Population histories of right whales (Cetacea: Eubalaena ) Inferred from Mitochondrial Sequence Diversities and Divergences of Their Whale Lice (Amphipoda: Cyamus )
Right whales carry large populations of three ‘whale lice’ (Cyamus ovalis, Cyamus gracilis, Cyamus erraticus) that have no other hosts. We used sequence variation in the mitochondrial COI gene to ask (i) whether cyamid population structures might reveal associations among right whale individuals and...
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ftunivnebraskali:oai:digitalcommons.unl.edu:usdeptcommercepub-1092 2023-11-12T04:16:47+01:00 Population histories of right whales (Cetacea: Eubalaena ) Inferred from Mitochondrial Sequence Diversities and Divergences of Their Whale Lice (Amphipoda: Cyamus ) Kaliszewska, Zofia A. Seger, Jon Rowntree, Victoria J. Knowlton, Amy R. Marshalltilas, Kim Patenaude, Nathalie J. Rivarola, Mariana Schaeff, Catherine M. Sironi, Mariano Smith, Wendy A. Yamada, Tadasu K. Barco, Susan G. Benegas, Rafael Best, Peter B. Brown, Moira W. Brownell, Robert L., Jr. Harcourt, Robert Carribero, Alejandro 2005-01-01T08:00:00Z application/pdf https://digitalcommons.unl.edu/usdeptcommercepub/88 https://digitalcommons.unl.edu/context/usdeptcommercepub/article/1092/viewcontent/Brownell_ME_2005_Population_histories_right_whales.pdf unknown DigitalCommons@University of Nebraska - Lincoln https://digitalcommons.unl.edu/usdeptcommercepub/88 https://digitalcommons.unl.edu/context/usdeptcommercepub/article/1092/viewcontent/Brownell_ME_2005_Population_histories_right_whales.pdf Publications, Agencies and Staff of the U.S. Department of Commerce Environmental Sciences text 2005 ftunivnebraskali 2023-10-30T09:43:02Z Right whales carry large populations of three ‘whale lice’ (Cyamus ovalis, Cyamus gracilis, Cyamus erraticus) that have no other hosts. We used sequence variation in the mitochondrial COI gene to ask (i) whether cyamid population structures might reveal associations among right whale individuals and subpopulations, (ii) whether the divergences of the three nominally conspecific cyamid species on North Atlantic, North Pacific, and southern right whales (Eubalaena glacialis, Eubalaena japonica, Eubalaena australis) might indicate their times of separation, and (iii) whether the shapes of cyamid gene trees might contain information about changes in the population sizes of right whales. We found high levels of nucleotide diversity but almost no population structure within oceans, indicating large effective population sizes and high rates of transfer between whales and subpopulations. North Atlantic and Southern Ocean populations of all three species are reciprocally monophyletic, and North Pacific C. erraticus is well separated from North Atlantic and southern C. erraticus. Mitochondrial clock calibrations suggest that these divergences occurred around 6 million years ago (Ma), and that the Eubalaena mitochondrial clock is very slow. North Pacific C. ovalis forms a clade inside the southern C. ovalis gene tree, implying that at least one right whale has crossed the equator in the Pacific Ocean within the last 1–2 million years (Myr). Low-frequency polymorphisms are more common than expected under neutrality for populations of constant size, but there is no obvious signal of rapid, interspecifically congruent expansion of the kind that would be expected if North Atlantic or southern right whales had experienced a prolonged population bottleneck within the last 0.5 Myr. Text Eubalaena glacialis Eubalaena japonica North Atlantic Southern Ocean University of Nebraska-Lincoln: DigitalCommons@UNL Pacific Southern Ocean |
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University of Nebraska-Lincoln: DigitalCommons@UNL |
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ftunivnebraskali |
language |
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topic |
Environmental Sciences |
spellingShingle |
Environmental Sciences Kaliszewska, Zofia A. Seger, Jon Rowntree, Victoria J. Knowlton, Amy R. Marshalltilas, Kim Patenaude, Nathalie J. Rivarola, Mariana Schaeff, Catherine M. Sironi, Mariano Smith, Wendy A. Yamada, Tadasu K. Barco, Susan G. Benegas, Rafael Best, Peter B. Brown, Moira W. Brownell, Robert L., Jr. Harcourt, Robert Carribero, Alejandro Population histories of right whales (Cetacea: Eubalaena ) Inferred from Mitochondrial Sequence Diversities and Divergences of Their Whale Lice (Amphipoda: Cyamus ) |
topic_facet |
Environmental Sciences |
description |
Right whales carry large populations of three ‘whale lice’ (Cyamus ovalis, Cyamus gracilis, Cyamus erraticus) that have no other hosts. We used sequence variation in the mitochondrial COI gene to ask (i) whether cyamid population structures might reveal associations among right whale individuals and subpopulations, (ii) whether the divergences of the three nominally conspecific cyamid species on North Atlantic, North Pacific, and southern right whales (Eubalaena glacialis, Eubalaena japonica, Eubalaena australis) might indicate their times of separation, and (iii) whether the shapes of cyamid gene trees might contain information about changes in the population sizes of right whales. We found high levels of nucleotide diversity but almost no population structure within oceans, indicating large effective population sizes and high rates of transfer between whales and subpopulations. North Atlantic and Southern Ocean populations of all three species are reciprocally monophyletic, and North Pacific C. erraticus is well separated from North Atlantic and southern C. erraticus. Mitochondrial clock calibrations suggest that these divergences occurred around 6 million years ago (Ma), and that the Eubalaena mitochondrial clock is very slow. North Pacific C. ovalis forms a clade inside the southern C. ovalis gene tree, implying that at least one right whale has crossed the equator in the Pacific Ocean within the last 1–2 million years (Myr). Low-frequency polymorphisms are more common than expected under neutrality for populations of constant size, but there is no obvious signal of rapid, interspecifically congruent expansion of the kind that would be expected if North Atlantic or southern right whales had experienced a prolonged population bottleneck within the last 0.5 Myr. |
format |
Text |
author |
Kaliszewska, Zofia A. Seger, Jon Rowntree, Victoria J. Knowlton, Amy R. Marshalltilas, Kim Patenaude, Nathalie J. Rivarola, Mariana Schaeff, Catherine M. Sironi, Mariano Smith, Wendy A. Yamada, Tadasu K. Barco, Susan G. Benegas, Rafael Best, Peter B. Brown, Moira W. Brownell, Robert L., Jr. Harcourt, Robert Carribero, Alejandro |
author_facet |
Kaliszewska, Zofia A. Seger, Jon Rowntree, Victoria J. Knowlton, Amy R. Marshalltilas, Kim Patenaude, Nathalie J. Rivarola, Mariana Schaeff, Catherine M. Sironi, Mariano Smith, Wendy A. Yamada, Tadasu K. Barco, Susan G. Benegas, Rafael Best, Peter B. Brown, Moira W. Brownell, Robert L., Jr. Harcourt, Robert Carribero, Alejandro |
author_sort |
Kaliszewska, Zofia A. |
title |
Population histories of right whales (Cetacea: Eubalaena ) Inferred from Mitochondrial Sequence Diversities and Divergences of Their Whale Lice (Amphipoda: Cyamus ) |
title_short |
Population histories of right whales (Cetacea: Eubalaena ) Inferred from Mitochondrial Sequence Diversities and Divergences of Their Whale Lice (Amphipoda: Cyamus ) |
title_full |
Population histories of right whales (Cetacea: Eubalaena ) Inferred from Mitochondrial Sequence Diversities and Divergences of Their Whale Lice (Amphipoda: Cyamus ) |
title_fullStr |
Population histories of right whales (Cetacea: Eubalaena ) Inferred from Mitochondrial Sequence Diversities and Divergences of Their Whale Lice (Amphipoda: Cyamus ) |
title_full_unstemmed |
Population histories of right whales (Cetacea: Eubalaena ) Inferred from Mitochondrial Sequence Diversities and Divergences of Their Whale Lice (Amphipoda: Cyamus ) |
title_sort |
population histories of right whales (cetacea: eubalaena ) inferred from mitochondrial sequence diversities and divergences of their whale lice (amphipoda: cyamus ) |
publisher |
DigitalCommons@University of Nebraska - Lincoln |
publishDate |
2005 |
url |
https://digitalcommons.unl.edu/usdeptcommercepub/88 https://digitalcommons.unl.edu/context/usdeptcommercepub/article/1092/viewcontent/Brownell_ME_2005_Population_histories_right_whales.pdf |
geographic |
Pacific Southern Ocean |
geographic_facet |
Pacific Southern Ocean |
genre |
Eubalaena glacialis Eubalaena japonica North Atlantic Southern Ocean |
genre_facet |
Eubalaena glacialis Eubalaena japonica North Atlantic Southern Ocean |
op_source |
Publications, Agencies and Staff of the U.S. Department of Commerce |
op_relation |
https://digitalcommons.unl.edu/usdeptcommercepub/88 https://digitalcommons.unl.edu/context/usdeptcommercepub/article/1092/viewcontent/Brownell_ME_2005_Population_histories_right_whales.pdf |
_version_ |
1782333855571640320 |