Comparative Metagenomics of Eight Geographically Remote Terrestrial Hot Springs.

Hot springs are natural habitats for thermophilic Archaea and Bacteria. In this paper, we present the metagenomic analysis of eight globally distributed terrestrial hot springs from China, Iceland, Italy, Russia, and the USA with a temperature range between 61 and 92 (∘)C and pH between 1.8 and 7. A...

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Published in:Microbial Ecology
Main Authors: Patrizia Contursi, Marco Moracci
Other Authors: Contursi, Patrizia, Moracci, Marco
Format: Article in Journal/Newspaper
Language:unknown
Published: 2015
Subjects:
Online Access:http://hdl.handle.net/11588/619113
https://doi.org/10.1007/s00248-015-0576-9
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spelling ftunivnapoliiris:oai:www.iris.unina.it:11588/619113 2024-09-09T19:47:15+00:00 Comparative Metagenomics of Eight Geographically Remote Terrestrial Hot Springs. Patrizia Contursi Marco Moracci Contursi, Patrizia Moracci, Marco 2015 http://hdl.handle.net/11588/619113 https://doi.org/10.1007/s00248-015-0576-9 unknown info:eu-repo/semantics/altIdentifier/wos/WOS:000357680900011 volume:70 issue:2 firstpage:411 lastpage:424 numberofpages:14 journal:MICROBIAL ECOLOGY http://hdl.handle.net/11588/619113 doi:10.1007/s00248-015-0576-9 info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-84937252247 info:eu-repo/semantics/restrictedAccess metagenomic analysis Terrestrial Hot Springs Archaea info:eu-repo/semantics/article 2015 ftunivnapoliiris https://doi.org/10.1007/s00248-015-0576-9 2024-06-17T15:19:32Z Hot springs are natural habitats for thermophilic Archaea and Bacteria. In this paper, we present the metagenomic analysis of eight globally distributed terrestrial hot springs from China, Iceland, Italy, Russia, and the USA with a temperature range between 61 and 92 (∘)C and pH between 1.8 and 7. A comparison of the biodiversity and community composition generally showed a decrease in biodiversity with increasing temperature and decreasing pH. Another important factor shaping microbial diversity of the studied sites was the abundance of organic substrates. Several species of the Crenarchaeal order Thermoprotei were detected, whereas no single bacterial species was found in all samples, suggesting a better adaptation of certain archaeal species to different thermophilic environments. Two hot springs show high abundance of Acidithiobacillus, supporting the idea of a true thermophilic Acidithiobacillus species that can thrive in hyperthermophilic environments. Depending on the sample, up to 58 % of sequencing reads could not be assigned to a known phylum, reinforcing the fact that a large number of microorganisms in nature, including those thriving in hot environments remain to be isolated and characterized. Article in Journal/Newspaper Iceland IRIS Università degli Studi di Napoli Federico II Microbial Ecology 70 2 411 424
institution Open Polar
collection IRIS Università degli Studi di Napoli Federico II
op_collection_id ftunivnapoliiris
language unknown
topic metagenomic analysis
Terrestrial Hot Springs
Archaea
spellingShingle metagenomic analysis
Terrestrial Hot Springs
Archaea
Patrizia Contursi
Marco Moracci
Comparative Metagenomics of Eight Geographically Remote Terrestrial Hot Springs.
topic_facet metagenomic analysis
Terrestrial Hot Springs
Archaea
description Hot springs are natural habitats for thermophilic Archaea and Bacteria. In this paper, we present the metagenomic analysis of eight globally distributed terrestrial hot springs from China, Iceland, Italy, Russia, and the USA with a temperature range between 61 and 92 (∘)C and pH between 1.8 and 7. A comparison of the biodiversity and community composition generally showed a decrease in biodiversity with increasing temperature and decreasing pH. Another important factor shaping microbial diversity of the studied sites was the abundance of organic substrates. Several species of the Crenarchaeal order Thermoprotei were detected, whereas no single bacterial species was found in all samples, suggesting a better adaptation of certain archaeal species to different thermophilic environments. Two hot springs show high abundance of Acidithiobacillus, supporting the idea of a true thermophilic Acidithiobacillus species that can thrive in hyperthermophilic environments. Depending on the sample, up to 58 % of sequencing reads could not be assigned to a known phylum, reinforcing the fact that a large number of microorganisms in nature, including those thriving in hot environments remain to be isolated and characterized.
author2 Contursi, Patrizia
Moracci, Marco
format Article in Journal/Newspaper
author Patrizia Contursi
Marco Moracci
author_facet Patrizia Contursi
Marco Moracci
author_sort Patrizia Contursi
title Comparative Metagenomics of Eight Geographically Remote Terrestrial Hot Springs.
title_short Comparative Metagenomics of Eight Geographically Remote Terrestrial Hot Springs.
title_full Comparative Metagenomics of Eight Geographically Remote Terrestrial Hot Springs.
title_fullStr Comparative Metagenomics of Eight Geographically Remote Terrestrial Hot Springs.
title_full_unstemmed Comparative Metagenomics of Eight Geographically Remote Terrestrial Hot Springs.
title_sort comparative metagenomics of eight geographically remote terrestrial hot springs.
publishDate 2015
url http://hdl.handle.net/11588/619113
https://doi.org/10.1007/s00248-015-0576-9
genre Iceland
genre_facet Iceland
op_relation info:eu-repo/semantics/altIdentifier/wos/WOS:000357680900011
volume:70
issue:2
firstpage:411
lastpage:424
numberofpages:14
journal:MICROBIAL ECOLOGY
http://hdl.handle.net/11588/619113
doi:10.1007/s00248-015-0576-9
info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-84937252247
op_rights info:eu-repo/semantics/restrictedAccess
op_doi https://doi.org/10.1007/s00248-015-0576-9
container_title Microbial Ecology
container_volume 70
container_issue 2
container_start_page 411
op_container_end_page 424
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