The Plankton Lifeform Extraction Tool: a digital tool to increase the discoverability and usability of plankton time-series data
International audience Plankton form the base of the marine food web and are sensitive indicators of environmental change. Plankton time series are therefore an essential part of monitoring progress towards global biodiversity goals, such as the Convention on Biological Diversity Aichi Targets, and...
Published in: | Earth System Science Data |
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Main Authors: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Other Authors: | , , |
Format: | Article in Journal/Newspaper |
Language: | English |
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HAL CCSD
2021
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Online Access: | https://insu.hal.science/insu-03664861 https://insu.hal.science/insu-03664861/document https://insu.hal.science/insu-03664861/file/essd-13-5617-2021.pdf https://doi.org/10.5194/essd-13-5617-2021 |
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LillOA (HAL Lille Open Archive, Université de Lille) |
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English |
topic |
[SDU]Sciences of the Universe [physics] |
spellingShingle |
[SDU]Sciences of the Universe [physics] Ostle, Clare Paxman, Kevin Graves, Carolyn A. Arnold, Mathew Artigas, Luis Felipe Atkinson, Angus Aubert, Anaïs Baptie, Malcolm Bear, Beth Bedford, Jacob Best, Michael Bresnan, Eileen Brittain, Rachel Broughton, Derek Budria, Alexandre Cook, Kathryn Devlin, Michelle Graham, George Halliday, Nick Hélaouët, Pierre Johansen, Marie Johns, David G. Lear, Dan Machairopoulou, Margarita Mckinney, April Mellor, Adam Milligan, Alex Pitois, Sophie Rombouts, Isabelle Scherer, Cordula Tett, Paul Widdicombe, Claire Mcquatters-Gollop, Abigail The Plankton Lifeform Extraction Tool: a digital tool to increase the discoverability and usability of plankton time-series data |
topic_facet |
[SDU]Sciences of the Universe [physics] |
description |
International audience Plankton form the base of the marine food web and are sensitive indicators of environmental change. Plankton time series are therefore an essential part of monitoring progress towards global biodiversity goals, such as the Convention on Biological Diversity Aichi Targets, and for informing ecosystem-based policy, such as the EU Marine Strategy Framework Directive. Multiple plankton monitoring programmes exist in Europe, but differences in sampling and analysis methods prevent the integration of their data, constraining their utility over large spatio-temporal scales. The Plankton Lifeform Extraction Tool brings together disparate European plankton datasets into a central database from which it extracts abundance time series of plankton functional groups, called "lifeforms", according to shared biological traits. This tool has been designed to make complex plankton datasets accessible and meaningful for policy, public interest, and scientific discovery. It allows examination of large-scale shifts in lifeform abundance or distribution (for example, holoplankton being partially replaced by meroplankton), providing clues to how the marine environment is changing. The lifeform method enables datasets with different plankton sampling and taxonomic analysis methodologies to be used together to provide insights into the response to multiple stressors and robust policy evidence for decision making. Lifeform time series generated with the Plankton Lifeform Extraction Tool currently inform plankton and food web indicators for the UK's Marine Strategy, the EU's Marine Strategy Framework Directive, and for the Convention for the Protection of the Marine Environment of the North-East Atlantic (OSPAR) biodiversity assessments. The Plankton Lifeform Extraction Tool currently integrates 155 000 samples, containing over 44 million plankton records, from nine different plankton datasets within UK and European seas, collected between 1924 and 2017. Additional datasets can be added, and time series can be ... |
author2 |
Laboratoire d’Océanologie et de Géosciences (LOG) - UMR 8187 (LOG) Institut national des sciences de l'Univers (INSU - CNRS)-Université du Littoral Côte d'Opale (ULCO)-Université de Lille-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD France-Nord ) Université du Littoral Côte d'Opale (ULCO) |
format |
Article in Journal/Newspaper |
author |
Ostle, Clare Paxman, Kevin Graves, Carolyn A. Arnold, Mathew Artigas, Luis Felipe Atkinson, Angus Aubert, Anaïs Baptie, Malcolm Bear, Beth Bedford, Jacob Best, Michael Bresnan, Eileen Brittain, Rachel Broughton, Derek Budria, Alexandre Cook, Kathryn Devlin, Michelle Graham, George Halliday, Nick Hélaouët, Pierre Johansen, Marie Johns, David G. Lear, Dan Machairopoulou, Margarita Mckinney, April Mellor, Adam Milligan, Alex Pitois, Sophie Rombouts, Isabelle Scherer, Cordula Tett, Paul Widdicombe, Claire Mcquatters-Gollop, Abigail |
author_facet |
Ostle, Clare Paxman, Kevin Graves, Carolyn A. Arnold, Mathew Artigas, Luis Felipe Atkinson, Angus Aubert, Anaïs Baptie, Malcolm Bear, Beth Bedford, Jacob Best, Michael Bresnan, Eileen Brittain, Rachel Broughton, Derek Budria, Alexandre Cook, Kathryn Devlin, Michelle Graham, George Halliday, Nick Hélaouët, Pierre Johansen, Marie Johns, David G. Lear, Dan Machairopoulou, Margarita Mckinney, April Mellor, Adam Milligan, Alex Pitois, Sophie Rombouts, Isabelle Scherer, Cordula Tett, Paul Widdicombe, Claire Mcquatters-Gollop, Abigail |
author_sort |
Ostle, Clare |
title |
The Plankton Lifeform Extraction Tool: a digital tool to increase the discoverability and usability of plankton time-series data |
title_short |
The Plankton Lifeform Extraction Tool: a digital tool to increase the discoverability and usability of plankton time-series data |
title_full |
The Plankton Lifeform Extraction Tool: a digital tool to increase the discoverability and usability of plankton time-series data |
title_fullStr |
The Plankton Lifeform Extraction Tool: a digital tool to increase the discoverability and usability of plankton time-series data |
title_full_unstemmed |
The Plankton Lifeform Extraction Tool: a digital tool to increase the discoverability and usability of plankton time-series data |
title_sort |
plankton lifeform extraction tool: a digital tool to increase the discoverability and usability of plankton time-series data |
publisher |
HAL CCSD |
publishDate |
2021 |
url |
https://insu.hal.science/insu-03664861 https://insu.hal.science/insu-03664861/document https://insu.hal.science/insu-03664861/file/essd-13-5617-2021.pdf https://doi.org/10.5194/essd-13-5617-2021 |
genre |
North East Atlantic |
genre_facet |
North East Atlantic |
op_source |
ISSN: 1866-3508 Earth System Science Data https://insu.hal.science/insu-03664861 Earth System Science Data, 2021, 13 (12), pp.5617-5642. ⟨10.5194/essd-13-5617-2021⟩ |
op_relation |
info:eu-repo/semantics/altIdentifier/doi/10.5194/essd-13-5617-2021 insu-03664861 https://insu.hal.science/insu-03664861 https://insu.hal.science/insu-03664861/document https://insu.hal.science/insu-03664861/file/essd-13-5617-2021.pdf BIBCODE: 2021ESSD.13.5617O doi:10.5194/essd-13-5617-2021 |
op_rights |
http://creativecommons.org/licenses/by/ info:eu-repo/semantics/OpenAccess |
op_doi |
https://doi.org/10.5194/essd-13-5617-2021 |
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Earth System Science Data |
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13 |
container_issue |
12 |
container_start_page |
5617 |
op_container_end_page |
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spelling |
ftunivlille:oai:HAL:insu-03664861v1 2024-06-23T07:55:23+00:00 The Plankton Lifeform Extraction Tool: a digital tool to increase the discoverability and usability of plankton time-series data Ostle, Clare Paxman, Kevin Graves, Carolyn A. Arnold, Mathew Artigas, Luis Felipe Atkinson, Angus Aubert, Anaïs Baptie, Malcolm Bear, Beth Bedford, Jacob Best, Michael Bresnan, Eileen Brittain, Rachel Broughton, Derek Budria, Alexandre Cook, Kathryn Devlin, Michelle Graham, George Halliday, Nick Hélaouët, Pierre Johansen, Marie Johns, David G. Lear, Dan Machairopoulou, Margarita Mckinney, April Mellor, Adam Milligan, Alex Pitois, Sophie Rombouts, Isabelle Scherer, Cordula Tett, Paul Widdicombe, Claire Mcquatters-Gollop, Abigail Laboratoire d’Océanologie et de Géosciences (LOG) - UMR 8187 (LOG) Institut national des sciences de l'Univers (INSU - CNRS)-Université du Littoral Côte d'Opale (ULCO)-Université de Lille-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD France-Nord ) Université du Littoral Côte d'Opale (ULCO) 2021-12-06 https://insu.hal.science/insu-03664861 https://insu.hal.science/insu-03664861/document https://insu.hal.science/insu-03664861/file/essd-13-5617-2021.pdf https://doi.org/10.5194/essd-13-5617-2021 en eng HAL CCSD Copernicus Publications info:eu-repo/semantics/altIdentifier/doi/10.5194/essd-13-5617-2021 insu-03664861 https://insu.hal.science/insu-03664861 https://insu.hal.science/insu-03664861/document https://insu.hal.science/insu-03664861/file/essd-13-5617-2021.pdf BIBCODE: 2021ESSD.13.5617O doi:10.5194/essd-13-5617-2021 http://creativecommons.org/licenses/by/ info:eu-repo/semantics/OpenAccess ISSN: 1866-3508 Earth System Science Data https://insu.hal.science/insu-03664861 Earth System Science Data, 2021, 13 (12), pp.5617-5642. ⟨10.5194/essd-13-5617-2021⟩ [SDU]Sciences of the Universe [physics] info:eu-repo/semantics/article Journal articles 2021 ftunivlille https://doi.org/10.5194/essd-13-5617-2021 2024-06-10T14:52:01Z International audience Plankton form the base of the marine food web and are sensitive indicators of environmental change. Plankton time series are therefore an essential part of monitoring progress towards global biodiversity goals, such as the Convention on Biological Diversity Aichi Targets, and for informing ecosystem-based policy, such as the EU Marine Strategy Framework Directive. Multiple plankton monitoring programmes exist in Europe, but differences in sampling and analysis methods prevent the integration of their data, constraining their utility over large spatio-temporal scales. The Plankton Lifeform Extraction Tool brings together disparate European plankton datasets into a central database from which it extracts abundance time series of plankton functional groups, called "lifeforms", according to shared biological traits. This tool has been designed to make complex plankton datasets accessible and meaningful for policy, public interest, and scientific discovery. It allows examination of large-scale shifts in lifeform abundance or distribution (for example, holoplankton being partially replaced by meroplankton), providing clues to how the marine environment is changing. The lifeform method enables datasets with different plankton sampling and taxonomic analysis methodologies to be used together to provide insights into the response to multiple stressors and robust policy evidence for decision making. Lifeform time series generated with the Plankton Lifeform Extraction Tool currently inform plankton and food web indicators for the UK's Marine Strategy, the EU's Marine Strategy Framework Directive, and for the Convention for the Protection of the Marine Environment of the North-East Atlantic (OSPAR) biodiversity assessments. The Plankton Lifeform Extraction Tool currently integrates 155 000 samples, containing over 44 million plankton records, from nine different plankton datasets within UK and European seas, collected between 1924 and 2017. Additional datasets can be added, and time series can be ... Article in Journal/Newspaper North East Atlantic LillOA (HAL Lille Open Archive, Université de Lille) Earth System Science Data 13 12 5617 5642 |