Comparative antifreeze trait analyses of Antarctic and temperate sister species pairs shed light on tempo of adaptive trait loss under relaxed selection

Antarctic notothenioid fishes endemic to the ice-laden, freezing (-1.9°C) Southern Ocean survive by having evolved antifreeze glycoproteins (AFGP). Over evolutionary time several lineages have escaped the isolated frigid Southern Ocean to north of the Antarctic Polar Front and successfully colonized...

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Main Author: Wilson, Loralee
Other Authors: Cheng-DeVries, Chi-Hing Christina, Fuller, Becky, Catchen, Julian, Tan, Milton
Format: Thesis
Language:English
Published: 2022
Subjects:
Online Access:http://hdl.handle.net/2142/108725
id ftunivillidea:oai:www.ideals.illinois.edu:2142/108725
record_format openpolar
spelling ftunivillidea:oai:www.ideals.illinois.edu:2142/108725 2023-05-15T13:41:09+02:00 Comparative antifreeze trait analyses of Antarctic and temperate sister species pairs shed light on tempo of adaptive trait loss under relaxed selection Wilson, Loralee Cheng-DeVries, Chi-Hing Christina Fuller, Becky Catchen, Julian Tan, Milton 2022-10-07T22:50:13Z application/pdf http://hdl.handle.net/2142/108725 en eng http://hdl.handle.net/2142/108725 Copyright 2020 Loralee Wilson notothenioid antifreeze glycoprotein Antarctic secondarily temperate relaxed selection Harpagifer Champsocephalus Thesis text 2022 ftunivillidea 2020-10-10T22:28:04Z Antarctic notothenioid fishes endemic to the ice-laden, freezing (-1.9°C) Southern Ocean survive by having evolved antifreeze glycoproteins (AFGP). Over evolutionary time several lineages have escaped the isolated frigid Southern Ocean to north of the Antarctic Polar Front and successfully colonized temperate sub-Antarctic waters. This study investigates the predicted reduction or loss of the prior adaptive AFGP trait in select secondarily temperate notothenioid species when selective pressure no longer exists. The magnitude of the change in AFGP trait expression could inform on the evolutionary history of these species since the AFGP gene evolved only once in notothenioids. We determined the evolutionary status of the AFGP trait in the South American notothenioid Harpagifer bispinis and compared it with its Antarctic sister species Harpagifer antarcticus at the genotypic and phenotypic levels. We found the AFGP trait persists at considerable levels in H. bispinis. AFGP coding sequences remained in its DNA and are transcribed and expressed into functional AFGP proteins. We contrasted this AFGP trait status with another sister notothenioid species pair, the S. American icefish Champsocephalus esox and its Antarctic sister C. gunnari. C. esox co-occurs geographically with H. bispinis, and while AFGP coding sequences also persist in its genome, they are not transcribed or expressed into protein. We constructed a time calibrated Bayesian inferred phylogeny and estimated similar divergence times of H. bispinis/H. antarcticus and C. esox/C. gunnari. Thus, the disparate tempo of AFGP trait change in these two species pairs indicates that alteration of a prior adaptive trait must involve other factors in addition to time in the absence of the apparent selective modality. Limited Author requested closed access (OA after 2yrs) in Vireo ETD system Thesis Antarc* Antarctic antarcticus Icefish Southern Ocean University of Illinois at Urbana-Champaign: IDEALS (Illinois Digital Environment for Access to Learning and Scholarship) Antarctic Southern Ocean The Antarctic
institution Open Polar
collection University of Illinois at Urbana-Champaign: IDEALS (Illinois Digital Environment for Access to Learning and Scholarship)
op_collection_id ftunivillidea
language English
topic notothenioid
antifreeze glycoprotein
Antarctic
secondarily temperate
relaxed selection
Harpagifer
Champsocephalus
spellingShingle notothenioid
antifreeze glycoprotein
Antarctic
secondarily temperate
relaxed selection
Harpagifer
Champsocephalus
Wilson, Loralee
Comparative antifreeze trait analyses of Antarctic and temperate sister species pairs shed light on tempo of adaptive trait loss under relaxed selection
topic_facet notothenioid
antifreeze glycoprotein
Antarctic
secondarily temperate
relaxed selection
Harpagifer
Champsocephalus
description Antarctic notothenioid fishes endemic to the ice-laden, freezing (-1.9°C) Southern Ocean survive by having evolved antifreeze glycoproteins (AFGP). Over evolutionary time several lineages have escaped the isolated frigid Southern Ocean to north of the Antarctic Polar Front and successfully colonized temperate sub-Antarctic waters. This study investigates the predicted reduction or loss of the prior adaptive AFGP trait in select secondarily temperate notothenioid species when selective pressure no longer exists. The magnitude of the change in AFGP trait expression could inform on the evolutionary history of these species since the AFGP gene evolved only once in notothenioids. We determined the evolutionary status of the AFGP trait in the South American notothenioid Harpagifer bispinis and compared it with its Antarctic sister species Harpagifer antarcticus at the genotypic and phenotypic levels. We found the AFGP trait persists at considerable levels in H. bispinis. AFGP coding sequences remained in its DNA and are transcribed and expressed into functional AFGP proteins. We contrasted this AFGP trait status with another sister notothenioid species pair, the S. American icefish Champsocephalus esox and its Antarctic sister C. gunnari. C. esox co-occurs geographically with H. bispinis, and while AFGP coding sequences also persist in its genome, they are not transcribed or expressed into protein. We constructed a time calibrated Bayesian inferred phylogeny and estimated similar divergence times of H. bispinis/H. antarcticus and C. esox/C. gunnari. Thus, the disparate tempo of AFGP trait change in these two species pairs indicates that alteration of a prior adaptive trait must involve other factors in addition to time in the absence of the apparent selective modality. Limited Author requested closed access (OA after 2yrs) in Vireo ETD system
author2 Cheng-DeVries, Chi-Hing Christina
Fuller, Becky
Catchen, Julian
Tan, Milton
format Thesis
author Wilson, Loralee
author_facet Wilson, Loralee
author_sort Wilson, Loralee
title Comparative antifreeze trait analyses of Antarctic and temperate sister species pairs shed light on tempo of adaptive trait loss under relaxed selection
title_short Comparative antifreeze trait analyses of Antarctic and temperate sister species pairs shed light on tempo of adaptive trait loss under relaxed selection
title_full Comparative antifreeze trait analyses of Antarctic and temperate sister species pairs shed light on tempo of adaptive trait loss under relaxed selection
title_fullStr Comparative antifreeze trait analyses of Antarctic and temperate sister species pairs shed light on tempo of adaptive trait loss under relaxed selection
title_full_unstemmed Comparative antifreeze trait analyses of Antarctic and temperate sister species pairs shed light on tempo of adaptive trait loss under relaxed selection
title_sort comparative antifreeze trait analyses of antarctic and temperate sister species pairs shed light on tempo of adaptive trait loss under relaxed selection
publishDate 2022
url http://hdl.handle.net/2142/108725
geographic Antarctic
Southern Ocean
The Antarctic
geographic_facet Antarctic
Southern Ocean
The Antarctic
genre Antarc*
Antarctic
antarcticus
Icefish
Southern Ocean
genre_facet Antarc*
Antarctic
antarcticus
Icefish
Southern Ocean
op_relation http://hdl.handle.net/2142/108725
op_rights Copyright 2020 Loralee Wilson
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