Hierarchical variance decomposition of fish scale growth and age to investigate the relative contributions of readers and scales

Correct estimation of interindividual variability is of primary importance in models aiming to quantify population dynamics. In a fisheries context, individual information such as age and growth is often extracted using scales; however, the rationale for using a given scalimetric method (i.e. number...

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Published in:Marine and Freshwater Research
Main Authors: Aulus Giacosa, Lucie, Aymes, Jean-Christophe, Gaudin, Philippe, Vignon, Matthias
Other Authors: Ecologie Comportementale et Biologie des Populations de Poissons (ECOBIOP), Institut National de la Recherche Agronomique (INRA)-Université de Pau et des Pays de l'Adour (UPPA)
Format: Article in Journal/Newspaper
Language:English
Published: HAL CCSD 2019
Subjects:
Online Access:https://hal.archives-ouvertes.fr/hal-02414999
https://hal.archives-ouvertes.fr/hal-02414999/document
https://hal.archives-ouvertes.fr/hal-02414999/file/2019_Aulus_MarineFreshwaterResearch.pdf
https://doi.org/10.1071/MF19059
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spelling ftunivnantes:oai:HAL:hal-02414999v1 2023-05-15T17:02:06+02:00 Hierarchical variance decomposition of fish scale growth and age to investigate the relative contributions of readers and scales Aulus Giacosa, Lucie Aymes, Jean-Christophe Gaudin, Philippe Vignon, Matthias Ecologie Comportementale et Biologie des Populations de Poissons (ECOBIOP) Institut National de la Recherche Agronomique (INRA)-Université de Pau et des Pays de l'Adour (UPPA) 2019 https://hal.archives-ouvertes.fr/hal-02414999 https://hal.archives-ouvertes.fr/hal-02414999/document https://hal.archives-ouvertes.fr/hal-02414999/file/2019_Aulus_MarineFreshwaterResearch.pdf https://doi.org/10.1071/MF19059 en eng HAL CCSD CSIRO Publishing info:eu-repo/semantics/altIdentifier/doi/10.1071/MF19059 hal-02414999 https://hal.archives-ouvertes.fr/hal-02414999 https://hal.archives-ouvertes.fr/hal-02414999/document https://hal.archives-ouvertes.fr/hal-02414999/file/2019_Aulus_MarineFreshwaterResearch.pdf doi:10.1071/MF19059 PRODINRA: 490035 WOS: 000498228100018 http://creativecommons.org/licenses/by-nc-nd/ info:eu-repo/semantics/OpenAccess CC-BY-NC-ND ISSN: 1323-1650 Marine and Freshwater Research https://hal.archives-ouvertes.fr/hal-02414999 Marine and Freshwater Research, CSIRO Publishing, 2019, 70 (12), pp.1828-1837. ⟨10.1071/MF19059⟩ introduced specie measurement error sampling strategy scalimetry sea trout introduced species population dynamics salmo trutta espèce introduite dynamique des populations scalimétrie erreur de mesure stratégie d'echantillonnage [SDE.BE]Environmental Sciences/Biodiversity and Ecology info:eu-repo/semantics/article Journal articles 2019 ftunivnantes https://doi.org/10.1071/MF19059 2022-11-09T01:21:43Z Correct estimation of interindividual variability is of primary importance in models aiming to quantify population dynamics. In a fisheries context, individual information such as age and growth is often extracted using scales; however, the rationale for using a given scalimetric method (i.e. number of scales per individual and number of readers) is rarely discussed, but different sources of variance may affect the results. As a case study, we used scale growth and age of brown trout (Salmo trutta) caught in the Kerguelen Islands. Based on a nested design (readings of four scales per fish by two independent readers), we decomposed variance in growth and age according to fish (interindividual level), scales (intraindividual level) and readers by using repeatability analysis. The results highlight that most variation is attributable to fish. Readers and scales contribute little to interindividual variance, suggesting that inference was insensitive to intraorganism biological variation. Using additional scales or readers was an inefficient use of sampling resources. We argue that variance decomposition should be widely used for studies aimed at modelling natural variability in life history traits. This would improve our knowledge of the implications of measurement error, helping rationalise and define appropriate sampling strategies Article in Journal/Newspaper Kerguelen Islands Université de Nantes: HAL-UNIV-NANTES Kerguelen Kerguelen Islands Marine and Freshwater Research 70 12 1828
institution Open Polar
collection Université de Nantes: HAL-UNIV-NANTES
op_collection_id ftunivnantes
language English
topic introduced specie
measurement error
sampling strategy
scalimetry
sea trout
introduced species
population dynamics
salmo trutta
espèce introduite
dynamique des populations
scalimétrie
erreur de mesure
stratégie d'echantillonnage
[SDE.BE]Environmental Sciences/Biodiversity and Ecology
spellingShingle introduced specie
measurement error
sampling strategy
scalimetry
sea trout
introduced species
population dynamics
salmo trutta
espèce introduite
dynamique des populations
scalimétrie
erreur de mesure
stratégie d'echantillonnage
[SDE.BE]Environmental Sciences/Biodiversity and Ecology
Aulus Giacosa, Lucie
Aymes, Jean-Christophe
Gaudin, Philippe
Vignon, Matthias
Hierarchical variance decomposition of fish scale growth and age to investigate the relative contributions of readers and scales
topic_facet introduced specie
measurement error
sampling strategy
scalimetry
sea trout
introduced species
population dynamics
salmo trutta
espèce introduite
dynamique des populations
scalimétrie
erreur de mesure
stratégie d'echantillonnage
[SDE.BE]Environmental Sciences/Biodiversity and Ecology
description Correct estimation of interindividual variability is of primary importance in models aiming to quantify population dynamics. In a fisheries context, individual information such as age and growth is often extracted using scales; however, the rationale for using a given scalimetric method (i.e. number of scales per individual and number of readers) is rarely discussed, but different sources of variance may affect the results. As a case study, we used scale growth and age of brown trout (Salmo trutta) caught in the Kerguelen Islands. Based on a nested design (readings of four scales per fish by two independent readers), we decomposed variance in growth and age according to fish (interindividual level), scales (intraindividual level) and readers by using repeatability analysis. The results highlight that most variation is attributable to fish. Readers and scales contribute little to interindividual variance, suggesting that inference was insensitive to intraorganism biological variation. Using additional scales or readers was an inefficient use of sampling resources. We argue that variance decomposition should be widely used for studies aimed at modelling natural variability in life history traits. This would improve our knowledge of the implications of measurement error, helping rationalise and define appropriate sampling strategies
author2 Ecologie Comportementale et Biologie des Populations de Poissons (ECOBIOP)
Institut National de la Recherche Agronomique (INRA)-Université de Pau et des Pays de l'Adour (UPPA)
format Article in Journal/Newspaper
author Aulus Giacosa, Lucie
Aymes, Jean-Christophe
Gaudin, Philippe
Vignon, Matthias
author_facet Aulus Giacosa, Lucie
Aymes, Jean-Christophe
Gaudin, Philippe
Vignon, Matthias
author_sort Aulus Giacosa, Lucie
title Hierarchical variance decomposition of fish scale growth and age to investigate the relative contributions of readers and scales
title_short Hierarchical variance decomposition of fish scale growth and age to investigate the relative contributions of readers and scales
title_full Hierarchical variance decomposition of fish scale growth and age to investigate the relative contributions of readers and scales
title_fullStr Hierarchical variance decomposition of fish scale growth and age to investigate the relative contributions of readers and scales
title_full_unstemmed Hierarchical variance decomposition of fish scale growth and age to investigate the relative contributions of readers and scales
title_sort hierarchical variance decomposition of fish scale growth and age to investigate the relative contributions of readers and scales
publisher HAL CCSD
publishDate 2019
url https://hal.archives-ouvertes.fr/hal-02414999
https://hal.archives-ouvertes.fr/hal-02414999/document
https://hal.archives-ouvertes.fr/hal-02414999/file/2019_Aulus_MarineFreshwaterResearch.pdf
https://doi.org/10.1071/MF19059
geographic Kerguelen
Kerguelen Islands
geographic_facet Kerguelen
Kerguelen Islands
genre Kerguelen Islands
genre_facet Kerguelen Islands
op_source ISSN: 1323-1650
Marine and Freshwater Research
https://hal.archives-ouvertes.fr/hal-02414999
Marine and Freshwater Research, CSIRO Publishing, 2019, 70 (12), pp.1828-1837. ⟨10.1071/MF19059⟩
op_relation info:eu-repo/semantics/altIdentifier/doi/10.1071/MF19059
hal-02414999
https://hal.archives-ouvertes.fr/hal-02414999
https://hal.archives-ouvertes.fr/hal-02414999/document
https://hal.archives-ouvertes.fr/hal-02414999/file/2019_Aulus_MarineFreshwaterResearch.pdf
doi:10.1071/MF19059
PRODINRA: 490035
WOS: 000498228100018
op_rights http://creativecommons.org/licenses/by-nc-nd/
info:eu-repo/semantics/OpenAccess
op_rightsnorm CC-BY-NC-ND
op_doi https://doi.org/10.1071/MF19059
container_title Marine and Freshwater Research
container_volume 70
container_issue 12
container_start_page 1828
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