The co-existence of cold activity and thermal stability in an Antarctic GH42 β-galactosidase relies on its hexameric quaternary arrangement
To survive in cold environments, psychrophilic organisms produce enzymes endowed with high specific activity at low temperature. The structure of these enzymes is usually flexible and mostly thermolabile. In this work, we investigate the structural basis of cold adaptation of a GH42 β-galactosidase...
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2021
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Online Access: | http://hdl.handle.net/10281/276684 https://doi.org/10.1111/febs.15354 |
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ftunivmilanobic:oai:boa.unimib.it:10281/276684 2024-04-14T08:04:14+00:00 The co-existence of cold activity and thermal stability in an Antarctic GH42 β-galactosidase relies on its hexameric quaternary arrangement Mangiagalli, Marco Lapi, Michela Maione, Serena Orlando, Marco Brocca, Stefania Pesce, Alessandra Barbiroli, Alberto Camilloni, Carlo Pucciarelli, Sandra Lotti, Marina Nardini, Marco Mangiagalli, M Lapi, M Maione, S Orlando, M Brocca, S Pesce, A Barbiroli, A Camilloni, C Pucciarelli, S Lotti, M Nardini, M 2021 http://hdl.handle.net/10281/276684 https://doi.org/10.1111/febs.15354 eng eng Blackwell Publishing Ltd info:eu-repo/semantics/altIdentifier/pmid/32363751 info:eu-repo/semantics/altIdentifier/wos/WOS:000537698000001 volume:288 issue:2 firstpage:546 lastpage:565 numberofpages:20 journal:THE FEBS JOURNAL http://hdl.handle.net/10281/276684 doi:10.1111/febs.15354 info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-85085919958 info:eu-repo/semantics/closedAccess cold adaptation cooperativity enzyme kinetic glycoside hydrolase psychrophilic enzyme info:eu-repo/semantics/article 2021 ftunivmilanobic https://doi.org/10.1111/febs.15354 2024-03-21T17:14:40Z To survive in cold environments, psychrophilic organisms produce enzymes endowed with high specific activity at low temperature. The structure of these enzymes is usually flexible and mostly thermolabile. In this work, we investigate the structural basis of cold adaptation of a GH42 β-galactosidase from the psychrophilic Marinomonas ef1. This enzyme couples cold activity with astonishing robustness for a psychrophilic protein, for it retains 23% of its highest activity at 5°C and it is stable for several days at 37°C and even 50°C. Phylogenetic analyses indicate a close relationship with thermophilic β-galactosidases, suggesting that the present-day enzyme evolved from a thermostable scaffold modeled by environmental selective pressure. The crystallographic structure reveals the overall similarity with GH42 enzymes, along with a hexameric arrangement (dimer of trimers) not found in psychrophilic, mesophilic, and thermophilic homologues. In the quaternary structure, protomers form a large central cavity, whose accessibility to the substrate is promoted by the dynamic behavior of surface loops, even at low temperature. A peculiar cooperative behavior of the enzyme is likely related to the increase of the internal cavity permeability triggered by heating. Overall, our results highlight a novel strategy of enzyme cold adaptation, based on the oligomerization state of the enzyme, which effectively challenges the paradigm of cold activity coupled with intrinsic thermolability. DATABASE: Structural data are available in the Protein Data Bank database under the accession number 6Y2K. Article in Journal/Newspaper Antarc* Antarctic Università degli Studi di Milano-Bicocca: BOA (Bicocca Open Archive) Antarctic The FEBS Journal 288 2 546 565 |
institution |
Open Polar |
collection |
Università degli Studi di Milano-Bicocca: BOA (Bicocca Open Archive) |
op_collection_id |
ftunivmilanobic |
language |
English |
topic |
cold adaptation cooperativity enzyme kinetic glycoside hydrolase psychrophilic enzyme |
spellingShingle |
cold adaptation cooperativity enzyme kinetic glycoside hydrolase psychrophilic enzyme Mangiagalli, Marco Lapi, Michela Maione, Serena Orlando, Marco Brocca, Stefania Pesce, Alessandra Barbiroli, Alberto Camilloni, Carlo Pucciarelli, Sandra Lotti, Marina Nardini, Marco The co-existence of cold activity and thermal stability in an Antarctic GH42 β-galactosidase relies on its hexameric quaternary arrangement |
topic_facet |
cold adaptation cooperativity enzyme kinetic glycoside hydrolase psychrophilic enzyme |
description |
To survive in cold environments, psychrophilic organisms produce enzymes endowed with high specific activity at low temperature. The structure of these enzymes is usually flexible and mostly thermolabile. In this work, we investigate the structural basis of cold adaptation of a GH42 β-galactosidase from the psychrophilic Marinomonas ef1. This enzyme couples cold activity with astonishing robustness for a psychrophilic protein, for it retains 23% of its highest activity at 5°C and it is stable for several days at 37°C and even 50°C. Phylogenetic analyses indicate a close relationship with thermophilic β-galactosidases, suggesting that the present-day enzyme evolved from a thermostable scaffold modeled by environmental selective pressure. The crystallographic structure reveals the overall similarity with GH42 enzymes, along with a hexameric arrangement (dimer of trimers) not found in psychrophilic, mesophilic, and thermophilic homologues. In the quaternary structure, protomers form a large central cavity, whose accessibility to the substrate is promoted by the dynamic behavior of surface loops, even at low temperature. A peculiar cooperative behavior of the enzyme is likely related to the increase of the internal cavity permeability triggered by heating. Overall, our results highlight a novel strategy of enzyme cold adaptation, based on the oligomerization state of the enzyme, which effectively challenges the paradigm of cold activity coupled with intrinsic thermolability. DATABASE: Structural data are available in the Protein Data Bank database under the accession number 6Y2K. |
author2 |
Mangiagalli, M Lapi, M Maione, S Orlando, M Brocca, S Pesce, A Barbiroli, A Camilloni, C Pucciarelli, S Lotti, M Nardini, M |
format |
Article in Journal/Newspaper |
author |
Mangiagalli, Marco Lapi, Michela Maione, Serena Orlando, Marco Brocca, Stefania Pesce, Alessandra Barbiroli, Alberto Camilloni, Carlo Pucciarelli, Sandra Lotti, Marina Nardini, Marco |
author_facet |
Mangiagalli, Marco Lapi, Michela Maione, Serena Orlando, Marco Brocca, Stefania Pesce, Alessandra Barbiroli, Alberto Camilloni, Carlo Pucciarelli, Sandra Lotti, Marina Nardini, Marco |
author_sort |
Mangiagalli, Marco |
title |
The co-existence of cold activity and thermal stability in an Antarctic GH42 β-galactosidase relies on its hexameric quaternary arrangement |
title_short |
The co-existence of cold activity and thermal stability in an Antarctic GH42 β-galactosidase relies on its hexameric quaternary arrangement |
title_full |
The co-existence of cold activity and thermal stability in an Antarctic GH42 β-galactosidase relies on its hexameric quaternary arrangement |
title_fullStr |
The co-existence of cold activity and thermal stability in an Antarctic GH42 β-galactosidase relies on its hexameric quaternary arrangement |
title_full_unstemmed |
The co-existence of cold activity and thermal stability in an Antarctic GH42 β-galactosidase relies on its hexameric quaternary arrangement |
title_sort |
co-existence of cold activity and thermal stability in an antarctic gh42 β-galactosidase relies on its hexameric quaternary arrangement |
publisher |
Blackwell Publishing Ltd |
publishDate |
2021 |
url |
http://hdl.handle.net/10281/276684 https://doi.org/10.1111/febs.15354 |
geographic |
Antarctic |
geographic_facet |
Antarctic |
genre |
Antarc* Antarctic |
genre_facet |
Antarc* Antarctic |
op_relation |
info:eu-repo/semantics/altIdentifier/pmid/32363751 info:eu-repo/semantics/altIdentifier/wos/WOS:000537698000001 volume:288 issue:2 firstpage:546 lastpage:565 numberofpages:20 journal:THE FEBS JOURNAL http://hdl.handle.net/10281/276684 doi:10.1111/febs.15354 info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-85085919958 |
op_rights |
info:eu-repo/semantics/closedAccess |
op_doi |
https://doi.org/10.1111/febs.15354 |
container_title |
The FEBS Journal |
container_volume |
288 |
container_issue |
2 |
container_start_page |
546 |
op_container_end_page |
565 |
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1796300658839650304 |