Population genetic structure of water flea (daphnia pulex spp.) From gradients of lakes and ponds in Ilulissat region of Greenland

Daphnia has quickly emerged into model organism in ecology and evolution research. As a result it has been subjected to extensive studies in eco-toxicology, ecological genomics and population genetics studies. However, most of the population genetics studies of Daphnia have concentrated in temperate...

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Main Authors: Haileselasie, Tsegazeabe Hadush, Mergeay, Joachim, De Meester, Luc
Format: Conference Object
Language:English
Published: 2013
Subjects:
Online Access:https://lirias.kuleuven.be/handle/123456789/560139
https://lirias.kuleuven.be/bitstream/123456789/560139/1//Haileselasie-ESEB-August19-2013-Lisbon%5BPoster%5D.pdf
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spelling ftunivleuven:oai:lirias.kuleuven.be:123456789/560139 2023-05-15T15:16:02+02:00 Population genetic structure of water flea (daphnia pulex spp.) From gradients of lakes and ponds in Ilulissat region of Greenland Haileselasie, Tsegazeabe Hadush Mergeay, Joachim De Meester, Luc 2013-08-19 737590 bytes application/pdf https://lirias.kuleuven.be/handle/123456789/560139 https://lirias.kuleuven.be/bitstream/123456789/560139/1//Haileselasie-ESEB-August19-2013-Lisbon%5BPoster%5D.pdf en eng Congress of the European Society for Evolutionary Biology edition:XIV location:Lisbon, Portugal date:19-24 August 2013 https://lirias.kuleuven.be/handle/123456789/560139 https://lirias.kuleuven.be/bitstream/123456789/560139/1//Haileselasie-ESEB-August19-2013-Lisbon%5BPoster%5D.pdf 417627;intranet Conference paper/abstract IMa conference_paper 417627;Conference paper/abstract 2013 ftunivleuven 2017-06-02T19:42:55Z Daphnia has quickly emerged into model organism in ecology and evolution research. As a result it has been subjected to extensive studies in eco-toxicology, ecological genomics and population genetics studies. However, most of the population genetics studies of Daphnia have concentrated in temperate population and a few from arctic Canada. Given to its sensitivity to climate change, the expansion of such study into the polar region is of paramount importance. What is more, the study of population structure and diversity of organisms from the polar region can provide a unique opportunity to make inferences about postglacial colonization in areas that have recently been de-glaciated due to climate change and contribute to our understanding of colonization dynamics and founder events. Here, we assessed the spatial population genetic structure of Daphnia pulex spp. complex from a gradient of lakes and ponds in Greenland, which are recently created due to melting of the Greenland Ice Sheet. 61 population were sampled from 21 lakes and 40 ponds that vary in area, size and depth and genotyped at 9 microsatellite loci. Based on 9 microsatellite loci, we scored 1-9 MLGs/population which vary in their distribution, clonal diversity and mean clonal richness in each habitat studied. Clonal diversity ranges 1.22 to 3.65 and 1.22 to 3.72 for Lakes and ponds respectively. 20-90% expected heterozygosity was observed for both lakes and ponds. Furthermore, these ponds/lakes harbor two/more of the polyploidy members of Daphnia pulex spp. (i.e. Daphnia pulicaria, and Daphnia middendorffiana). However, Daphnia pulicaria seems to dominate [i.e. having high frequency of occurrence] compared to Daphnia middendorffiana. In general, our finding support hypothesis that polyploidy is dominant in marginalised and higher latitude. But this needs further confirmation by increasing the number individuals genotyped in a population and genetic marker used. status: accepted Conference Object Arctic Climate change Greenland Ice Sheet Ilulissat KU Leuven: Lirias Arctic Canada Greenland Ilulissat ENVELOPE(-51.099,-51.099,69.220,69.220)
institution Open Polar
collection KU Leuven: Lirias
op_collection_id ftunivleuven
language English
description Daphnia has quickly emerged into model organism in ecology and evolution research. As a result it has been subjected to extensive studies in eco-toxicology, ecological genomics and population genetics studies. However, most of the population genetics studies of Daphnia have concentrated in temperate population and a few from arctic Canada. Given to its sensitivity to climate change, the expansion of such study into the polar region is of paramount importance. What is more, the study of population structure and diversity of organisms from the polar region can provide a unique opportunity to make inferences about postglacial colonization in areas that have recently been de-glaciated due to climate change and contribute to our understanding of colonization dynamics and founder events. Here, we assessed the spatial population genetic structure of Daphnia pulex spp. complex from a gradient of lakes and ponds in Greenland, which are recently created due to melting of the Greenland Ice Sheet. 61 population were sampled from 21 lakes and 40 ponds that vary in area, size and depth and genotyped at 9 microsatellite loci. Based on 9 microsatellite loci, we scored 1-9 MLGs/population which vary in their distribution, clonal diversity and mean clonal richness in each habitat studied. Clonal diversity ranges 1.22 to 3.65 and 1.22 to 3.72 for Lakes and ponds respectively. 20-90% expected heterozygosity was observed for both lakes and ponds. Furthermore, these ponds/lakes harbor two/more of the polyploidy members of Daphnia pulex spp. (i.e. Daphnia pulicaria, and Daphnia middendorffiana). However, Daphnia pulicaria seems to dominate [i.e. having high frequency of occurrence] compared to Daphnia middendorffiana. In general, our finding support hypothesis that polyploidy is dominant in marginalised and higher latitude. But this needs further confirmation by increasing the number individuals genotyped in a population and genetic marker used. status: accepted
format Conference Object
author Haileselasie, Tsegazeabe Hadush
Mergeay, Joachim
De Meester, Luc
spellingShingle Haileselasie, Tsegazeabe Hadush
Mergeay, Joachim
De Meester, Luc
Population genetic structure of water flea (daphnia pulex spp.) From gradients of lakes and ponds in Ilulissat region of Greenland
author_facet Haileselasie, Tsegazeabe Hadush
Mergeay, Joachim
De Meester, Luc
author_sort Haileselasie, Tsegazeabe Hadush
title Population genetic structure of water flea (daphnia pulex spp.) From gradients of lakes and ponds in Ilulissat region of Greenland
title_short Population genetic structure of water flea (daphnia pulex spp.) From gradients of lakes and ponds in Ilulissat region of Greenland
title_full Population genetic structure of water flea (daphnia pulex spp.) From gradients of lakes and ponds in Ilulissat region of Greenland
title_fullStr Population genetic structure of water flea (daphnia pulex spp.) From gradients of lakes and ponds in Ilulissat region of Greenland
title_full_unstemmed Population genetic structure of water flea (daphnia pulex spp.) From gradients of lakes and ponds in Ilulissat region of Greenland
title_sort population genetic structure of water flea (daphnia pulex spp.) from gradients of lakes and ponds in ilulissat region of greenland
publishDate 2013
url https://lirias.kuleuven.be/handle/123456789/560139
https://lirias.kuleuven.be/bitstream/123456789/560139/1//Haileselasie-ESEB-August19-2013-Lisbon%5BPoster%5D.pdf
long_lat ENVELOPE(-51.099,-51.099,69.220,69.220)
geographic Arctic
Canada
Greenland
Ilulissat
geographic_facet Arctic
Canada
Greenland
Ilulissat
genre Arctic
Climate change
Greenland
Ice Sheet
Ilulissat
genre_facet Arctic
Climate change
Greenland
Ice Sheet
Ilulissat
op_relation Congress of the European Society for Evolutionary Biology edition:XIV location:Lisbon, Portugal date:19-24 August 2013
https://lirias.kuleuven.be/handle/123456789/560139
https://lirias.kuleuven.be/bitstream/123456789/560139/1//Haileselasie-ESEB-August19-2013-Lisbon%5BPoster%5D.pdf
op_rights 417627;intranet
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