Comparative antifreeze trait analyses of Antarctic and temperate sister species pairs shed light on tempo of adaptive trait loss under relaxed selection
Antarctic notothenioid fishes endemic to the ice-laden, freezing (-1.9°C) Southern Ocean survive by having evolved antifreeze glycoproteins (AFGP). Over evolutionary time several lineages have escaped the isolated frigid Southern Ocean to north of the Antarctic Polar Front and successfully colonized...
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ftunivillidea:oai:www.ideals.illinois.edu:2142/108725 2023-05-15T13:41:09+02:00 Comparative antifreeze trait analyses of Antarctic and temperate sister species pairs shed light on tempo of adaptive trait loss under relaxed selection Wilson, Loralee Cheng-DeVries, Chi-Hing Christina Fuller, Becky Catchen, Julian Tan, Milton 2022-10-07T22:50:13Z application/pdf http://hdl.handle.net/2142/108725 en eng http://hdl.handle.net/2142/108725 Copyright 2020 Loralee Wilson notothenioid antifreeze glycoprotein Antarctic secondarily temperate relaxed selection Harpagifer Champsocephalus Thesis text 2022 ftunivillidea 2020-10-10T22:28:04Z Antarctic notothenioid fishes endemic to the ice-laden, freezing (-1.9°C) Southern Ocean survive by having evolved antifreeze glycoproteins (AFGP). Over evolutionary time several lineages have escaped the isolated frigid Southern Ocean to north of the Antarctic Polar Front and successfully colonized temperate sub-Antarctic waters. This study investigates the predicted reduction or loss of the prior adaptive AFGP trait in select secondarily temperate notothenioid species when selective pressure no longer exists. The magnitude of the change in AFGP trait expression could inform on the evolutionary history of these species since the AFGP gene evolved only once in notothenioids. We determined the evolutionary status of the AFGP trait in the South American notothenioid Harpagifer bispinis and compared it with its Antarctic sister species Harpagifer antarcticus at the genotypic and phenotypic levels. We found the AFGP trait persists at considerable levels in H. bispinis. AFGP coding sequences remained in its DNA and are transcribed and expressed into functional AFGP proteins. We contrasted this AFGP trait status with another sister notothenioid species pair, the S. American icefish Champsocephalus esox and its Antarctic sister C. gunnari. C. esox co-occurs geographically with H. bispinis, and while AFGP coding sequences also persist in its genome, they are not transcribed or expressed into protein. We constructed a time calibrated Bayesian inferred phylogeny and estimated similar divergence times of H. bispinis/H. antarcticus and C. esox/C. gunnari. Thus, the disparate tempo of AFGP trait change in these two species pairs indicates that alteration of a prior adaptive trait must involve other factors in addition to time in the absence of the apparent selective modality. Limited Author requested closed access (OA after 2yrs) in Vireo ETD system Thesis Antarc* Antarctic antarcticus Icefish Southern Ocean University of Illinois at Urbana-Champaign: IDEALS (Illinois Digital Environment for Access to Learning and Scholarship) Antarctic Southern Ocean The Antarctic |
institution |
Open Polar |
collection |
University of Illinois at Urbana-Champaign: IDEALS (Illinois Digital Environment for Access to Learning and Scholarship) |
op_collection_id |
ftunivillidea |
language |
English |
topic |
notothenioid antifreeze glycoprotein Antarctic secondarily temperate relaxed selection Harpagifer Champsocephalus |
spellingShingle |
notothenioid antifreeze glycoprotein Antarctic secondarily temperate relaxed selection Harpagifer Champsocephalus Wilson, Loralee Comparative antifreeze trait analyses of Antarctic and temperate sister species pairs shed light on tempo of adaptive trait loss under relaxed selection |
topic_facet |
notothenioid antifreeze glycoprotein Antarctic secondarily temperate relaxed selection Harpagifer Champsocephalus |
description |
Antarctic notothenioid fishes endemic to the ice-laden, freezing (-1.9°C) Southern Ocean survive by having evolved antifreeze glycoproteins (AFGP). Over evolutionary time several lineages have escaped the isolated frigid Southern Ocean to north of the Antarctic Polar Front and successfully colonized temperate sub-Antarctic waters. This study investigates the predicted reduction or loss of the prior adaptive AFGP trait in select secondarily temperate notothenioid species when selective pressure no longer exists. The magnitude of the change in AFGP trait expression could inform on the evolutionary history of these species since the AFGP gene evolved only once in notothenioids. We determined the evolutionary status of the AFGP trait in the South American notothenioid Harpagifer bispinis and compared it with its Antarctic sister species Harpagifer antarcticus at the genotypic and phenotypic levels. We found the AFGP trait persists at considerable levels in H. bispinis. AFGP coding sequences remained in its DNA and are transcribed and expressed into functional AFGP proteins. We contrasted this AFGP trait status with another sister notothenioid species pair, the S. American icefish Champsocephalus esox and its Antarctic sister C. gunnari. C. esox co-occurs geographically with H. bispinis, and while AFGP coding sequences also persist in its genome, they are not transcribed or expressed into protein. We constructed a time calibrated Bayesian inferred phylogeny and estimated similar divergence times of H. bispinis/H. antarcticus and C. esox/C. gunnari. Thus, the disparate tempo of AFGP trait change in these two species pairs indicates that alteration of a prior adaptive trait must involve other factors in addition to time in the absence of the apparent selective modality. Limited Author requested closed access (OA after 2yrs) in Vireo ETD system |
author2 |
Cheng-DeVries, Chi-Hing Christina Fuller, Becky Catchen, Julian Tan, Milton |
format |
Thesis |
author |
Wilson, Loralee |
author_facet |
Wilson, Loralee |
author_sort |
Wilson, Loralee |
title |
Comparative antifreeze trait analyses of Antarctic and temperate sister species pairs shed light on tempo of adaptive trait loss under relaxed selection |
title_short |
Comparative antifreeze trait analyses of Antarctic and temperate sister species pairs shed light on tempo of adaptive trait loss under relaxed selection |
title_full |
Comparative antifreeze trait analyses of Antarctic and temperate sister species pairs shed light on tempo of adaptive trait loss under relaxed selection |
title_fullStr |
Comparative antifreeze trait analyses of Antarctic and temperate sister species pairs shed light on tempo of adaptive trait loss under relaxed selection |
title_full_unstemmed |
Comparative antifreeze trait analyses of Antarctic and temperate sister species pairs shed light on tempo of adaptive trait loss under relaxed selection |
title_sort |
comparative antifreeze trait analyses of antarctic and temperate sister species pairs shed light on tempo of adaptive trait loss under relaxed selection |
publishDate |
2022 |
url |
http://hdl.handle.net/2142/108725 |
geographic |
Antarctic Southern Ocean The Antarctic |
geographic_facet |
Antarctic Southern Ocean The Antarctic |
genre |
Antarc* Antarctic antarcticus Icefish Southern Ocean |
genre_facet |
Antarc* Antarctic antarcticus Icefish Southern Ocean |
op_relation |
http://hdl.handle.net/2142/108725 |
op_rights |
Copyright 2020 Loralee Wilson |
_version_ |
1766146227544522752 |