Unravelling the adaptation strategies employed by Glaciozyma antarctica PI12 on Antarctic sea ice

• Published in: Marine Environmental Research
• Main Authors: Bharudin, Izwan, Abu Bakar, Mohd. Faizal, Hashim, Noor Haza Fazlin, Mat Isa, Mohd. Noor, Alias, Halimah, Raih, Mohd. Firdaus, Md. Illias, Rosli, Najimudin, N., Mahadi, Nor Muhammad, Abu Bakar, Farah Diba, Abdul Murad, Abdul Munir
• Format: Article in Journal/Newspaper
• Language: unknown
• Published: Elsevier Ltd 2018
• Subjects: Q Science (General); Antarctic; Antarc*; Antarctica; Sea ice
• Online Access: http://eprints.utm.my/85018/; https://doi.org/10.1016/j.marenvres.2018.03.007

Glaciozyma antarctica PI12, is a psychrophilic yeast isolated from Antarctic sea. In this work, Expressed Sequence Tags (EST) from cells exposed to three different temperatures; 15 °C, 0 °C and −12 °C were generated to identify genes associated with cold adaptation. A total of 5376 clones from each library were randomly picked and sequenced. Comparative analyses from the resulting ESTs in each condition identified several groups of genes required for cold adaptation. Additionally, 319 unique transcripts that encoded uncharacterised functions were identified in the −12 °C library and are currently unique to G. antarctica. Gene expression analysis using RT-qPCR revealed two of the unknown genes to be up-regulated at −12 °C compared to 0 °C and 15 °C. These findings further contribute to the collective knowledge into G. antarctica cold adaptation and as a resource for understanding the ecological and physiological tolerance of psychrophilic microbes in general.