The enigmatic invasive Spartina densiflora: A history of hybridizations in a polyploidy context

International audience The aim of this study was to explore the origin of the invasive Spartina densiflora by analysing samples from the native region (South America) and from a recently colonized area (California). A combination of various molecular data (chloroplast and nuclear sequences, molecula...

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Published in:Molecular Ecology
Main Authors: Fortune, Philippe, Schierenbeck, Kristina, Ayres, D.R., Bortolus, Alejandro, Catrice, Olivier, Brown, Spencer, Aïnouche, Malika L.
Other Authors: Ecosystèmes, biodiversité, évolution Rennes (ECOBIO), Université de Rennes 1 (UR1), Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Institut Ecologie et Environnement (INEE), Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Observatoire des Sciences de l'Univers de Rennes (OSUR), Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2), Université de Rennes (UNIV-RENNES)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2), Université de Rennes (UNIV-RENNES)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Centre National de la Recherche Scientifique (CNRS), Laboratoire Génome et développement des plantes (LGDP), Université de Perpignan Via Domitia (UPVD)-Centre National de la Recherche Scientifique (CNRS), Department of Biological Sciences Chico, California State University Chico, Department of Evolution and Ecology Univ California Davis (EVE - UC Davis), University of California Davis (UC Davis), University of California (UC)-University of California (UC), Grupo de Ecologia en Ambientes Costeros (GEAC), Centro Nacional Patagónico (CENPAT), Institut des sciences du végétal (ISV), Centre National de la Recherche Scientifique (CNRS), Bourse CNRS-NSF, Intrabiodiv Consortium, ANR-05-BDIV-0015,Polyploidie,Effet de la polyploïdie sur la biodiversité et l'évolution du génome des plantes (BioPPG)(2005)
Format: Article in Journal/Newspaper
Language:English
Published: HAL CCSD 2008
Subjects:
Online Access:https://hal.science/hal-00335994
https://doi.org/10.1111/j.1365-294X.2008.03916.x
id ftunivnantes:oai:HAL:hal-00335994v1
record_format openpolar
institution Open Polar
collection Université de Nantes: HAL-UNIV-NANTES
op_collection_id ftunivnantes
language English
topic allopolyploidy
hybridization
reticulate evolution
Spartina densiflora
MESH: California
MESH: Consensus Sequence
MESH: Gene Amplification
MESH: Nucleic Acid Hybridization
MESH: Phylogeny
MESH: Poaceae
MESH: Polyploidy
MESH: South America
MESH: DNA Fingerprinting
MESH: DNA
Chloroplast
Plant
MESH: Ecosystem
[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]
[SDE.BE]Environmental Sciences/Biodiversity and Ecology
[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanics
spellingShingle allopolyploidy
hybridization
reticulate evolution
Spartina densiflora
MESH: California
MESH: Consensus Sequence
MESH: Gene Amplification
MESH: Nucleic Acid Hybridization
MESH: Phylogeny
MESH: Poaceae
MESH: Polyploidy
MESH: South America
MESH: DNA Fingerprinting
MESH: DNA
Chloroplast
Plant
MESH: Ecosystem
[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]
[SDE.BE]Environmental Sciences/Biodiversity and Ecology
[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanics
Fortune, Philippe
Schierenbeck, Kristina,
Ayres, D.R.
Bortolus, Alejandro
Catrice, Olivier
Brown, Spencer
Aïnouche, Malika L.
The enigmatic invasive Spartina densiflora: A history of hybridizations in a polyploidy context
topic_facet allopolyploidy
hybridization
reticulate evolution
Spartina densiflora
MESH: California
MESH: Consensus Sequence
MESH: Gene Amplification
MESH: Nucleic Acid Hybridization
MESH: Phylogeny
MESH: Poaceae
MESH: Polyploidy
MESH: South America
MESH: DNA Fingerprinting
MESH: DNA
Chloroplast
Plant
MESH: Ecosystem
[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]
[SDE.BE]Environmental Sciences/Biodiversity and Ecology
[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanics
description International audience The aim of this study was to explore the origin of the invasive Spartina densiflora by analysing samples from the native region (South America) and from a recently colonized area (California). A combination of various molecular data (chloroplast and nuclear sequences, molecular fingerprint) and ploidy level estimations was used to answer the question whether the reticulate phylogenetic pattern previously detected in S. densiflora was restricted to California, or alternatively, whether a more ancient hybrid origin preceded formation of this species in its native area. We found that this species is heptaploid in both its native and introduced range. Identification of nuclear homeologous sequences indicate that this species has a reticulate origin in its native range, involving a lineage related to the hexaploid clade formed by S. alterniflora, S. foliosa, and S. maritima, and another lineage related to the sub-Antarctic endemic S. arundinacea that provided the chloroplast genome. The samples from California displayed similar multilocus patterns to the samples from Chile, supporting the hypothesis that this species originated on the southeast American coast (Argentina), from where it eventually spread to the west coast of South America (Chile) first and to the Northern Hemisphere (California) later.
author2 Ecosystèmes, biodiversité, évolution Rennes (ECOBIO)
Université de Rennes 1 (UR1)
Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Institut Ecologie et Environnement (INEE)
Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Observatoire des Sciences de l'Univers de Rennes (OSUR)
Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2)
Université de Rennes (UNIV-RENNES)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2)
Université de Rennes (UNIV-RENNES)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Centre National de la Recherche Scientifique (CNRS)
Laboratoire Génome et développement des plantes (LGDP)
Université de Perpignan Via Domitia (UPVD)-Centre National de la Recherche Scientifique (CNRS)
Department of Biological Sciences Chico
California State University Chico
Department of Evolution and Ecology Univ California Davis (EVE - UC Davis)
University of California Davis (UC Davis)
University of California (UC)-University of California (UC)
Grupo de Ecologia en Ambientes Costeros (GEAC)
Centro Nacional Patagónico (CENPAT)
Institut des sciences du végétal (ISV)
Centre National de la Recherche Scientifique (CNRS)
Bourse CNRS-NSF
Intrabiodiv Consortium
ANR-05-BDIV-0015,Polyploidie,Effet de la polyploïdie sur la biodiversité et l'évolution du génome des plantes (BioPPG)(2005)
format Article in Journal/Newspaper
author Fortune, Philippe
Schierenbeck, Kristina,
Ayres, D.R.
Bortolus, Alejandro
Catrice, Olivier
Brown, Spencer
Aïnouche, Malika L.
author_facet Fortune, Philippe
Schierenbeck, Kristina,
Ayres, D.R.
Bortolus, Alejandro
Catrice, Olivier
Brown, Spencer
Aïnouche, Malika L.
author_sort Fortune, Philippe
title The enigmatic invasive Spartina densiflora: A history of hybridizations in a polyploidy context
title_short The enigmatic invasive Spartina densiflora: A history of hybridizations in a polyploidy context
title_full The enigmatic invasive Spartina densiflora: A history of hybridizations in a polyploidy context
title_fullStr The enigmatic invasive Spartina densiflora: A history of hybridizations in a polyploidy context
title_full_unstemmed The enigmatic invasive Spartina densiflora: A history of hybridizations in a polyploidy context
title_sort enigmatic invasive spartina densiflora: a history of hybridizations in a polyploidy context
publisher HAL CCSD
publishDate 2008
url https://hal.science/hal-00335994
https://doi.org/10.1111/j.1365-294X.2008.03916.x
geographic Antarctic
Argentina
geographic_facet Antarctic
Argentina
genre Antarc*
Antarctic
genre_facet Antarc*
Antarctic
op_source ISSN: 0962-1083
EISSN: 1365-294X
Molecular Ecology
https://hal.science/hal-00335994
Molecular Ecology, 2008, 17 (19), pp.4304-4316. ⟨10.1111/j.1365-294X.2008.03916.x⟩
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https://hal.science/hal-00335994
doi:10.1111/j.1365-294X.2008.03916.x
PUBMED: 18986503
op_doi https://doi.org/10.1111/j.1365-294X.2008.03916.x
container_title Molecular Ecology
container_volume 17
container_issue 19
container_start_page 4304
op_container_end_page 4316
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spelling ftunivnantes:oai:HAL:hal-00335994v1 2023-05-15T13:35:24+02:00 The enigmatic invasive Spartina densiflora: A history of hybridizations in a polyploidy context Fortune, Philippe Schierenbeck, Kristina, Ayres, D.R. Bortolus, Alejandro Catrice, Olivier Brown, Spencer Aïnouche, Malika L. Ecosystèmes, biodiversité, évolution Rennes (ECOBIO) Université de Rennes 1 (UR1) Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Institut Ecologie et Environnement (INEE) Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Observatoire des Sciences de l'Univers de Rennes (OSUR) Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2) Université de Rennes (UNIV-RENNES)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2) Université de Rennes (UNIV-RENNES)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Centre National de la Recherche Scientifique (CNRS) Laboratoire Génome et développement des plantes (LGDP) Université de Perpignan Via Domitia (UPVD)-Centre National de la Recherche Scientifique (CNRS) Department of Biological Sciences Chico California State University Chico Department of Evolution and Ecology Univ California Davis (EVE - UC Davis) University of California Davis (UC Davis) University of California (UC)-University of California (UC) Grupo de Ecologia en Ambientes Costeros (GEAC) Centro Nacional Patagónico (CENPAT) Institut des sciences du végétal (ISV) Centre National de la Recherche Scientifique (CNRS) Bourse CNRS-NSF Intrabiodiv Consortium ANR-05-BDIV-0015,Polyploidie,Effet de la polyploïdie sur la biodiversité et l'évolution du génome des plantes (BioPPG)(2005) 2008 https://hal.science/hal-00335994 https://doi.org/10.1111/j.1365-294X.2008.03916.x en eng HAL CCSD Wiley info:eu-repo/semantics/altIdentifier/doi/10.1111/j.1365-294X.2008.03916.x info:eu-repo/semantics/altIdentifier/pmid/18986503 hal-00335994 https://hal.science/hal-00335994 doi:10.1111/j.1365-294X.2008.03916.x PUBMED: 18986503 ISSN: 0962-1083 EISSN: 1365-294X Molecular Ecology https://hal.science/hal-00335994 Molecular Ecology, 2008, 17 (19), pp.4304-4316. ⟨10.1111/j.1365-294X.2008.03916.x⟩ allopolyploidy hybridization reticulate evolution Spartina densiflora MESH: California MESH: Consensus Sequence MESH: Gene Amplification MESH: Nucleic Acid Hybridization MESH: Phylogeny MESH: Poaceae MESH: Polyploidy MESH: South America MESH: DNA Fingerprinting MESH: DNA Chloroplast Plant MESH: Ecosystem [SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE] [SDE.BE]Environmental Sciences/Biodiversity and Ecology [SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanics info:eu-repo/semantics/article Journal articles 2008 ftunivnantes https://doi.org/10.1111/j.1365-294X.2008.03916.x 2023-02-08T04:04:05Z International audience The aim of this study was to explore the origin of the invasive Spartina densiflora by analysing samples from the native region (South America) and from a recently colonized area (California). A combination of various molecular data (chloroplast and nuclear sequences, molecular fingerprint) and ploidy level estimations was used to answer the question whether the reticulate phylogenetic pattern previously detected in S. densiflora was restricted to California, or alternatively, whether a more ancient hybrid origin preceded formation of this species in its native area. We found that this species is heptaploid in both its native and introduced range. Identification of nuclear homeologous sequences indicate that this species has a reticulate origin in its native range, involving a lineage related to the hexaploid clade formed by S. alterniflora, S. foliosa, and S. maritima, and another lineage related to the sub-Antarctic endemic S. arundinacea that provided the chloroplast genome. The samples from California displayed similar multilocus patterns to the samples from Chile, supporting the hypothesis that this species originated on the southeast American coast (Argentina), from where it eventually spread to the west coast of South America (Chile) first and to the Northern Hemisphere (California) later. Article in Journal/Newspaper Antarc* Antarctic Université de Nantes: HAL-UNIV-NANTES Antarctic Argentina Molecular Ecology 17 19 4304 4316