Enzymatic synthesis of model substrates recognized by glucuronoyl esterases from [i]Podospora anserina[/i] and [i]Myceliophthora thermophila[/i]
Glucuronoyl esterases (GEs) are recently discovered enzymes that are suggested to cleave the ester bond between lignin alcohols and xylan-bound 4-O-methyl-d-glucuronic acid. Although their potential use for enhanced enzymatic biomass degradation and synthesis of valuable chemicals renders them attra...
Published in: | Applied Microbiology and Biotechnology |
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ftunivnantes:oai:HAL:hal-01268764v1 2023-05-15T13:50:05+02:00 Enzymatic synthesis of model substrates recognized by glucuronoyl esterases from [i]Podospora anserina[/i] and [i]Myceliophthora thermophila[/i] Katsimpouras, Constantinos Benarouche, Anaïs Navarro, David Karpusas, Michael Dimarogona, Maria Berrin, Jean-Guy Christakopoulos, Paul Topakas, Evangelos School of Chemical Engineering, Biotechnology Laboratory National Technical University of Athens Athens (NTUA) Biodiversité et Biotechnologie Fongiques (BBF) Institut National de la Recherche Agronomique (INRA)-Aix Marseille Université (AMU)-École Centrale de Marseille (ECM) Department of Biotechnology, Physics Laboratory Agricultural University of Athens Department of Civil Environmental and Natural Resources Engineering, Division of Sustainable Process Engineering Luleå University of Technology (LUT) General Secretariat of Research and Technology (GSRT) of Greece-ESPA 2014 https://hal.archives-ouvertes.fr/hal-01268764 https://doi.org/10.1007/s00253-014-5542-9 en eng HAL CCSD Springer Verlag info:eu-repo/semantics/altIdentifier/doi/10.1007/s00253-014-5542-9 info:eu-repo/semantics/altIdentifier/pmid/24531271 hal-01268764 https://hal.archives-ouvertes.fr/hal-01268764 doi:10.1007/s00253-014-5542-9 PRODINRA: 272510 PUBMED: 24531271 WOS: 000337038500017 ISSN: 0175-7598 EISSN: 1432-0614 Applied Microbiology and Biotechnology https://hal.archives-ouvertes.fr/hal-01268764 Applied Microbiology and Biotechnology, Springer Verlag, 2014, 98 (12), pp.5507-5516. ⟨10.1007/s00253-014-5542-9⟩ http://link.springer.com/journal/253 Glucuronoyl esterase Myceliophthora thermophila Podospora anserina Pichia pastoris Substrate specificity Aryl alkyl or alkenyl D-glucuronates [SDV]Life Sciences [q-bio] info:eu-repo/semantics/article Journal articles 2014 ftunivnantes https://doi.org/10.1007/s00253-014-5542-9 2022-08-10T07:34:39Z Glucuronoyl esterases (GEs) are recently discovered enzymes that are suggested to cleave the ester bond between lignin alcohols and xylan-bound 4-O-methyl-d-glucuronic acid. Although their potential use for enhanced enzymatic biomass degradation and synthesis of valuable chemicals renders them attractive research targets for biotechnological applications, the difficulty to purify natural fractions of lignin-carbohydrate complexes hampers the characterization of fungal GEs. In this work, we report the synthesis of three aryl alkyl or alkenyl d-glucuronate esters using lipase B from Candida antarctica (CALB) and their use to determine the kinetic parameters of two GEs, StGE2 from the thermophilic fungus Myceliophthora thermophila (syn. Sporotrichum thermophile) and PaGE1 from the coprophilous fungus Podospora anserina. PaGE1 was functionally expressed in the methylotrophic yeast Pichia pastoris under the transcriptional control of the alcohol oxidase (AOX1) promoter and purified to its homogeneity (63 kDa). The three d-glucuronate esters contain an aromatic UV-absorbing phenol group that facilitates the quantification of their enzymatic hydrolysis by HPLC. Both enzymes were able to hydrolyze the synthetic esters with a pronounced preference towards the cinnamyl-d-glucuronate ester. The experimental results were corroborated by computational docking of the synthesized substrate analogues. We show that the nature of the alcohol portion of the hydrolyzed ester influences the catalytic efficiency of the two GEs. Article in Journal/Newspaper Antarc* Antarctica Université de Nantes: HAL-UNIV-NANTES Applied Microbiology and Biotechnology 98 12 5507 5516 |
institution |
Open Polar |
collection |
Université de Nantes: HAL-UNIV-NANTES |
op_collection_id |
ftunivnantes |
language |
English |
topic |
Glucuronoyl esterase Myceliophthora thermophila Podospora anserina Pichia pastoris Substrate specificity Aryl alkyl or alkenyl D-glucuronates [SDV]Life Sciences [q-bio] |
spellingShingle |
Glucuronoyl esterase Myceliophthora thermophila Podospora anserina Pichia pastoris Substrate specificity Aryl alkyl or alkenyl D-glucuronates [SDV]Life Sciences [q-bio] Katsimpouras, Constantinos Benarouche, Anaïs Navarro, David Karpusas, Michael Dimarogona, Maria Berrin, Jean-Guy Christakopoulos, Paul Topakas, Evangelos Enzymatic synthesis of model substrates recognized by glucuronoyl esterases from [i]Podospora anserina[/i] and [i]Myceliophthora thermophila[/i] |
topic_facet |
Glucuronoyl esterase Myceliophthora thermophila Podospora anserina Pichia pastoris Substrate specificity Aryl alkyl or alkenyl D-glucuronates [SDV]Life Sciences [q-bio] |
description |
Glucuronoyl esterases (GEs) are recently discovered enzymes that are suggested to cleave the ester bond between lignin alcohols and xylan-bound 4-O-methyl-d-glucuronic acid. Although their potential use for enhanced enzymatic biomass degradation and synthesis of valuable chemicals renders them attractive research targets for biotechnological applications, the difficulty to purify natural fractions of lignin-carbohydrate complexes hampers the characterization of fungal GEs. In this work, we report the synthesis of three aryl alkyl or alkenyl d-glucuronate esters using lipase B from Candida antarctica (CALB) and their use to determine the kinetic parameters of two GEs, StGE2 from the thermophilic fungus Myceliophthora thermophila (syn. Sporotrichum thermophile) and PaGE1 from the coprophilous fungus Podospora anserina. PaGE1 was functionally expressed in the methylotrophic yeast Pichia pastoris under the transcriptional control of the alcohol oxidase (AOX1) promoter and purified to its homogeneity (63 kDa). The three d-glucuronate esters contain an aromatic UV-absorbing phenol group that facilitates the quantification of their enzymatic hydrolysis by HPLC. Both enzymes were able to hydrolyze the synthetic esters with a pronounced preference towards the cinnamyl-d-glucuronate ester. The experimental results were corroborated by computational docking of the synthesized substrate analogues. We show that the nature of the alcohol portion of the hydrolyzed ester influences the catalytic efficiency of the two GEs. |
author2 |
School of Chemical Engineering, Biotechnology Laboratory National Technical University of Athens Athens (NTUA) Biodiversité et Biotechnologie Fongiques (BBF) Institut National de la Recherche Agronomique (INRA)-Aix Marseille Université (AMU)-École Centrale de Marseille (ECM) Department of Biotechnology, Physics Laboratory Agricultural University of Athens Department of Civil Environmental and Natural Resources Engineering, Division of Sustainable Process Engineering Luleå University of Technology (LUT) General Secretariat of Research and Technology (GSRT) of Greece-ESPA |
format |
Article in Journal/Newspaper |
author |
Katsimpouras, Constantinos Benarouche, Anaïs Navarro, David Karpusas, Michael Dimarogona, Maria Berrin, Jean-Guy Christakopoulos, Paul Topakas, Evangelos |
author_facet |
Katsimpouras, Constantinos Benarouche, Anaïs Navarro, David Karpusas, Michael Dimarogona, Maria Berrin, Jean-Guy Christakopoulos, Paul Topakas, Evangelos |
author_sort |
Katsimpouras, Constantinos |
title |
Enzymatic synthesis of model substrates recognized by glucuronoyl esterases from [i]Podospora anserina[/i] and [i]Myceliophthora thermophila[/i] |
title_short |
Enzymatic synthesis of model substrates recognized by glucuronoyl esterases from [i]Podospora anserina[/i] and [i]Myceliophthora thermophila[/i] |
title_full |
Enzymatic synthesis of model substrates recognized by glucuronoyl esterases from [i]Podospora anserina[/i] and [i]Myceliophthora thermophila[/i] |
title_fullStr |
Enzymatic synthesis of model substrates recognized by glucuronoyl esterases from [i]Podospora anserina[/i] and [i]Myceliophthora thermophila[/i] |
title_full_unstemmed |
Enzymatic synthesis of model substrates recognized by glucuronoyl esterases from [i]Podospora anserina[/i] and [i]Myceliophthora thermophila[/i] |
title_sort |
enzymatic synthesis of model substrates recognized by glucuronoyl esterases from [i]podospora anserina[/i] and [i]myceliophthora thermophila[/i] |
publisher |
HAL CCSD |
publishDate |
2014 |
url |
https://hal.archives-ouvertes.fr/hal-01268764 https://doi.org/10.1007/s00253-014-5542-9 |
genre |
Antarc* Antarctica |
genre_facet |
Antarc* Antarctica |
op_source |
ISSN: 0175-7598 EISSN: 1432-0614 Applied Microbiology and Biotechnology https://hal.archives-ouvertes.fr/hal-01268764 Applied Microbiology and Biotechnology, Springer Verlag, 2014, 98 (12), pp.5507-5516. ⟨10.1007/s00253-014-5542-9⟩ http://link.springer.com/journal/253 |
op_relation |
info:eu-repo/semantics/altIdentifier/doi/10.1007/s00253-014-5542-9 info:eu-repo/semantics/altIdentifier/pmid/24531271 hal-01268764 https://hal.archives-ouvertes.fr/hal-01268764 doi:10.1007/s00253-014-5542-9 PRODINRA: 272510 PUBMED: 24531271 WOS: 000337038500017 |
op_doi |
https://doi.org/10.1007/s00253-014-5542-9 |
container_title |
Applied Microbiology and Biotechnology |
container_volume |
98 |
container_issue |
12 |
container_start_page |
5507 |
op_container_end_page |
5516 |
_version_ |
1766252890472579072 |