Gene expression profile of marine Chlorella strains from different latitudes: stress and recovery under elevated temperatures

Global warming, as a consequence of climate change, poses a critical threat to marine life, including algae. Studies on algal response at the molecular level to temperature stress have been significantly improved by advances in omics technologies. Algae are known to employ various strategies in resp...

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Published in:Journal of Applied Phycology
Main Authors: Barati, Bahram, Lim, Phaik Eem, Gan, Sook Yee, Poong, Sze Wan, Phang, Siew Moi
Format: Article in Journal/Newspaper
Language:unknown
Published: Springer Verlag 2018
Subjects:
Online Access:http://eprints.um.edu.my/22355/
https://doi.org/10.1007/s10811-018-1588-x
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spelling ftunivmalaya:oai:eprints.um.edu.my:22355 2023-05-15T13:54:20+02:00 Gene expression profile of marine Chlorella strains from different latitudes: stress and recovery under elevated temperatures Barati, Bahram Lim, Phaik Eem Gan, Sook Yee Poong, Sze Wan Phang, Siew Moi 2018 http://eprints.um.edu.my/22355/ https://doi.org/10.1007/s10811-018-1588-x unknown Springer Verlag Barati, Bahram and Lim, Phaik Eem and Gan, Sook Yee and Poong, Sze Wan and Phang, Siew Moi (2018) Gene expression profile of marine Chlorella strains from different latitudes: stress and recovery under elevated temperatures. Journal of Applied Phycology, 30 (6). pp. 3121-3130. ISSN 0921-8971 Q Science (General) QH Natural history Article PeerReviewed 2018 ftunivmalaya https://doi.org/10.1007/s10811-018-1588-x 2019-09-17T15:10:18Z Global warming, as a consequence of climate change, poses a critical threat to marine life, including algae. Studies on algal response at the molecular level to temperature stress have been significantly improved by advances in omics technologies. Algae are known to employ various strategies in response to heat stress. For example, algae regulate starch synthesis to provide energy for the cell or rebuild the damaged subunits of photosystems to regain photosynthetic activity. The aim of the present study is to examine the expression of selected photosynthesis-related genes of marine Chlorella originating from different latitudes, in response to heat stress and during the recovery period. In this study, marine Chlorella strains from the Antarctic, temperate region, and the tropics were grown at their ambient and stress-inducing temperatures. The maximum quantum efficiency (F v /F m ) photosynthetic parameter was used to assess their stress levels. When subjected to heat stress, the F v /F m began to decline and when it reached ~ 0.2, the cultures were transferred to their respective ambient temperature for recovery. Total RNA was isolated from these cultures at F v /F m ~ 0.4, 0.2, and when it regained 0.4 during recovery. The expression of four genes including psbA, psaB, psbC, and rbcL was analyzed using RT-PCR. The housekeeping gene, histone subunit three (H3) was used for data normalization. Studying the genes involved in the adaptation mechanisms would enhance our knowledge on algal adaptation pathways and pave the way for genetic engineers to develop more tolerant strains. Article in Journal/Newspaper Antarc* Antarctic University of Malaya: UM Institutional Repository Antarctic The Antarctic Journal of Applied Phycology 30 6 3121 3130
institution Open Polar
collection University of Malaya: UM Institutional Repository
op_collection_id ftunivmalaya
language unknown
topic Q Science (General)
QH Natural history
spellingShingle Q Science (General)
QH Natural history
Barati, Bahram
Lim, Phaik Eem
Gan, Sook Yee
Poong, Sze Wan
Phang, Siew Moi
Gene expression profile of marine Chlorella strains from different latitudes: stress and recovery under elevated temperatures
topic_facet Q Science (General)
QH Natural history
description Global warming, as a consequence of climate change, poses a critical threat to marine life, including algae. Studies on algal response at the molecular level to temperature stress have been significantly improved by advances in omics technologies. Algae are known to employ various strategies in response to heat stress. For example, algae regulate starch synthesis to provide energy for the cell or rebuild the damaged subunits of photosystems to regain photosynthetic activity. The aim of the present study is to examine the expression of selected photosynthesis-related genes of marine Chlorella originating from different latitudes, in response to heat stress and during the recovery period. In this study, marine Chlorella strains from the Antarctic, temperate region, and the tropics were grown at their ambient and stress-inducing temperatures. The maximum quantum efficiency (F v /F m ) photosynthetic parameter was used to assess their stress levels. When subjected to heat stress, the F v /F m began to decline and when it reached ~ 0.2, the cultures were transferred to their respective ambient temperature for recovery. Total RNA was isolated from these cultures at F v /F m ~ 0.4, 0.2, and when it regained 0.4 during recovery. The expression of four genes including psbA, psaB, psbC, and rbcL was analyzed using RT-PCR. The housekeeping gene, histone subunit three (H3) was used for data normalization. Studying the genes involved in the adaptation mechanisms would enhance our knowledge on algal adaptation pathways and pave the way for genetic engineers to develop more tolerant strains.
format Article in Journal/Newspaper
author Barati, Bahram
Lim, Phaik Eem
Gan, Sook Yee
Poong, Sze Wan
Phang, Siew Moi
author_facet Barati, Bahram
Lim, Phaik Eem
Gan, Sook Yee
Poong, Sze Wan
Phang, Siew Moi
author_sort Barati, Bahram
title Gene expression profile of marine Chlorella strains from different latitudes: stress and recovery under elevated temperatures
title_short Gene expression profile of marine Chlorella strains from different latitudes: stress and recovery under elevated temperatures
title_full Gene expression profile of marine Chlorella strains from different latitudes: stress and recovery under elevated temperatures
title_fullStr Gene expression profile of marine Chlorella strains from different latitudes: stress and recovery under elevated temperatures
title_full_unstemmed Gene expression profile of marine Chlorella strains from different latitudes: stress and recovery under elevated temperatures
title_sort gene expression profile of marine chlorella strains from different latitudes: stress and recovery under elevated temperatures
publisher Springer Verlag
publishDate 2018
url http://eprints.um.edu.my/22355/
https://doi.org/10.1007/s10811-018-1588-x
geographic Antarctic
The Antarctic
geographic_facet Antarctic
The Antarctic
genre Antarc*
Antarctic
genre_facet Antarc*
Antarctic
op_relation Barati, Bahram and Lim, Phaik Eem and Gan, Sook Yee and Poong, Sze Wan and Phang, Siew Moi (2018) Gene expression profile of marine Chlorella strains from different latitudes: stress and recovery under elevated temperatures. Journal of Applied Phycology, 30 (6). pp. 3121-3130. ISSN 0921-8971
op_doi https://doi.org/10.1007/s10811-018-1588-x
container_title Journal of Applied Phycology
container_volume 30
container_issue 6
container_start_page 3121
op_container_end_page 3130
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