Interpolation of animal tracking data in a fluid environment
International audience Interpolation of geolocation or Argos tracking data is a necessity for habitat use analyses of marine vertebrates. In a fluid marine environment, characterized by curvilinear structures, linearly interpolated track data are not realistic. Based on these two facts, we interpola...
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ftunivnantes:oai:HAL:hal-00184417v1 2023-05-15T16:05:24+02:00 Interpolation of animal tracking data in a fluid environment Tremblay, Yann Shaffer, Scott A. Fowler, Shannon L. Kuhn, Carey E. Mc Donald, Brigitte I. Weise, Michael J. Bost, Charles - André Weimerskirch, Henri Crocker, Daniel E. Goebel, Michael E. Costa, Daniel P. Department of Ecology and Evolutionary Biology University of California Santa Cruz (UC Santa Cruz) University of California (UC)-University of California (UC) Centre d'Études Biologiques de Chizé (CEBC) Centre National de la Recherche Scientifique (CNRS) Department of Biology Sonoma State University Rohnert Park Southwest Fisheries Science Center (SWFSC) NOAA National Marine Fisheries Service (NMFS) National Oceanic and Atmospheric Administration (NOAA)-National Oceanic and Atmospheric Administration (NOAA) 2006-01 https://hal.science/hal-00184417 en eng HAL CCSD The Company of Biologists hal-00184417 https://hal.science/hal-00184417 ISSN: 0022-0949 EISSN: 1477-9145 Journal of Experimental Biology https://hal.science/hal-00184417 Journal of Experimental Biology, 2006, 209, pp.128-140 tracking telemetry Argos geolocation GPS Bézier cubic hermite spline albatross penguin sea lion fur seal elephant seal booby seabird marine mammal [SDE.BE]Environmental Sciences/Biodiversity and Ecology [SDE.ES]Environmental Sciences/Environmental and Society [SDE.MCG]Environmental Sciences/Global Changes info:eu-repo/semantics/article Journal articles 2006 ftunivnantes 2023-02-08T08:28:43Z International audience Interpolation of geolocation or Argos tracking data is a necessity for habitat use analyses of marine vertebrates. In a fluid marine environment, characterized by curvilinear structures, linearly interpolated track data are not realistic. Based on these two facts, we interpolated tracking data from albatrosses, penguins, boobies, sea lions, fur seals and elephant seals using six mathematical algorithms. Given their popularity in mathematical computing, we chose Bézier, hermite and cubic splines, in addition to a commonly used linear algorithm to interpolate data. Performance of interpolation methods was compared with different temporal resolutions representative of the less-precise geolocation and the more-precise Argos tracking techniques. Parameters from interpolated sub-sampled tracks were compared with those obtained from intact tracks. Average accuracy of the interpolated location was not affected by the interpolation method and was always within the precision of the tracking technique used. However, depending on the species tested, some curvilinear interpolation algorithms produced greater occurrences of more accurate locations, compared with the linear interpolation method. Total track lengths were consistently underestimated but were always more accurate using curvilinear interpolation than linear interpolation. Curvilinear algorithms are safe to use because accuracy, shape and length of the tracks are either not different or are slightly enhanced and because analyses always remain conservative. The choice of the curvilinear algorithm does not affect the resulting track dramatically so it should not preclude their use. We thus recommend using curvilinear interpolation techniques because of the more realistic fluid movements of animals. We also provide some guidelines for choosing an algorithm that is most likely to maximize track quality for different types of marine vertebrates. Article in Journal/Newspaper Elephant Seal Elephant Seals Université de Nantes: HAL-UNIV-NANTES |
institution |
Open Polar |
collection |
Université de Nantes: HAL-UNIV-NANTES |
op_collection_id |
ftunivnantes |
language |
English |
topic |
tracking telemetry Argos geolocation GPS Bézier cubic hermite spline albatross penguin sea lion fur seal elephant seal booby seabird marine mammal [SDE.BE]Environmental Sciences/Biodiversity and Ecology [SDE.ES]Environmental Sciences/Environmental and Society [SDE.MCG]Environmental Sciences/Global Changes |
spellingShingle |
tracking telemetry Argos geolocation GPS Bézier cubic hermite spline albatross penguin sea lion fur seal elephant seal booby seabird marine mammal [SDE.BE]Environmental Sciences/Biodiversity and Ecology [SDE.ES]Environmental Sciences/Environmental and Society [SDE.MCG]Environmental Sciences/Global Changes Tremblay, Yann Shaffer, Scott A. Fowler, Shannon L. Kuhn, Carey E. Mc Donald, Brigitte I. Weise, Michael J. Bost, Charles - André Weimerskirch, Henri Crocker, Daniel E. Goebel, Michael E. Costa, Daniel P. Interpolation of animal tracking data in a fluid environment |
topic_facet |
tracking telemetry Argos geolocation GPS Bézier cubic hermite spline albatross penguin sea lion fur seal elephant seal booby seabird marine mammal [SDE.BE]Environmental Sciences/Biodiversity and Ecology [SDE.ES]Environmental Sciences/Environmental and Society [SDE.MCG]Environmental Sciences/Global Changes |
description |
International audience Interpolation of geolocation or Argos tracking data is a necessity for habitat use analyses of marine vertebrates. In a fluid marine environment, characterized by curvilinear structures, linearly interpolated track data are not realistic. Based on these two facts, we interpolated tracking data from albatrosses, penguins, boobies, sea lions, fur seals and elephant seals using six mathematical algorithms. Given their popularity in mathematical computing, we chose Bézier, hermite and cubic splines, in addition to a commonly used linear algorithm to interpolate data. Performance of interpolation methods was compared with different temporal resolutions representative of the less-precise geolocation and the more-precise Argos tracking techniques. Parameters from interpolated sub-sampled tracks were compared with those obtained from intact tracks. Average accuracy of the interpolated location was not affected by the interpolation method and was always within the precision of the tracking technique used. However, depending on the species tested, some curvilinear interpolation algorithms produced greater occurrences of more accurate locations, compared with the linear interpolation method. Total track lengths were consistently underestimated but were always more accurate using curvilinear interpolation than linear interpolation. Curvilinear algorithms are safe to use because accuracy, shape and length of the tracks are either not different or are slightly enhanced and because analyses always remain conservative. The choice of the curvilinear algorithm does not affect the resulting track dramatically so it should not preclude their use. We thus recommend using curvilinear interpolation techniques because of the more realistic fluid movements of animals. We also provide some guidelines for choosing an algorithm that is most likely to maximize track quality for different types of marine vertebrates. |
author2 |
Department of Ecology and Evolutionary Biology University of California Santa Cruz (UC Santa Cruz) University of California (UC)-University of California (UC) Centre d'Études Biologiques de Chizé (CEBC) Centre National de la Recherche Scientifique (CNRS) Department of Biology Sonoma State University Rohnert Park Southwest Fisheries Science Center (SWFSC) NOAA National Marine Fisheries Service (NMFS) National Oceanic and Atmospheric Administration (NOAA)-National Oceanic and Atmospheric Administration (NOAA) |
format |
Article in Journal/Newspaper |
author |
Tremblay, Yann Shaffer, Scott A. Fowler, Shannon L. Kuhn, Carey E. Mc Donald, Brigitte I. Weise, Michael J. Bost, Charles - André Weimerskirch, Henri Crocker, Daniel E. Goebel, Michael E. Costa, Daniel P. |
author_facet |
Tremblay, Yann Shaffer, Scott A. Fowler, Shannon L. Kuhn, Carey E. Mc Donald, Brigitte I. Weise, Michael J. Bost, Charles - André Weimerskirch, Henri Crocker, Daniel E. Goebel, Michael E. Costa, Daniel P. |
author_sort |
Tremblay, Yann |
title |
Interpolation of animal tracking data in a fluid environment |
title_short |
Interpolation of animal tracking data in a fluid environment |
title_full |
Interpolation of animal tracking data in a fluid environment |
title_fullStr |
Interpolation of animal tracking data in a fluid environment |
title_full_unstemmed |
Interpolation of animal tracking data in a fluid environment |
title_sort |
interpolation of animal tracking data in a fluid environment |
publisher |
HAL CCSD |
publishDate |
2006 |
url |
https://hal.science/hal-00184417 |
genre |
Elephant Seal Elephant Seals |
genre_facet |
Elephant Seal Elephant Seals |
op_source |
ISSN: 0022-0949 EISSN: 1477-9145 Journal of Experimental Biology https://hal.science/hal-00184417 Journal of Experimental Biology, 2006, 209, pp.128-140 |
op_relation |
hal-00184417 https://hal.science/hal-00184417 |
_version_ |
1766401291352801280 |