Estimation of phylogenetic divergence times in Panagrolaimidae and other nematodes using relaxed molecular clocks calibrated with insect and crustacean fossils

This study presents the use of relaxed molecular clock methods to infer the dates of divergence between Panagrolaimus species. Autocorrelated relaxed tree methods, combined with well characterised fossil calibration dates, yield estimates of nematode divergence dates in accordance with the palaeonto...

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Main Authors: McGill, Lorraine M., Fitzpatrick, David A., Pisani, Davide, Burnell, Ann
Format: Article in Journal/Newspaper
Language:English
Published: Brill Academic Publishers 2017
Subjects:
Online Access:https://mural.maynoothuniversity.ie/11066/
https://mural.maynoothuniversity.ie/11066/1/DF-Estimation-2017.pdf
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spelling ftunivmaynooth:oai:mural.maynoothuniversity.ie:11066 2023-05-15T13:51:44+02:00 Estimation of phylogenetic divergence times in Panagrolaimidae and other nematodes using relaxed molecular clocks calibrated with insect and crustacean fossils McGill, Lorraine M. Fitzpatrick, David A. Pisani, Davide Burnell, Ann 2017 text https://mural.maynoothuniversity.ie/11066/ https://mural.maynoothuniversity.ie/11066/1/DF-Estimation-2017.pdf en eng Brill Academic Publishers https://mural.maynoothuniversity.ie/11066/1/DF-Estimation-2017.pdf McGill, Lorraine M. and Fitzpatrick, David A. and Pisani, Davide and Burnell, Ann (2017) Estimation of phylogenetic divergence times in Panagrolaimidae and other nematodes using relaxed molecular clocks calibrated with insect and crustacean fossils. Nematology, 19 (8). pp. 899-913. ISSN 1568-5411 Article PeerReviewed 2017 ftunivmaynooth 2022-06-13T18:46:38Z This study presents the use of relaxed molecular clock methods to infer the dates of divergence between Panagrolaimus species. Autocorrelated relaxed tree methods, combined with well characterised fossil calibration dates, yield estimates of nematode divergence dates in accordance with the palaeontological age of fossil ascarid eggs and with the previously estimated date of 18 Ma (range 11.6 to 29.9 Ma) for the divergence of the Caenorhabditis lineage. Our data indicate that Panagrolaimus davidi from Antarctica separated ca 21.98 Ma from its currently known, most closely related strain. Thus, P. davidi may have existed in Antarctica prior to the Last Glacial Maximum, although this seems unlikely as it shares physiological and life history traits with closely related nematodes from temperate climates. These traits may have facilitated colonisation of Antarctica by P. davidi after the quaternary glaciation, analogous to the colonisation of Surtsey Island, Iceland, by P. superbus after its volcanic formation. This study demonstrates that autocorrelated relaxed tree methods combined with well characterised fossil calibration dates may be used as a method to estimate the divergence dates within nematodes in order to gain insight into their evolutionary history. Article in Journal/Newspaper Antarc* Antarctica Iceland Surtsey Maynooth University ePrints and eTheses Archive (National University of Ireland) Surtsey ENVELOPE(-20.608,-20.608,63.301,63.301)
institution Open Polar
collection Maynooth University ePrints and eTheses Archive (National University of Ireland)
op_collection_id ftunivmaynooth
language English
description This study presents the use of relaxed molecular clock methods to infer the dates of divergence between Panagrolaimus species. Autocorrelated relaxed tree methods, combined with well characterised fossil calibration dates, yield estimates of nematode divergence dates in accordance with the palaeontological age of fossil ascarid eggs and with the previously estimated date of 18 Ma (range 11.6 to 29.9 Ma) for the divergence of the Caenorhabditis lineage. Our data indicate that Panagrolaimus davidi from Antarctica separated ca 21.98 Ma from its currently known, most closely related strain. Thus, P. davidi may have existed in Antarctica prior to the Last Glacial Maximum, although this seems unlikely as it shares physiological and life history traits with closely related nematodes from temperate climates. These traits may have facilitated colonisation of Antarctica by P. davidi after the quaternary glaciation, analogous to the colonisation of Surtsey Island, Iceland, by P. superbus after its volcanic formation. This study demonstrates that autocorrelated relaxed tree methods combined with well characterised fossil calibration dates may be used as a method to estimate the divergence dates within nematodes in order to gain insight into their evolutionary history.
format Article in Journal/Newspaper
author McGill, Lorraine M.
Fitzpatrick, David A.
Pisani, Davide
Burnell, Ann
spellingShingle McGill, Lorraine M.
Fitzpatrick, David A.
Pisani, Davide
Burnell, Ann
Estimation of phylogenetic divergence times in Panagrolaimidae and other nematodes using relaxed molecular clocks calibrated with insect and crustacean fossils
author_facet McGill, Lorraine M.
Fitzpatrick, David A.
Pisani, Davide
Burnell, Ann
author_sort McGill, Lorraine M.
title Estimation of phylogenetic divergence times in Panagrolaimidae and other nematodes using relaxed molecular clocks calibrated with insect and crustacean fossils
title_short Estimation of phylogenetic divergence times in Panagrolaimidae and other nematodes using relaxed molecular clocks calibrated with insect and crustacean fossils
title_full Estimation of phylogenetic divergence times in Panagrolaimidae and other nematodes using relaxed molecular clocks calibrated with insect and crustacean fossils
title_fullStr Estimation of phylogenetic divergence times in Panagrolaimidae and other nematodes using relaxed molecular clocks calibrated with insect and crustacean fossils
title_full_unstemmed Estimation of phylogenetic divergence times in Panagrolaimidae and other nematodes using relaxed molecular clocks calibrated with insect and crustacean fossils
title_sort estimation of phylogenetic divergence times in panagrolaimidae and other nematodes using relaxed molecular clocks calibrated with insect and crustacean fossils
publisher Brill Academic Publishers
publishDate 2017
url https://mural.maynoothuniversity.ie/11066/
https://mural.maynoothuniversity.ie/11066/1/DF-Estimation-2017.pdf
long_lat ENVELOPE(-20.608,-20.608,63.301,63.301)
geographic Surtsey
geographic_facet Surtsey
genre Antarc*
Antarctica
Iceland
Surtsey
genre_facet Antarc*
Antarctica
Iceland
Surtsey
op_relation https://mural.maynoothuniversity.ie/11066/1/DF-Estimation-2017.pdf
McGill, Lorraine M. and Fitzpatrick, David A. and Pisani, Davide and Burnell, Ann (2017) Estimation of phylogenetic divergence times in Panagrolaimidae and other nematodes using relaxed molecular clocks calibrated with insect and crustacean fossils. Nematology, 19 (8). pp. 899-913. ISSN 1568-5411
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