochemical analyses. The rDNA analyses identified eighteen operational taxonomic units (OTUs) of which only one fell within the haptophyte phylotype. This haptophyte belongs to the Group I phylotype, as supported by the LCA distribution found in surface and down-core sediments, and is closely related to a haptophyte found in Lake BrayaSø (Greenland). The inferred temperature using the Greenland calibration is very close to the Lake Toyoni surface temperature recorded during the spring/early summer season, when the LCA-producing haptophyte is likely to bloom. We therefore suggest that the temperature calibration from the Lake BrayaSø, Greenland is a suitable calibration for down-core temperature reconstructions at Lake Toyoni. Article in Journal/Newspaper Greenland Newcastle University Library ePrints Service Greenland
institution Open Polar
collection Newcastle University Library ePrints Service
op_collection_id ftunivnewcastle
language unknown
description Identifying the lacustrine haptophyte species that produce long-chain alkenones (LCAs) is essential prior to down-core temperature reconstructions. Here, we investigated the identity of LCA-producing species from Lake Toyoni, Japan using 18S ribosomal DNA (rDNA) and organic geochemical analyses. The rDNA analyses identified eighteen operational taxonomic units (OTUs) of which only one fell within the haptophyte phylotype. This haptophyte belongs to the Group I phylotype, as supported by the LCA distribution found in surface and down-core sediments, and is closely related to a haptophyte found in Lake BrayaSø (Greenland). The inferred temperature using the Greenland calibration is very close to the Lake Toyoni surface temperature recorded during the spring/early summer season, when the LCA-producing haptophyte is likely to bloom. We therefore suggest that the temperature calibration from the Lake BrayaSø, Greenland is a suitable calibration for down-core temperature reconstructions at Lake Toyoni.
format Article in Journal/Newspaper
author Plancq J
McColl JL
Bendle JA
Seki O
Couto JM
Henderson ACG
Yamashita Y
Kimitaka K
Toney JL
spellingShingle Plancq J
McColl JL
Bendle JA
Seki O
Couto JM
Henderson ACG
Yamashita Y
Kimitaka K
Toney JL
Genomic identification of the long-chain alkenone producer in freshwater Lake Toyoni, Japan: implications for temperature reconstructions
author_facet Plancq J
McColl JL
Bendle JA
Seki O
Couto JM
Henderson ACG
Yamashita Y
Kimitaka K
Toney JL
author_sort Plancq J
title Genomic identification of the long-chain alkenone producer in freshwater Lake Toyoni, Japan: implications for temperature reconstructions
title_short Genomic identification of the long-chain alkenone producer in freshwater Lake Toyoni, Japan: implications for temperature reconstructions
title_full Genomic identification of the long-chain alkenone producer in freshwater Lake Toyoni, Japan: implications for temperature reconstructions
title_fullStr Genomic identification of the long-chain alkenone producer in freshwater Lake Toyoni, Japan: implications for temperature reconstructions
title_full_unstemmed Genomic identification of the long-chain alkenone producer in freshwater Lake Toyoni, Japan: implications for temperature reconstructions
title_sort genomic identification of the long-chain alkenone producer in freshwater lake toyoni, japan: implications for temperature reconstructions
publisher Pergamon Press
url https://eprint.ncl.ac.uk/fulltext.aspx?url=251216/F6424F6B-148D-43F0-8E36-95525C71A2DF.pdf&pub_id=251216
geographic Greenland
geographic_facet Greenland
genre Greenland
genre_facet Greenland
op_source Organic Geochemistry
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