Identification of dehalogenase producing phychrotophic bacteria
2, 2 dichloropropionic acids (Dalapon) like most halogenated compounds are commonly used as herbicides and employed in agricultural areas and industries. Toxicity of these xenobiotic compounds causes serious environmental problems. Bacillus sp ih1 was isolated from top cliff soil collected from Anta...
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ftunivmalaysia:oai:generic.eprints.org:79326 2023-11-12T04:05:28+01:00 Identification of dehalogenase producing phychrotophic bacteria Haruna, Ismail 2016 application/pdf http://eprints.utm.my/79326/ http://eprints.utm.my/79326/1/IsmailHarunaMFBME2016.pdf en eng http://eprints.utm.my/79326/1/IsmailHarunaMFBME2016.pdf Haruna, Ismail (2016) Identification of dehalogenase producing phychrotophic bacteria. Masters thesis, Universiti Teknologi Malaysia, Faculty of Biosciences and Medical Engineering. QH Natural history Thesis NonPeerReviewed 2016 ftunivmalaysia 2023-10-24T17:59:29Z 2, 2 dichloropropionic acids (Dalapon) like most halogenated compounds are commonly used as herbicides and employed in agricultural areas and industries. Toxicity of these xenobiotic compounds causes serious environmental problems. Bacillus sp ih1 was isolated from top cliff soil collected from Antarctica. The bacteria was first grown on Antarctic bacterial medium and later transferred to a minimal medium containing 2, 2, dichloropropionic acid as carbon source. It grew slowly in the minimal media in different concentrations of 10mM, 20mM, 30mM and 40mM of 2, 2 DCP. The best growth was observed in 20mM of 2, 2-DCP with doubling time 32hours. To monitor the degradation activity of the bacteria, halide ion assay was carried out to check the release of chloride ion. The best release of chloride was 0.657 mmol/L in 20mM of 2, 2-DCP. The bacteria was identification using 16S rRNA, genomic DNA extraction method and PCR amplification of 16S rRNA was performed using universal primers 27F and 1492R. Nucleotide blast (BLASTn) showed 97% similarity with bacillus sp. Results from biochemical tests further confirm the bacteria as bacillus sp. Using phylogeny.fr, sequences from nucleotide blast result were used to build a phylogeny tree based on neighbour to neighbour joining. Thesis Antarc* Antarctic Antarctica Universiti Teknologi Malaysia: Institutional Repository Antarctic |
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Universiti Teknologi Malaysia: Institutional Repository |
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QH Natural history Haruna, Ismail Identification of dehalogenase producing phychrotophic bacteria |
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QH Natural history |
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2, 2 dichloropropionic acids (Dalapon) like most halogenated compounds are commonly used as herbicides and employed in agricultural areas and industries. Toxicity of these xenobiotic compounds causes serious environmental problems. Bacillus sp ih1 was isolated from top cliff soil collected from Antarctica. The bacteria was first grown on Antarctic bacterial medium and later transferred to a minimal medium containing 2, 2, dichloropropionic acid as carbon source. It grew slowly in the minimal media in different concentrations of 10mM, 20mM, 30mM and 40mM of 2, 2 DCP. The best growth was observed in 20mM of 2, 2-DCP with doubling time 32hours. To monitor the degradation activity of the bacteria, halide ion assay was carried out to check the release of chloride ion. The best release of chloride was 0.657 mmol/L in 20mM of 2, 2-DCP. The bacteria was identification using 16S rRNA, genomic DNA extraction method and PCR amplification of 16S rRNA was performed using universal primers 27F and 1492R. Nucleotide blast (BLASTn) showed 97% similarity with bacillus sp. Results from biochemical tests further confirm the bacteria as bacillus sp. Using phylogeny.fr, sequences from nucleotide blast result were used to build a phylogeny tree based on neighbour to neighbour joining. |
format |
Thesis |
author |
Haruna, Ismail |
author_facet |
Haruna, Ismail |
author_sort |
Haruna, Ismail |
title |
Identification of dehalogenase producing phychrotophic bacteria |
title_short |
Identification of dehalogenase producing phychrotophic bacteria |
title_full |
Identification of dehalogenase producing phychrotophic bacteria |
title_fullStr |
Identification of dehalogenase producing phychrotophic bacteria |
title_full_unstemmed |
Identification of dehalogenase producing phychrotophic bacteria |
title_sort |
identification of dehalogenase producing phychrotophic bacteria |
publishDate |
2016 |
url |
http://eprints.utm.my/79326/ http://eprints.utm.my/79326/1/IsmailHarunaMFBME2016.pdf |
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Antarctic |
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Antarctic |
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Antarc* Antarctic Antarctica |
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Antarc* Antarctic Antarctica |
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http://eprints.utm.my/79326/1/IsmailHarunaMFBME2016.pdf Haruna, Ismail (2016) Identification of dehalogenase producing phychrotophic bacteria. Masters thesis, Universiti Teknologi Malaysia, Faculty of Biosciences and Medical Engineering. |
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