Genome size and chromosome number of ten plant species from Kerguelen Islands
Place: New York Publisher: Springer WOS:000578347700001 International audience Kerguelen Islands harbor a unique, probably very ancient flora with a high rate of endemism. However, the evolutionary history and characteristics of this flora still require investigation. This concerns in particular gen...
Published in: | Polar Biology |
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Main Authors: | , , , , , , |
Other Authors: | , , , , , , , , , , , , , , , , , , |
Format: | Article in Journal/Newspaper |
Language: | English |
Published: |
HAL CCSD
2020
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Subjects: | |
Online Access: | https://hal.science/hal-02985456 https://hal.science/hal-02985456/document https://hal.science/hal-02985456/file/Siljak-Yakovlev%20et%20al-2020-Genome%20size%20and%20chromosome%20number%20of%20ten%20plant%20species-clean%20Revised%20Manuscript.pdf https://doi.org/10.1007/s00300-020-02755-7 |
id |
ftunivnantes:oai:HAL:hal-02985456v1 |
---|---|
record_format |
openpolar |
institution |
Open Polar |
collection |
Université de Nantes: HAL-UNIV-NANTES |
op_collection_id |
ftunivnantes |
language |
English |
topic |
evolution polyploidy Flow cytometry 2C DNA value Genome size nuclear-dna content angiosperms brassicaceae c-values climate constraint hypothesis Endemic species festuca-pallens indian-ocean Ploidy level Sub-Antarctic flora [SDV]Life Sciences [q-bio] |
spellingShingle |
evolution polyploidy Flow cytometry 2C DNA value Genome size nuclear-dna content angiosperms brassicaceae c-values climate constraint hypothesis Endemic species festuca-pallens indian-ocean Ploidy level Sub-Antarctic flora [SDV]Life Sciences [q-bio] Siljak-Yakovlev, Sonja Lamy, Francoise Takvorian, Najat Valentin, Nicolas Gouesbet, Valerie Hennion, Françoise Robert, Thierry Genome size and chromosome number of ten plant species from Kerguelen Islands |
topic_facet |
evolution polyploidy Flow cytometry 2C DNA value Genome size nuclear-dna content angiosperms brassicaceae c-values climate constraint hypothesis Endemic species festuca-pallens indian-ocean Ploidy level Sub-Antarctic flora [SDV]Life Sciences [q-bio] |
description |
Place: New York Publisher: Springer WOS:000578347700001 International audience Kerguelen Islands harbor a unique, probably very ancient flora with a high rate of endemism. However, the evolutionary history and characteristics of this flora still require investigation. This concerns in particular genome size and ploidy level variation, despite the evolutionary and ecological significance of those traits. Here we report the first assessment of genome size, using flow cytometry, for eight plant species of which two are endemics of Kerguelen Islands and four of the South Indian Ocean Province. The 2C DNA value ranged from 1.08 pg for Pringlea antiscorbutica to 11.88 pg for Ranunculus biternatus. The chromosome numbers of Colobanthus kerguelensis (2n = 80), Lyallia kerguelensis (2n = 96) and Poa kerguelensis (2n = 28) were also reported in this study for the first time. Overall, our data allowed to infer that all Kerguelen studied species are polyploid (from tetra- to octopolyploid). Intra-genus comparisons showed significant differences of 2C DNA values among Poa and among Ranunculus species, despite their identical ploidy level. In addition, our data highlight the existence of an intraspecific variability of genome size for the two octoploid species Colobanthus kerguelensis and Lyallia kerguelensis. Finally, our data also support the hypothesis regarding which polyploidy may have played a major role in the adaptation of flowering plants to high latitudes, as it has been suggested for arctic species. Françoise Hennion and Thierry Robert both contributed as senior authors. |
author2 |
Ecologie Systématique et Evolution (ESE) AgroParisTech-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS) Université de Versailles Saint-Quentin-en-Yvelines (UVSQ) Sorbonne Université (SU) Institut de Biologie Intégrative de la Cellule (I2BC) Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS) Cytométrie (CYTO) Département Plateforme (PF I2BC) Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Institut de Biologie Intégrative de la Cellule (I2BC) Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS) Ecosystèmes, biodiversité, évolution Rennes (ECOBIO) Université de Rennes 1 (UR1) Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Institut Ecologie et Environnement (INEE) Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Observatoire des Sciences de l'Univers de Rennes (OSUR) Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2) Université de Rennes (UNIV-RENNES)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2) Université de Rennes (UNIV-RENNES)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Centre National de la Recherche Scientifique (CNRS) Supported by the French Polar Institute (IPEV). This research was also supported by CNRS IRP grant “AntarctPlantAdapt” (F. Hennion). IPEV 1116 PlantEvol |
format |
Article in Journal/Newspaper |
author |
Siljak-Yakovlev, Sonja Lamy, Francoise Takvorian, Najat Valentin, Nicolas Gouesbet, Valerie Hennion, Françoise Robert, Thierry |
author_facet |
Siljak-Yakovlev, Sonja Lamy, Francoise Takvorian, Najat Valentin, Nicolas Gouesbet, Valerie Hennion, Françoise Robert, Thierry |
author_sort |
Siljak-Yakovlev, Sonja |
title |
Genome size and chromosome number of ten plant species from Kerguelen Islands |
title_short |
Genome size and chromosome number of ten plant species from Kerguelen Islands |
title_full |
Genome size and chromosome number of ten plant species from Kerguelen Islands |
title_fullStr |
Genome size and chromosome number of ten plant species from Kerguelen Islands |
title_full_unstemmed |
Genome size and chromosome number of ten plant species from Kerguelen Islands |
title_sort |
genome size and chromosome number of ten plant species from kerguelen islands |
publisher |
HAL CCSD |
publishDate |
2020 |
url |
https://hal.science/hal-02985456 https://hal.science/hal-02985456/document https://hal.science/hal-02985456/file/Siljak-Yakovlev%20et%20al-2020-Genome%20size%20and%20chromosome%20number%20of%20ten%20plant%20species-clean%20Revised%20Manuscript.pdf https://doi.org/10.1007/s00300-020-02755-7 |
long_lat |
ENVELOPE(70.250,70.250,-49.350,-49.350) |
geographic |
Antarctic Arctic Françoise Indian Kerguelen Kerguelen Islands |
geographic_facet |
Antarctic Arctic Françoise Indian Kerguelen Kerguelen Islands |
genre |
Antarc* Antarctic Arctic Kerguelen Islands Polar Biology |
genre_facet |
Antarc* Antarctic Arctic Kerguelen Islands Polar Biology |
op_source |
ISSN: 0722-4060 EISSN: 1432-2056 Polar Biology https://hal.science/hal-02985456 Polar Biology, 2020, 43 (12), pp.1985-1999. ⟨10.1007/s00300-020-02755-7⟩ |
op_relation |
info:eu-repo/semantics/altIdentifier/doi/10.1007/s00300-020-02755-7 hal-02985456 https://hal.science/hal-02985456 https://hal.science/hal-02985456/document https://hal.science/hal-02985456/file/Siljak-Yakovlev%20et%20al-2020-Genome%20size%20and%20chromosome%20number%20of%20ten%20plant%20species-clean%20Revised%20Manuscript.pdf doi:10.1007/s00300-020-02755-7 |
op_rights |
info:eu-repo/semantics/OpenAccess |
op_doi |
https://doi.org/10.1007/s00300-020-02755-7 |
container_title |
Polar Biology |
container_volume |
43 |
container_issue |
12 |
container_start_page |
1985 |
op_container_end_page |
1999 |
_version_ |
1766008227837771776 |
spelling |
ftunivnantes:oai:HAL:hal-02985456v1 2023-05-15T13:30:26+02:00 Genome size and chromosome number of ten plant species from Kerguelen Islands Siljak-Yakovlev, Sonja Lamy, Francoise Takvorian, Najat Valentin, Nicolas Gouesbet, Valerie Hennion, Françoise Robert, Thierry Ecologie Systématique et Evolution (ESE) AgroParisTech-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS) Université de Versailles Saint-Quentin-en-Yvelines (UVSQ) Sorbonne Université (SU) Institut de Biologie Intégrative de la Cellule (I2BC) Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS) Cytométrie (CYTO) Département Plateforme (PF I2BC) Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Institut de Biologie Intégrative de la Cellule (I2BC) Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS) Ecosystèmes, biodiversité, évolution Rennes (ECOBIO) Université de Rennes 1 (UR1) Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Institut Ecologie et Environnement (INEE) Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Observatoire des Sciences de l'Univers de Rennes (OSUR) Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2) Université de Rennes (UNIV-RENNES)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2) Université de Rennes (UNIV-RENNES)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Centre National de la Recherche Scientifique (CNRS) Supported by the French Polar Institute (IPEV). This research was also supported by CNRS IRP grant “AntarctPlantAdapt” (F. Hennion). IPEV 1116 PlantEvol 2020-12 https://hal.science/hal-02985456 https://hal.science/hal-02985456/document https://hal.science/hal-02985456/file/Siljak-Yakovlev%20et%20al-2020-Genome%20size%20and%20chromosome%20number%20of%20ten%20plant%20species-clean%20Revised%20Manuscript.pdf https://doi.org/10.1007/s00300-020-02755-7 en eng HAL CCSD Springer Verlag info:eu-repo/semantics/altIdentifier/doi/10.1007/s00300-020-02755-7 hal-02985456 https://hal.science/hal-02985456 https://hal.science/hal-02985456/document https://hal.science/hal-02985456/file/Siljak-Yakovlev%20et%20al-2020-Genome%20size%20and%20chromosome%20number%20of%20ten%20plant%20species-clean%20Revised%20Manuscript.pdf doi:10.1007/s00300-020-02755-7 info:eu-repo/semantics/OpenAccess ISSN: 0722-4060 EISSN: 1432-2056 Polar Biology https://hal.science/hal-02985456 Polar Biology, 2020, 43 (12), pp.1985-1999. ⟨10.1007/s00300-020-02755-7⟩ evolution polyploidy Flow cytometry 2C DNA value Genome size nuclear-dna content angiosperms brassicaceae c-values climate constraint hypothesis Endemic species festuca-pallens indian-ocean Ploidy level Sub-Antarctic flora [SDV]Life Sciences [q-bio] info:eu-repo/semantics/article Journal articles 2020 ftunivnantes https://doi.org/10.1007/s00300-020-02755-7 2023-02-22T04:28:26Z Place: New York Publisher: Springer WOS:000578347700001 International audience Kerguelen Islands harbor a unique, probably very ancient flora with a high rate of endemism. However, the evolutionary history and characteristics of this flora still require investigation. This concerns in particular genome size and ploidy level variation, despite the evolutionary and ecological significance of those traits. Here we report the first assessment of genome size, using flow cytometry, for eight plant species of which two are endemics of Kerguelen Islands and four of the South Indian Ocean Province. The 2C DNA value ranged from 1.08 pg for Pringlea antiscorbutica to 11.88 pg for Ranunculus biternatus. The chromosome numbers of Colobanthus kerguelensis (2n = 80), Lyallia kerguelensis (2n = 96) and Poa kerguelensis (2n = 28) were also reported in this study for the first time. Overall, our data allowed to infer that all Kerguelen studied species are polyploid (from tetra- to octopolyploid). Intra-genus comparisons showed significant differences of 2C DNA values among Poa and among Ranunculus species, despite their identical ploidy level. In addition, our data highlight the existence of an intraspecific variability of genome size for the two octoploid species Colobanthus kerguelensis and Lyallia kerguelensis. Finally, our data also support the hypothesis regarding which polyploidy may have played a major role in the adaptation of flowering plants to high latitudes, as it has been suggested for arctic species. Françoise Hennion and Thierry Robert both contributed as senior authors. Article in Journal/Newspaper Antarc* Antarctic Arctic Kerguelen Islands Polar Biology Université de Nantes: HAL-UNIV-NANTES Antarctic Arctic Françoise ENVELOPE(70.250,70.250,-49.350,-49.350) Indian Kerguelen Kerguelen Islands Polar Biology 43 12 1985 1999 |