The co-existence of cold activity and thermal stability in an Antarctic GH42 β-galactosidase relies on its hexameric quaternary arrangement
To survive in cold environments, psychrophilic organisms produce enzymes endowed with high specific activity at low temperature. The structure of these enzymes is usually flexible and mostly thermolabile. In this work, we investigate the structural basis of cold adaptation of a GH42 beta-galactosida...
Published in: | The FEBS Journal |
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Main Authors: | , , , , , , , , , , |
Other Authors: | , , , , , , , , , , |
Format: | Article in Journal/Newspaper |
Language: | English |
Published: |
2020
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Subjects: | |
Online Access: | http://hdl.handle.net/2434/738623 https://doi.org/10.1111/febs.15354 |
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author | Mangiagalli, Marco Lapi, Michela Maione, Serena Orlando, Marco Brocca, Stefania Pesce, Alessandra Barbiroli, Alberto Camilloni, Carlo Pucciarelli, Sandra Lotti, Marina Nardini, Marco |
author2 | M. Mangiagalli M. Lapi S. Maione M. Orlando S. Brocca A. Pesce A. Barbiroli C. Camilloni S. Pucciarelli M. Lotti M. Nardini |
author_facet | Mangiagalli, Marco Lapi, Michela Maione, Serena Orlando, Marco Brocca, Stefania Pesce, Alessandra Barbiroli, Alberto Camilloni, Carlo Pucciarelli, Sandra Lotti, Marina Nardini, Marco |
author_sort | Mangiagalli, Marco |
collection | The University of Milan: Archivio Istituzionale della Ricerca (AIR) |
container_issue | 2 |
container_start_page | 546 |
container_title | The FEBS Journal |
container_volume | 288 |
description | To survive in cold environments, psychrophilic organisms produce enzymes endowed with high specific activity at low temperature. The structure of these enzymes is usually flexible and mostly thermolabile. In this work, we investigate the structural basis of cold adaptation of a GH42 beta-galactosidase from the psychrophilic Marinomonas ef1. This enzyme couples cold activity with astonishing robustness for a psychrophilic protein, for it retains 23% of its highest activity at 5 degrees C and it is stable for several days at 37 degrees C and even 50 degrees C. Phylogenetic analyses indicate a close relationship with thermophilic beta-galactosidases, suggesting that the present-day enzyme evolved from a thermostable scaffold modeled by environmental selective pressure. The crystallographic structure reveals the overall similarity with GH42 enzymes, along with a hexameric arrangement (dimer of trimers) not found in psychrophilic, mesophilic, and thermophilic homologues. In the quaternary structure, protomers form a large central cavity, whose accessibility to the substrate is promoted by the dynamic behavior of surface loops, even at low temperature. A peculiar cooperative behavior of the enzyme is likely related to the increase of the internal cavity permeability triggered by heating. Overall, our results highlight a novel strategy of enzyme cold adaptation, based on the oligomerization state of the enzyme, which effectively challenges the paradigm of cold activity coupled with intrinsic thermolability. |
format | Article in Journal/Newspaper |
genre | Antarc* Antarctic |
genre_facet | Antarc* Antarctic |
geographic | Antarctic |
geographic_facet | Antarctic |
id | ftunivmilanoair:oai:air.unimi.it:2434/738623 |
institution | Open Polar |
language | English |
op_collection_id | ftunivmilanoair |
op_container_end_page | 565 |
op_doi | https://doi.org/10.1111/febs.15354 |
op_relation | info:eu-repo/semantics/altIdentifier/pmid/32363751 info:eu-repo/semantics/altIdentifier/wos/WOS:000537698000001 journal:THE FEBS JOURNAL http://hdl.handle.net/2434/738623 doi:10.1111/febs.15354 info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-85085919958 |
op_rights | info:eu-repo/semantics/closedAccess |
publishDate | 2020 |
record_format | openpolar |
spelling | ftunivmilanoair:oai:air.unimi.it:2434/738623 2025-01-16T19:33:01+00:00 The co-existence of cold activity and thermal stability in an Antarctic GH42 β-galactosidase relies on its hexameric quaternary arrangement Mangiagalli, Marco Lapi, Michela Maione, Serena Orlando, Marco Brocca, Stefania Pesce, Alessandra Barbiroli, Alberto Camilloni, Carlo Pucciarelli, Sandra Lotti, Marina Nardini, Marco M. Mangiagalli M. Lapi S. Maione M. Orlando S. Brocca A. Pesce A. Barbiroli C. Camilloni S. Pucciarelli M. Lotti M. Nardini 2020 http://hdl.handle.net/2434/738623 https://doi.org/10.1111/febs.15354 eng eng info:eu-repo/semantics/altIdentifier/pmid/32363751 info:eu-repo/semantics/altIdentifier/wos/WOS:000537698000001 journal:THE FEBS JOURNAL http://hdl.handle.net/2434/738623 doi:10.1111/febs.15354 info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-85085919958 info:eu-repo/semantics/closedAccess cold adaptation cooperativity enzyme kinetic glycoside hydrolase psychrophilic enzyme Settore BIO/10 - Biochimica Settore BIO/17 - Istologia Settore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin) info:eu-repo/semantics/article 2020 ftunivmilanoair https://doi.org/10.1111/febs.15354 2024-01-23T23:39:05Z To survive in cold environments, psychrophilic organisms produce enzymes endowed with high specific activity at low temperature. The structure of these enzymes is usually flexible and mostly thermolabile. In this work, we investigate the structural basis of cold adaptation of a GH42 beta-galactosidase from the psychrophilic Marinomonas ef1. This enzyme couples cold activity with astonishing robustness for a psychrophilic protein, for it retains 23% of its highest activity at 5 degrees C and it is stable for several days at 37 degrees C and even 50 degrees C. Phylogenetic analyses indicate a close relationship with thermophilic beta-galactosidases, suggesting that the present-day enzyme evolved from a thermostable scaffold modeled by environmental selective pressure. The crystallographic structure reveals the overall similarity with GH42 enzymes, along with a hexameric arrangement (dimer of trimers) not found in psychrophilic, mesophilic, and thermophilic homologues. In the quaternary structure, protomers form a large central cavity, whose accessibility to the substrate is promoted by the dynamic behavior of surface loops, even at low temperature. A peculiar cooperative behavior of the enzyme is likely related to the increase of the internal cavity permeability triggered by heating. Overall, our results highlight a novel strategy of enzyme cold adaptation, based on the oligomerization state of the enzyme, which effectively challenges the paradigm of cold activity coupled with intrinsic thermolability. Article in Journal/Newspaper Antarc* Antarctic The University of Milan: Archivio Istituzionale della Ricerca (AIR) Antarctic The FEBS Journal 288 2 546 565 |
spellingShingle | cold adaptation cooperativity enzyme kinetic glycoside hydrolase psychrophilic enzyme Settore BIO/10 - Biochimica Settore BIO/17 - Istologia Settore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin) Mangiagalli, Marco Lapi, Michela Maione, Serena Orlando, Marco Brocca, Stefania Pesce, Alessandra Barbiroli, Alberto Camilloni, Carlo Pucciarelli, Sandra Lotti, Marina Nardini, Marco The co-existence of cold activity and thermal stability in an Antarctic GH42 β-galactosidase relies on its hexameric quaternary arrangement |
title | The co-existence of cold activity and thermal stability in an Antarctic GH42 β-galactosidase relies on its hexameric quaternary arrangement |
title_full | The co-existence of cold activity and thermal stability in an Antarctic GH42 β-galactosidase relies on its hexameric quaternary arrangement |
title_fullStr | The co-existence of cold activity and thermal stability in an Antarctic GH42 β-galactosidase relies on its hexameric quaternary arrangement |
title_full_unstemmed | The co-existence of cold activity and thermal stability in an Antarctic GH42 β-galactosidase relies on its hexameric quaternary arrangement |
title_short | The co-existence of cold activity and thermal stability in an Antarctic GH42 β-galactosidase relies on its hexameric quaternary arrangement |
title_sort | co-existence of cold activity and thermal stability in an antarctic gh42 β-galactosidase relies on its hexameric quaternary arrangement |
topic | cold adaptation cooperativity enzyme kinetic glycoside hydrolase psychrophilic enzyme Settore BIO/10 - Biochimica Settore BIO/17 - Istologia Settore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin) |
topic_facet | cold adaptation cooperativity enzyme kinetic glycoside hydrolase psychrophilic enzyme Settore BIO/10 - Biochimica Settore BIO/17 - Istologia Settore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin) |
url | http://hdl.handle.net/2434/738623 https://doi.org/10.1111/febs.15354 |