Myctobase, a circumpolar database of mesopelagic fishes for new insights into deep pelagic prey fields

International audience Abstract The global importance of mesopelagic fish is increasingly recognised, but they remain poorly studied. This is particularly true in the Southern Ocean, where mesopelagic fishes are both key predators and prey, but where the remote environment makes sampling challenging...

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Published in:Scientific Data
Main Authors: Woods, Briannyn, Trebilco, Rowan, Walters, Andrea, Hindell, Mark, Duhamel, Guy, Flores, Hauke, Moteki, Masato, Pruvost, Patrice, Reiss, Christian, Saunders, Ryan, Sutton, Caroline, Gan, Yi-Ming, van de Putte, Anton
Other Authors: Laboratoire d'Ichtyologie générale et appliquée, Muséum national d'Histoire naturelle (MNHN), Biologie des Organismes et Ecosystèmes Aquatiques (BOREA), Université de Caen Normandie (UNICAEN), Normandie Université (NU)-Normandie Université (NU)-Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA)
Format: Article in Journal/Newspaper
Language:English
Published: HAL CCSD 2022
Subjects:
Online Access:https://hal-mnhn.archives-ouvertes.fr/mnhn-03830695
https://doi.org/10.1038/s41597-022-01496-y
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spelling ftunivnantes:oai:HAL:mnhn-03830695v1 2023-05-15T13:46:09+02:00 Myctobase, a circumpolar database of mesopelagic fishes for new insights into deep pelagic prey fields Woods, Briannyn Trebilco, Rowan Walters, Andrea Hindell, Mark Duhamel, Guy Flores, Hauke Moteki, Masato Pruvost, Patrice Reiss, Christian Saunders, Ryan Sutton, Caroline Gan, Yi-Ming van de Putte, Anton Laboratoire d'Ichtyologie générale et appliquée Muséum national d'Histoire naturelle (MNHN) Biologie des Organismes et Ecosystèmes Aquatiques (BOREA) Université de Caen Normandie (UNICAEN) Normandie Université (NU)-Normandie Université (NU)-Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA) 2022-12 https://hal-mnhn.archives-ouvertes.fr/mnhn-03830695 https://doi.org/10.1038/s41597-022-01496-y en eng HAL CCSD Nature Publishing Group info:eu-repo/semantics/altIdentifier/doi/10.1038/s41597-022-01496-y mnhn-03830695 https://hal-mnhn.archives-ouvertes.fr/mnhn-03830695 doi:10.1038/s41597-022-01496-y ISSN: 2052-4463 EISSN: 2052-4463 Scientific Data https://hal-mnhn.archives-ouvertes.fr/mnhn-03830695 Scientific Data , 2022, 9 (1), pp.404. ⟨10.1038/s41597-022-01496-y⟩ [SDE.BE]Environmental Sciences/Biodiversity and Ecology [SDE.MCG]Environmental Sciences/Global Changes [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM] info:eu-repo/semantics/article Journal articles 2022 ftunivnantes https://doi.org/10.1038/s41597-022-01496-y 2023-02-08T02:15:42Z International audience Abstract The global importance of mesopelagic fish is increasingly recognised, but they remain poorly studied. This is particularly true in the Southern Ocean, where mesopelagic fishes are both key predators and prey, but where the remote environment makes sampling challenging. Despite this, multiple national Antarctic research programs have undertaken regional sampling of mesopelagic fish over several decades. However, data are dispersed, and sampling methodologies often differ precluding comparisons and limiting synthetic analyses. We identified potential data holders by compiling a metadata catalogue of existing survey data for Southern Ocean mesopelagic fishes. Data holders contributed 17,491 occurrence and 11,190 abundance records from 4780 net hauls from 72 different research cruises. Data span across 37 years from 1991 to 2019 and include trait-based information (length, weight, maturity). The final dataset underwent quality control processes and detailed metadata was provided for each sampling event. This dataset can be accessed through Zenodo. Myctobase will enhance research capacity by providing the broadscale baseline data necessary for observing and modelling mesopelagic fishes. Article in Journal/Newspaper Antarc* Antarctic Southern Ocean Université de Nantes: HAL-UNIV-NANTES Antarctic Southern Ocean Scientific Data 9 1
institution Open Polar
collection Université de Nantes: HAL-UNIV-NANTES
op_collection_id ftunivnantes
language English
topic [SDE.BE]Environmental Sciences/Biodiversity and Ecology
[SDE.MCG]Environmental Sciences/Global Changes
[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]
spellingShingle [SDE.BE]Environmental Sciences/Biodiversity and Ecology
[SDE.MCG]Environmental Sciences/Global Changes
[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]
Woods, Briannyn
Trebilco, Rowan
Walters, Andrea
Hindell, Mark
Duhamel, Guy
Flores, Hauke
Moteki, Masato
Pruvost, Patrice
Reiss, Christian
Saunders, Ryan
Sutton, Caroline
Gan, Yi-Ming
van de Putte, Anton
Myctobase, a circumpolar database of mesopelagic fishes for new insights into deep pelagic prey fields
topic_facet [SDE.BE]Environmental Sciences/Biodiversity and Ecology
[SDE.MCG]Environmental Sciences/Global Changes
[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]
description International audience Abstract The global importance of mesopelagic fish is increasingly recognised, but they remain poorly studied. This is particularly true in the Southern Ocean, where mesopelagic fishes are both key predators and prey, but where the remote environment makes sampling challenging. Despite this, multiple national Antarctic research programs have undertaken regional sampling of mesopelagic fish over several decades. However, data are dispersed, and sampling methodologies often differ precluding comparisons and limiting synthetic analyses. We identified potential data holders by compiling a metadata catalogue of existing survey data for Southern Ocean mesopelagic fishes. Data holders contributed 17,491 occurrence and 11,190 abundance records from 4780 net hauls from 72 different research cruises. Data span across 37 years from 1991 to 2019 and include trait-based information (length, weight, maturity). The final dataset underwent quality control processes and detailed metadata was provided for each sampling event. This dataset can be accessed through Zenodo. Myctobase will enhance research capacity by providing the broadscale baseline data necessary for observing and modelling mesopelagic fishes.
author2 Laboratoire d'Ichtyologie générale et appliquée
Muséum national d'Histoire naturelle (MNHN)
Biologie des Organismes et Ecosystèmes Aquatiques (BOREA)
Université de Caen Normandie (UNICAEN)
Normandie Université (NU)-Normandie Université (NU)-Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA)
format Article in Journal/Newspaper
author Woods, Briannyn
Trebilco, Rowan
Walters, Andrea
Hindell, Mark
Duhamel, Guy
Flores, Hauke
Moteki, Masato
Pruvost, Patrice
Reiss, Christian
Saunders, Ryan
Sutton, Caroline
Gan, Yi-Ming
van de Putte, Anton
author_facet Woods, Briannyn
Trebilco, Rowan
Walters, Andrea
Hindell, Mark
Duhamel, Guy
Flores, Hauke
Moteki, Masato
Pruvost, Patrice
Reiss, Christian
Saunders, Ryan
Sutton, Caroline
Gan, Yi-Ming
van de Putte, Anton
author_sort Woods, Briannyn
title Myctobase, a circumpolar database of mesopelagic fishes for new insights into deep pelagic prey fields
title_short Myctobase, a circumpolar database of mesopelagic fishes for new insights into deep pelagic prey fields
title_full Myctobase, a circumpolar database of mesopelagic fishes for new insights into deep pelagic prey fields
title_fullStr Myctobase, a circumpolar database of mesopelagic fishes for new insights into deep pelagic prey fields
title_full_unstemmed Myctobase, a circumpolar database of mesopelagic fishes for new insights into deep pelagic prey fields
title_sort myctobase, a circumpolar database of mesopelagic fishes for new insights into deep pelagic prey fields
publisher HAL CCSD
publishDate 2022
url https://hal-mnhn.archives-ouvertes.fr/mnhn-03830695
https://doi.org/10.1038/s41597-022-01496-y
geographic Antarctic
Southern Ocean
geographic_facet Antarctic
Southern Ocean
genre Antarc*
Antarctic
Southern Ocean
genre_facet Antarc*
Antarctic
Southern Ocean
op_source ISSN: 2052-4463
EISSN: 2052-4463
Scientific Data
https://hal-mnhn.archives-ouvertes.fr/mnhn-03830695
Scientific Data , 2022, 9 (1), pp.404. ⟨10.1038/s41597-022-01496-y⟩
op_relation info:eu-repo/semantics/altIdentifier/doi/10.1038/s41597-022-01496-y
mnhn-03830695
https://hal-mnhn.archives-ouvertes.fr/mnhn-03830695
doi:10.1038/s41597-022-01496-y
op_doi https://doi.org/10.1038/s41597-022-01496-y
container_title Scientific Data
container_volume 9
container_issue 1
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