Patterns in The Distribution of Soil Bacterial 16S rRNA Gene Sequences from Different Regions of Antarctica

Since the advent of 16S rRNA gene-based molecular analysis, an increasing amount of work has been conducted on the Antarctic soil bacterial community. The majority of such studies suggest that the Antarctic soil environment may harbour a greater diversity of bacteria than was previously thought, and...

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Main Authors: Chong, C.W., Pearce, D.A., Convey, P., Yew, W.C., Tan, I.K.P.
Format: Article in Journal/Newspaper
Language:unknown
Published: 2012
Subjects:
Online Access:http://eprints.um.edu.my/5407/
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spelling ftunivmalaya:oai:generic.eprints.org:5407 2023-05-15T13:57:24+02:00 Patterns in The Distribution of Soil Bacterial 16S rRNA Gene Sequences from Different Regions of Antarctica Chong, C.W. Pearce, D.A. Convey, P. Yew, W.C. Tan, I.K.P. 2012 http://eprints.um.edu.my/5407/ unknown Chong, C.W.; Pearce, D.A.; Convey, P.; Yew, W.C.; Tan, I.K.P. (2012) Patterns in The Distribution of Soil Bacterial 16S rRNA Gene Sequences from Different Regions of Antarctica. Geoderma <http://eprints.um.edu.my/view/publication/Geoderma.html>, 181. pp. 45-55. ISSN 0016-7061 Q Science (General) QR Microbiology Article PeerReviewed 2012 ftunivmalaya 2015-12-23T16:01:48Z Since the advent of 16S rRNA gene-based molecular analysis, an increasing amount of work has been conducted on the Antarctic soil bacterial community. The majority of such studies suggest that the Antarctic soil environment may harbour a greater diversity of bacteria than was previously thought, and indeed that a proportion of the bacterial species found might be unique to the Antarctic. However, few have looked at the distribution of soil sequence types from different biogeographic regions of the continent. Here, we assess the taxonomic distribution of soil bacteria from different regions and latitudes in Antarctica by integrating 16S rRNA gene sequence information from 13 independent studies that, together, obtained samples from 35 locations ranging from 51 degrees S to 78 degrees S. The majority of these formed a transect across the continent, representing most of the ice-free regions of the Antarctic Peninsula and Scott Sector. Using detailed phylogenetic analysis, we found that most of the Antarctic soil environments contained a narrow range of bacterial species when compared to the overall number of sequences available. Further, patterns in the taxonomic distribution of Antarctic soil bacterial communities were significantly correlated to both the underlying soil parameters and geographic (regional) origins. (C) 2012 Elsevier B.V. All rights reserved. Article in Journal/Newspaper Antarc* Antarctic Antarctic Peninsula Antarctica University of Malaya: UM Institutional Repository Antarctic Antarctic Peninsula The Antarctic
institution Open Polar
collection University of Malaya: UM Institutional Repository
op_collection_id ftunivmalaya
language unknown
topic Q Science (General)
QR Microbiology
spellingShingle Q Science (General)
QR Microbiology
Chong, C.W.
Pearce, D.A.
Convey, P.
Yew, W.C.
Tan, I.K.P.
Patterns in The Distribution of Soil Bacterial 16S rRNA Gene Sequences from Different Regions of Antarctica
topic_facet Q Science (General)
QR Microbiology
description Since the advent of 16S rRNA gene-based molecular analysis, an increasing amount of work has been conducted on the Antarctic soil bacterial community. The majority of such studies suggest that the Antarctic soil environment may harbour a greater diversity of bacteria than was previously thought, and indeed that a proportion of the bacterial species found might be unique to the Antarctic. However, few have looked at the distribution of soil sequence types from different biogeographic regions of the continent. Here, we assess the taxonomic distribution of soil bacteria from different regions and latitudes in Antarctica by integrating 16S rRNA gene sequence information from 13 independent studies that, together, obtained samples from 35 locations ranging from 51 degrees S to 78 degrees S. The majority of these formed a transect across the continent, representing most of the ice-free regions of the Antarctic Peninsula and Scott Sector. Using detailed phylogenetic analysis, we found that most of the Antarctic soil environments contained a narrow range of bacterial species when compared to the overall number of sequences available. Further, patterns in the taxonomic distribution of Antarctic soil bacterial communities were significantly correlated to both the underlying soil parameters and geographic (regional) origins. (C) 2012 Elsevier B.V. All rights reserved.
format Article in Journal/Newspaper
author Chong, C.W.
Pearce, D.A.
Convey, P.
Yew, W.C.
Tan, I.K.P.
author_facet Chong, C.W.
Pearce, D.A.
Convey, P.
Yew, W.C.
Tan, I.K.P.
author_sort Chong, C.W.
title Patterns in The Distribution of Soil Bacterial 16S rRNA Gene Sequences from Different Regions of Antarctica
title_short Patterns in The Distribution of Soil Bacterial 16S rRNA Gene Sequences from Different Regions of Antarctica
title_full Patterns in The Distribution of Soil Bacterial 16S rRNA Gene Sequences from Different Regions of Antarctica
title_fullStr Patterns in The Distribution of Soil Bacterial 16S rRNA Gene Sequences from Different Regions of Antarctica
title_full_unstemmed Patterns in The Distribution of Soil Bacterial 16S rRNA Gene Sequences from Different Regions of Antarctica
title_sort patterns in the distribution of soil bacterial 16s rrna gene sequences from different regions of antarctica
publishDate 2012
url http://eprints.um.edu.my/5407/
geographic Antarctic
Antarctic Peninsula
The Antarctic
geographic_facet Antarctic
Antarctic Peninsula
The Antarctic
genre Antarc*
Antarctic
Antarctic Peninsula
Antarctica
genre_facet Antarc*
Antarctic
Antarctic Peninsula
Antarctica
op_relation Chong, C.W.; Pearce, D.A.; Convey, P.; Yew, W.C.; Tan, I.K.P. (2012) Patterns in The Distribution of Soil Bacterial 16S rRNA Gene Sequences from Different Regions of Antarctica. Geoderma <http://eprints.um.edu.my/view/publication/Geoderma.html>, 181. pp. 45-55. ISSN 0016-7061
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