Molecular response of Sargassum vulgare to acidification at volcanic CO2 vents: Insights from proteomic and metabolite analyses

Ocean acidification is impacting marine life all over the world. Understanding how species can cope with the changes in seawater carbonate chemistry represents a challenging issue. We addressed this topic using underwater CO2 vents that naturally acidify some marine areas off the island of Ischia. I...

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Published in:Molecular Ecology
Main Authors: Kumar, Amit, Nonnis, Simona, Castellano, Immacolata, AbdElgawad, Hamada, Beemster, Gerrit T S, Buia, Maria Cristina, Maffioli, Elisa, Tedeschi, Gabriella, Palumbo, Anna
Other Authors: Abdelgawad, Hamada
Format: Article in Journal/Newspaper
Language:English
Published: 2022
Subjects:
Online Access:https://hdl.handle.net/11588/899488
https://doi.org/10.1111/mec.16553
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spelling ftunivnapoliiris:oai:www.iris.unina.it:11588/899488 2024-04-14T08:17:39+00:00 Molecular response of Sargassum vulgare to acidification at volcanic CO2 vents: Insights from proteomic and metabolite analyses Kumar, Amit Nonnis, Simona Castellano, Immacolata AbdElgawad, Hamada Beemster, Gerrit T S Buia, Maria Cristina Maffioli, Elisa Tedeschi, Gabriella Palumbo, Anna Kumar, Amit Nonnis, Simona Castellano, Immacolata Abdelgawad, Hamada Beemster, Gerrit T S Buia, Maria Cristina Maffioli, Elisa Tedeschi, Gabriella Palumbo, Anna 2022 https://hdl.handle.net/11588/899488 https://doi.org/10.1111/mec.16553 eng eng info:eu-repo/semantics/altIdentifier/wos/WOS:000812867100001 volume:31 issue:14 firstpage:3844 lastpage:3858 numberofpages:15 journal:MOLECULAR ECOLOGY https://hdl.handle.net/11588/899488 doi:10.1111/mec.16553 info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-85132327033 CO2 seep adaptation macroalgae metabolite ocean acidification protein Carbon Dioxide Hydrogen-Ion Concentration Proteomic Seawater Sargassum info:eu-repo/semantics/article 2022 ftunivnapoliiris https://doi.org/10.1111/mec.16553 2024-03-21T18:46:55Z Ocean acidification is impacting marine life all over the world. Understanding how species can cope with the changes in seawater carbonate chemistry represents a challenging issue. We addressed this topic using underwater CO2 vents that naturally acidify some marine areas off the island of Ischia. In the most acidified area of the vents, having a mean pH value of 6.7, comparable to far-future predicted acidification scenarios (by 2300), the biomass is dominated by the brown alga Sargassum vulgare. The novelty of the present study is the characterization of the S. vulgare proteome together with metabolite analyses to identify the key proteins, metabolites, and pathways affected by ocean acidification. A total of 367 and 387 proteins were identified in populations grown at pH that approximates the current global average (8.1) and acidified sites, respectively. Analysis of their relative abundance revealed that 304 proteins are present in samples from both sites: 111 proteins are either higher or exclusively present under acidified conditions, whereas 120 proteins are either lower or present only under control conditions. Functionally, under acidification, a decrease in proteins related to translation and post-translational processes and an increase of proteins involved in photosynthesis, glycolysis, oxidation-reduction processes, and protein folding were observed. In addition, small-molecule metabolism was affected, leading to a decrease of some fatty acids and antioxidant compounds under acidification. Overall, the results obtained by proteins and metabolites analyses, integrated with previous transcriptomic, physiological, and biochemical studies, allowed us to delineate the molecular strategies adopted by S. vulgare to grow in future acidified environments, including an increase of proteins involved in energetic metabolism, oxidation-reduction processes, and protein folding at the expense of proteins involved in translation and post-translational processes. Article in Journal/Newspaper Ocean acidification IRIS Università degli Studi di Napoli Federico II Molecular Ecology 31 14 3844 3858
institution Open Polar
collection IRIS Università degli Studi di Napoli Federico II
op_collection_id ftunivnapoliiris
language English
topic CO2 seep
adaptation
macroalgae
metabolite
ocean acidification
protein
Carbon Dioxide
Hydrogen-Ion Concentration
Proteomic
Seawater
Sargassum
spellingShingle CO2 seep
adaptation
macroalgae
metabolite
ocean acidification
protein
Carbon Dioxide
Hydrogen-Ion Concentration
Proteomic
Seawater
Sargassum
Kumar, Amit
Nonnis, Simona
Castellano, Immacolata
AbdElgawad, Hamada
Beemster, Gerrit T S
Buia, Maria Cristina
Maffioli, Elisa
Tedeschi, Gabriella
Palumbo, Anna
Molecular response of Sargassum vulgare to acidification at volcanic CO2 vents: Insights from proteomic and metabolite analyses
topic_facet CO2 seep
adaptation
macroalgae
metabolite
ocean acidification
protein
Carbon Dioxide
Hydrogen-Ion Concentration
Proteomic
Seawater
Sargassum
description Ocean acidification is impacting marine life all over the world. Understanding how species can cope with the changes in seawater carbonate chemistry represents a challenging issue. We addressed this topic using underwater CO2 vents that naturally acidify some marine areas off the island of Ischia. In the most acidified area of the vents, having a mean pH value of 6.7, comparable to far-future predicted acidification scenarios (by 2300), the biomass is dominated by the brown alga Sargassum vulgare. The novelty of the present study is the characterization of the S. vulgare proteome together with metabolite analyses to identify the key proteins, metabolites, and pathways affected by ocean acidification. A total of 367 and 387 proteins were identified in populations grown at pH that approximates the current global average (8.1) and acidified sites, respectively. Analysis of their relative abundance revealed that 304 proteins are present in samples from both sites: 111 proteins are either higher or exclusively present under acidified conditions, whereas 120 proteins are either lower or present only under control conditions. Functionally, under acidification, a decrease in proteins related to translation and post-translational processes and an increase of proteins involved in photosynthesis, glycolysis, oxidation-reduction processes, and protein folding were observed. In addition, small-molecule metabolism was affected, leading to a decrease of some fatty acids and antioxidant compounds under acidification. Overall, the results obtained by proteins and metabolites analyses, integrated with previous transcriptomic, physiological, and biochemical studies, allowed us to delineate the molecular strategies adopted by S. vulgare to grow in future acidified environments, including an increase of proteins involved in energetic metabolism, oxidation-reduction processes, and protein folding at the expense of proteins involved in translation and post-translational processes.
author2 Kumar, Amit
Nonnis, Simona
Castellano, Immacolata
Abdelgawad, Hamada
Beemster, Gerrit T S
Buia, Maria Cristina
Maffioli, Elisa
Tedeschi, Gabriella
Palumbo, Anna
format Article in Journal/Newspaper
author Kumar, Amit
Nonnis, Simona
Castellano, Immacolata
AbdElgawad, Hamada
Beemster, Gerrit T S
Buia, Maria Cristina
Maffioli, Elisa
Tedeschi, Gabriella
Palumbo, Anna
author_facet Kumar, Amit
Nonnis, Simona
Castellano, Immacolata
AbdElgawad, Hamada
Beemster, Gerrit T S
Buia, Maria Cristina
Maffioli, Elisa
Tedeschi, Gabriella
Palumbo, Anna
author_sort Kumar, Amit
title Molecular response of Sargassum vulgare to acidification at volcanic CO2 vents: Insights from proteomic and metabolite analyses
title_short Molecular response of Sargassum vulgare to acidification at volcanic CO2 vents: Insights from proteomic and metabolite analyses
title_full Molecular response of Sargassum vulgare to acidification at volcanic CO2 vents: Insights from proteomic and metabolite analyses
title_fullStr Molecular response of Sargassum vulgare to acidification at volcanic CO2 vents: Insights from proteomic and metabolite analyses
title_full_unstemmed Molecular response of Sargassum vulgare to acidification at volcanic CO2 vents: Insights from proteomic and metabolite analyses
title_sort molecular response of sargassum vulgare to acidification at volcanic co2 vents: insights from proteomic and metabolite analyses
publishDate 2022
url https://hdl.handle.net/11588/899488
https://doi.org/10.1111/mec.16553
genre Ocean acidification
genre_facet Ocean acidification
op_relation info:eu-repo/semantics/altIdentifier/wos/WOS:000812867100001
volume:31
issue:14
firstpage:3844
lastpage:3858
numberofpages:15
journal:MOLECULAR ECOLOGY
https://hdl.handle.net/11588/899488
doi:10.1111/mec.16553
info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-85132327033
op_doi https://doi.org/10.1111/mec.16553
container_title Molecular Ecology
container_volume 31
container_issue 14
container_start_page 3844
op_container_end_page 3858
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