Reconstructing Native American population history.

International audience The peopling of the Americas has been the subject of extensive genetic, archaeological and linguistic research; however, central questions remain unresolved. One contentious issue is whether the settlement occurred by means of a single migration or multiple streams of migratio...

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Published in:Nature
Main Authors: Reich, David, Patterson, Nick, Campbell, Desmond, Tandon, Arti, Mazières, Stéphane, Ray, Nicolas, Parra, Maria V, Rojas, Winston, Duque, Constanza, Mesa, Natalia, García, Luis F, Triana, Omar, Blair, Silvia, Maestre, Amanda, Dib, Juan C, Bravi, Claudio M, Bailliet, Graciela, Corach, Daniel, Hünemeier, Tábita, Bortolini, Maria Cátira, Salzano, Francisco M, Petzl-Erler, María Luiza, Acuña-Alonzo, Victor, Aguilar-Salinas, Carlos, Canizales-Quinteros, Samuel, Tusié-Luna, Teresa, Riba, Laura, Rodríguez-Cruz, Maricela, Lopez-Alarcón, Mardia, Coral-Vazquez, Ramón, Canto-Cetina, Thelma, Silva-Zolezzi, Irma, Fernandez-Lopez, Juan Carlos, Contreras, Alejandra V, Jimenez-Sanchez, Gerardo, Gómez-Vázquez, Maria José, Molina, Julio, Carracedo, Ángel, Salas, Antonio, Gallo, Carla, Poletti, Giovanni, Witonsky, David B, Alkorta-Aranburu, Gorka, Sukernik, Rem I, Osipova, Ludmila, Fedorova, Sardana A, Vasquez, René, Villena, Mercedes, Moreau, Claudia, Barrantes, Ramiro
Other Authors: Broad Institute of MIT and Harvard (BROAD INSTITUTE), Harvard Medical School Boston (HMS)-Massachusetts Institute of Technology (MIT)-Massachusetts General Hospital Boston, Department of Genetics Boston, Harvard Medical School Boston (HMS), Department of Psychiatry and Centre for Genomic Sciences, The University of Hong Kong (HKU), Dept of Genetics, Evolution and Environment London (UCL-GEE), University College of London London (UCL), Anthropologie bio-culturelle, Droit, Ethique et Santé (ADES), Aix Marseille Université (AMU)-EFS ALPES MEDITERRANEE-Centre National de la Recherche Scientifique (CNRS), EnviroSPACE Laboratory - Forel Institute, Institute for Environmental Sciences Geneva (ISE), Université de Genève = University of Geneva (UNIGE)-Université de Genève = University of Geneva (UNIGE), Laboratorio de Genética Molecular, Universidad de Antioquia = University of Antioquia Medellín, Colombia, Universidad de Antoquia, Grupo Salud y Comunidad, Universidad de Antioquia = University of Antioquia Medellín, Colombia -Facultad de Medicina, Fundacion Salud para el Tropico, Instituto Multidisciplinario de Biología Celular La Plata (IMBICE), Consejo Nacional de Investigaciones Científicas y Técnicas Buenos Aires (CONICET)-Universidad Nacional de la Plata Argentine (UNLP)-Comisión de Investigaciones Científicas Buenos Aires (CIC), Servicio de Huellas Digitales Genéticas Buenos Aires, Facultad de Farmacia y Bioquímica Buenos Aires (FFYB), Universidad de Buenos Aires Buenos Aires (UBA)-Universidad de Buenos Aires Buenos Aires (UBA), Departamento de Genética, Universidade Federal do Rio Grande do Sul Porto Alegre (UFRGS)-Instituto de Biociencias, Universidade Federal do Parana Curitiba (UFPR), Universidade Federal do Paraná (UFPR), Molecular Genetics Laboratory, Escuela Nacional de Antropologia y Historia, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán - National Institute of Medical Science and Nutrition Salvador Zubiran Mexico, Unit of Molecular Biology and Genomic Medicine, Departamento de Biologìa, Facultad de Quìmica, Universidad Nacional Autónoma de México = National Autonomous University of Mexico (UNAM), Instituto Mexicano del Seguro Social Mexico City, Mexico (IMSS), Unidad de Investigacion Medica en Genetica Humana, Hospital de pediatria, Centro Medico Nacional Siglo WXI-IMSS, Escuela Superior de Medicina del Instituto Politecnico Nacional, Escuela Superior de Medicina del Instituto Politecnico Nacional, Laboratorio de Biologıa de la Reproduccion, Centro de Investigaciones Regionales, Instituto Nacional de Medicina Genomica, Universidad Autonoma de Nuevo Leon Mexique (UANL), Centro de Investigaciones Biomédicas de Guatemala, Grupo de Medicina Xenómica-Institute of Legal Medicine-CIBERER, Universidade de Santiago de Compostela Spain (USC ), Pathology Department, Hospital Universitari Mútua de Terrassa, Department of Human Genetics, University of Chicago
Format: Article in Journal/Newspaper
Language:English
Published: HAL CCSD 2012
Subjects:
Online Access:https://hal.science/hal-00726962
https://hal.science/hal-00726962/document
https://hal.science/hal-00726962/file/Reich_et_al_FullSubmission_2011_08_10709A.pdf
https://doi.org/10.1038/nature11258
id ftunivnantes:oai:HAL:hal-00726962v1
record_format openpolar
institution Open Polar
collection Université de Nantes: HAL-UNIV-NANTES
op_collection_id ftunivnantes
language English
topic [SHS.ANTHRO-BIO]Humanities and Social Sciences/Biological anthropology
[SDV.GEN.GH]Life Sciences [q-bio]/Genetics/Human genetics
spellingShingle [SHS.ANTHRO-BIO]Humanities and Social Sciences/Biological anthropology
[SDV.GEN.GH]Life Sciences [q-bio]/Genetics/Human genetics
Reich, David
Patterson, Nick
Campbell, Desmond
Tandon, Arti
Mazières, Stéphane
Ray, Nicolas
Parra, Maria V
Rojas, Winston
Duque, Constanza
Mesa, Natalia
García, Luis F
Triana, Omar
Blair, Silvia
Maestre, Amanda
Dib, Juan C
Bravi, Claudio M
Bailliet, Graciela
Corach, Daniel
Hünemeier, Tábita
Bortolini, Maria Cátira
Salzano, Francisco M
Petzl-Erler, María Luiza
Acuña-Alonzo, Victor
Aguilar-Salinas, Carlos
Canizales-Quinteros, Samuel
Tusié-Luna, Teresa
Riba, Laura
Rodríguez-Cruz, Maricela
Lopez-Alarcón, Mardia
Coral-Vazquez, Ramón
Canto-Cetina, Thelma
Silva-Zolezzi, Irma
Fernandez-Lopez, Juan Carlos
Contreras, Alejandra V
Jimenez-Sanchez, Gerardo
Gómez-Vázquez, Maria José
Molina, Julio
Carracedo, Ángel
Salas, Antonio
Gallo, Carla
Poletti, Giovanni
Witonsky, David B
Alkorta-Aranburu, Gorka
Sukernik, Rem I
Osipova, Ludmila
Fedorova, Sardana A
Vasquez, René
Villena, Mercedes
Moreau, Claudia
Barrantes, Ramiro
Reconstructing Native American population history.
topic_facet [SHS.ANTHRO-BIO]Humanities and Social Sciences/Biological anthropology
[SDV.GEN.GH]Life Sciences [q-bio]/Genetics/Human genetics
description International audience The peopling of the Americas has been the subject of extensive genetic, archaeological and linguistic research; however, central questions remain unresolved. One contentious issue is whether the settlement occurred by means of a single migration or multiple streams of migration from Siberia. The pattern of dispersals within the Americas is also poorly understood. To address these questions at a higher resolution than was previously possible, we assembled data from 52 Native American and 17 Siberian groups genotyped at 364,470 single nucleotide polymorphisms. Here we show that Native Americans descend from at least three streams of Asian gene flow. Most descend entirely from a single ancestral population that we call 'First American'. However, speakers of Eskimo-Aleut languages from the Arctic inherit almost half their ancestry from a second stream of Asian gene flow, and the Na-Dene-speaking Chipewyan from Canada inherit roughly one-tenth of their ancestry from a third stream. We show that the initial peopling followed a southward expansion facilitated by the coast, with sequential population splits and little gene flow after divergence, especially in South America. A major exception is in Chibchan speakers on both sides of the Panama isthmus, who have ancestry from both North and South America.
author2 Broad Institute of MIT and Harvard (BROAD INSTITUTE)
Harvard Medical School Boston (HMS)-Massachusetts Institute of Technology (MIT)-Massachusetts General Hospital Boston
Department of Genetics Boston
Harvard Medical School Boston (HMS)
Department of Psychiatry and Centre for Genomic Sciences
The University of Hong Kong (HKU)
Dept of Genetics, Evolution and Environment London (UCL-GEE)
University College of London London (UCL)
Anthropologie bio-culturelle, Droit, Ethique et Santé (ADES)
Aix Marseille Université (AMU)-EFS ALPES MEDITERRANEE-Centre National de la Recherche Scientifique (CNRS)
EnviroSPACE Laboratory - Forel Institute
Institute for Environmental Sciences Geneva (ISE)
Université de Genève = University of Geneva (UNIGE)-Université de Genève = University of Geneva (UNIGE)
Laboratorio de Genética Molecular
Universidad de Antioquia = University of Antioquia Medellín, Colombia
Universidad de Antoquia
Grupo Salud y Comunidad
Universidad de Antioquia = University of Antioquia Medellín, Colombia -Facultad de Medicina
Fundacion Salud para el Tropico
Instituto Multidisciplinario de Biología Celular La Plata (IMBICE)
Consejo Nacional de Investigaciones Científicas y Técnicas Buenos Aires (CONICET)-Universidad Nacional de la Plata Argentine (UNLP)-Comisión de Investigaciones Científicas Buenos Aires (CIC)
Servicio de Huellas Digitales Genéticas Buenos Aires
Facultad de Farmacia y Bioquímica Buenos Aires (FFYB)
Universidad de Buenos Aires Buenos Aires (UBA)-Universidad de Buenos Aires Buenos Aires (UBA)
Departamento de Genética
Universidade Federal do Rio Grande do Sul Porto Alegre (UFRGS)-Instituto de Biociencias
Universidade Federal do Parana Curitiba (UFPR)
Universidade Federal do Paraná (UFPR)
Molecular Genetics Laboratory
Escuela Nacional de Antropologia y Historia
Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán - National Institute of Medical Science and Nutrition Salvador Zubiran Mexico
Unit of Molecular Biology and Genomic Medicine
Departamento de Biologìa, Facultad de Quìmica
Universidad Nacional Autónoma de México = National Autonomous University of Mexico (UNAM)
Instituto Mexicano del Seguro Social Mexico City, Mexico (IMSS)
Unidad de Investigacion Medica en Genetica Humana
Hospital de pediatria, Centro Medico Nacional Siglo WXI-IMSS
Escuela Superior de Medicina del Instituto Politecnico Nacional
Escuela Superior de Medicina del Instituto Politecnico Nacional,
Laboratorio de Biologıa de la Reproduccion
Centro de Investigaciones Regionales
Instituto Nacional de Medicina Genomica
Universidad Autonoma de Nuevo Leon Mexique (UANL)
Centro de Investigaciones Biomédicas de Guatemala
Grupo de Medicina Xenómica-Institute of Legal Medicine-CIBERER
Universidade de Santiago de Compostela Spain (USC )
Pathology Department
Hospital Universitari Mútua de Terrassa
Department of Human Genetics
University of Chicago
format Article in Journal/Newspaper
author Reich, David
Patterson, Nick
Campbell, Desmond
Tandon, Arti
Mazières, Stéphane
Ray, Nicolas
Parra, Maria V
Rojas, Winston
Duque, Constanza
Mesa, Natalia
García, Luis F
Triana, Omar
Blair, Silvia
Maestre, Amanda
Dib, Juan C
Bravi, Claudio M
Bailliet, Graciela
Corach, Daniel
Hünemeier, Tábita
Bortolini, Maria Cátira
Salzano, Francisco M
Petzl-Erler, María Luiza
Acuña-Alonzo, Victor
Aguilar-Salinas, Carlos
Canizales-Quinteros, Samuel
Tusié-Luna, Teresa
Riba, Laura
Rodríguez-Cruz, Maricela
Lopez-Alarcón, Mardia
Coral-Vazquez, Ramón
Canto-Cetina, Thelma
Silva-Zolezzi, Irma
Fernandez-Lopez, Juan Carlos
Contreras, Alejandra V
Jimenez-Sanchez, Gerardo
Gómez-Vázquez, Maria José
Molina, Julio
Carracedo, Ángel
Salas, Antonio
Gallo, Carla
Poletti, Giovanni
Witonsky, David B
Alkorta-Aranburu, Gorka
Sukernik, Rem I
Osipova, Ludmila
Fedorova, Sardana A
Vasquez, René
Villena, Mercedes
Moreau, Claudia
Barrantes, Ramiro
author_facet Reich, David
Patterson, Nick
Campbell, Desmond
Tandon, Arti
Mazières, Stéphane
Ray, Nicolas
Parra, Maria V
Rojas, Winston
Duque, Constanza
Mesa, Natalia
García, Luis F
Triana, Omar
Blair, Silvia
Maestre, Amanda
Dib, Juan C
Bravi, Claudio M
Bailliet, Graciela
Corach, Daniel
Hünemeier, Tábita
Bortolini, Maria Cátira
Salzano, Francisco M
Petzl-Erler, María Luiza
Acuña-Alonzo, Victor
Aguilar-Salinas, Carlos
Canizales-Quinteros, Samuel
Tusié-Luna, Teresa
Riba, Laura
Rodríguez-Cruz, Maricela
Lopez-Alarcón, Mardia
Coral-Vazquez, Ramón
Canto-Cetina, Thelma
Silva-Zolezzi, Irma
Fernandez-Lopez, Juan Carlos
Contreras, Alejandra V
Jimenez-Sanchez, Gerardo
Gómez-Vázquez, Maria José
Molina, Julio
Carracedo, Ángel
Salas, Antonio
Gallo, Carla
Poletti, Giovanni
Witonsky, David B
Alkorta-Aranburu, Gorka
Sukernik, Rem I
Osipova, Ludmila
Fedorova, Sardana A
Vasquez, René
Villena, Mercedes
Moreau, Claudia
Barrantes, Ramiro
author_sort Reich, David
title Reconstructing Native American population history.
title_short Reconstructing Native American population history.
title_full Reconstructing Native American population history.
title_fullStr Reconstructing Native American population history.
title_full_unstemmed Reconstructing Native American population history.
title_sort reconstructing native american population history.
publisher HAL CCSD
publishDate 2012
url https://hal.science/hal-00726962
https://hal.science/hal-00726962/document
https://hal.science/hal-00726962/file/Reich_et_al_FullSubmission_2011_08_10709A.pdf
https://doi.org/10.1038/nature11258
geographic Arctic
Canada
geographic_facet Arctic
Canada
genre aleut
Arctic
Chipewyan
eskimo*
Eskimo–Aleut
Siberia
genre_facet aleut
Arctic
Chipewyan
eskimo*
Eskimo–Aleut
Siberia
op_source ISSN: 0028-0836
EISSN: 1476-4687
Nature
https://hal.science/hal-00726962
Nature, 2012, 488 (7411), pp.370-4. ⟨10.1038/nature11258⟩
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doi:10.1038/nature11258
PUBMED: 22801491
op_rights info:eu-repo/semantics/OpenAccess
op_doi https://doi.org/10.1038/nature11258
container_title Nature
container_volume 488
container_issue 7411
container_start_page 370
op_container_end_page 374
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spelling ftunivnantes:oai:HAL:hal-00726962v1 2023-05-15T13:14:29+02:00 Reconstructing Native American population history. Reich, David Patterson, Nick Campbell, Desmond Tandon, Arti Mazières, Stéphane Ray, Nicolas Parra, Maria V Rojas, Winston Duque, Constanza Mesa, Natalia García, Luis F Triana, Omar Blair, Silvia Maestre, Amanda Dib, Juan C Bravi, Claudio M Bailliet, Graciela Corach, Daniel Hünemeier, Tábita Bortolini, Maria Cátira Salzano, Francisco M Petzl-Erler, María Luiza Acuña-Alonzo, Victor Aguilar-Salinas, Carlos Canizales-Quinteros, Samuel Tusié-Luna, Teresa Riba, Laura Rodríguez-Cruz, Maricela Lopez-Alarcón, Mardia Coral-Vazquez, Ramón Canto-Cetina, Thelma Silva-Zolezzi, Irma Fernandez-Lopez, Juan Carlos Contreras, Alejandra V Jimenez-Sanchez, Gerardo Gómez-Vázquez, Maria José Molina, Julio Carracedo, Ángel Salas, Antonio Gallo, Carla Poletti, Giovanni Witonsky, David B Alkorta-Aranburu, Gorka Sukernik, Rem I Osipova, Ludmila Fedorova, Sardana A Vasquez, René Villena, Mercedes Moreau, Claudia Barrantes, Ramiro Broad Institute of MIT and Harvard (BROAD INSTITUTE) Harvard Medical School Boston (HMS)-Massachusetts Institute of Technology (MIT)-Massachusetts General Hospital Boston Department of Genetics Boston Harvard Medical School Boston (HMS) Department of Psychiatry and Centre for Genomic Sciences The University of Hong Kong (HKU) Dept of Genetics, Evolution and Environment London (UCL-GEE) University College of London London (UCL) Anthropologie bio-culturelle, Droit, Ethique et Santé (ADES) Aix Marseille Université (AMU)-EFS ALPES MEDITERRANEE-Centre National de la Recherche Scientifique (CNRS) EnviroSPACE Laboratory - Forel Institute Institute for Environmental Sciences Geneva (ISE) Université de Genève = University of Geneva (UNIGE)-Université de Genève = University of Geneva (UNIGE) Laboratorio de Genética Molecular Universidad de Antioquia = University of Antioquia Medellín, Colombia Universidad de Antoquia Grupo Salud y Comunidad Universidad de Antioquia = University of Antioquia Medellín, Colombia -Facultad de Medicina Fundacion Salud para el Tropico Instituto Multidisciplinario de Biología Celular La Plata (IMBICE) Consejo Nacional de Investigaciones Científicas y Técnicas Buenos Aires (CONICET)-Universidad Nacional de la Plata Argentine (UNLP)-Comisión de Investigaciones Científicas Buenos Aires (CIC) Servicio de Huellas Digitales Genéticas Buenos Aires Facultad de Farmacia y Bioquímica Buenos Aires (FFYB) Universidad de Buenos Aires Buenos Aires (UBA)-Universidad de Buenos Aires Buenos Aires (UBA) Departamento de Genética Universidade Federal do Rio Grande do Sul Porto Alegre (UFRGS)-Instituto de Biociencias Universidade Federal do Parana Curitiba (UFPR) Universidade Federal do Paraná (UFPR) Molecular Genetics Laboratory Escuela Nacional de Antropologia y Historia Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán - National Institute of Medical Science and Nutrition Salvador Zubiran Mexico Unit of Molecular Biology and Genomic Medicine Departamento de Biologìa, Facultad de Quìmica Universidad Nacional Autónoma de México = National Autonomous University of Mexico (UNAM) Instituto Mexicano del Seguro Social Mexico City, Mexico (IMSS) Unidad de Investigacion Medica en Genetica Humana Hospital de pediatria, Centro Medico Nacional Siglo WXI-IMSS Escuela Superior de Medicina del Instituto Politecnico Nacional Escuela Superior de Medicina del Instituto Politecnico Nacional, Laboratorio de Biologıa de la Reproduccion Centro de Investigaciones Regionales Instituto Nacional de Medicina Genomica Universidad Autonoma de Nuevo Leon Mexique (UANL) Centro de Investigaciones Biomédicas de Guatemala Grupo de Medicina Xenómica-Institute of Legal Medicine-CIBERER Universidade de Santiago de Compostela Spain (USC ) Pathology Department Hospital Universitari Mútua de Terrassa Department of Human Genetics University of Chicago 2012-08-16 https://hal.science/hal-00726962 https://hal.science/hal-00726962/document https://hal.science/hal-00726962/file/Reich_et_al_FullSubmission_2011_08_10709A.pdf https://doi.org/10.1038/nature11258 en eng HAL CCSD Nature Publishing Group info:eu-repo/semantics/altIdentifier/doi/10.1038/nature11258 info:eu-repo/semantics/altIdentifier/pmid/22801491 hal-00726962 https://hal.science/hal-00726962 https://hal.science/hal-00726962/document https://hal.science/hal-00726962/file/Reich_et_al_FullSubmission_2011_08_10709A.pdf doi:10.1038/nature11258 PUBMED: 22801491 info:eu-repo/semantics/OpenAccess ISSN: 0028-0836 EISSN: 1476-4687 Nature https://hal.science/hal-00726962 Nature, 2012, 488 (7411), pp.370-4. ⟨10.1038/nature11258⟩ [SHS.ANTHRO-BIO]Humanities and Social Sciences/Biological anthropology [SDV.GEN.GH]Life Sciences [q-bio]/Genetics/Human genetics info:eu-repo/semantics/article Journal articles 2012 ftunivnantes https://doi.org/10.1038/nature11258 2023-02-22T00:09:42Z International audience The peopling of the Americas has been the subject of extensive genetic, archaeological and linguistic research; however, central questions remain unresolved. One contentious issue is whether the settlement occurred by means of a single migration or multiple streams of migration from Siberia. The pattern of dispersals within the Americas is also poorly understood. To address these questions at a higher resolution than was previously possible, we assembled data from 52 Native American and 17 Siberian groups genotyped at 364,470 single nucleotide polymorphisms. Here we show that Native Americans descend from at least three streams of Asian gene flow. Most descend entirely from a single ancestral population that we call 'First American'. However, speakers of Eskimo-Aleut languages from the Arctic inherit almost half their ancestry from a second stream of Asian gene flow, and the Na-Dene-speaking Chipewyan from Canada inherit roughly one-tenth of their ancestry from a third stream. We show that the initial peopling followed a southward expansion facilitated by the coast, with sequential population splits and little gene flow after divergence, especially in South America. A major exception is in Chibchan speakers on both sides of the Panama isthmus, who have ancestry from both North and South America. Article in Journal/Newspaper aleut Arctic Chipewyan eskimo* Eskimo–Aleut Siberia Université de Nantes: HAL-UNIV-NANTES Arctic Canada Nature 488 7411 370 374