Biogeography, Diversification, and Domestication in the Coca Family (Erythroxylaceae)

The Coca family (Erythroxylaceae) is most infamously known as the natural source of cocaine, isolated from four South American taxa called coca, but it also comprises ca. 283 more species of trees and shrubs distributed in tropical habitats throughout the world. This study has two major foci: First,...

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Bibliographic Details
Main Author: White, Dawson M
Other Authors: Mason-Gamer, Roberta J, Igic, Boris, Ashley, Mary, Zerega, Nyree, Ree, Richard
Format: Thesis
Language:unknown
Published: 2019
Subjects:
Online Access:http://hdl.handle.net/10027/23654
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spelling ftunivillchic:oai:dspace-prod.lib.uic.edu:10027/23654 2023-05-15T17:36:33+02:00 Biogeography, Diversification, and Domestication in the Coca Family (Erythroxylaceae) White, Dawson M Mason-Gamer, Roberta J Igic, Boris Ashley, Mary Zerega, Nyree Ree, Richard Mason-Gamer, Roberta J May 2019 application/pdf http://hdl.handle.net/10027/23654 unknown Malpighiales systematics museum genomics Neotropics Paleotropics phytogeography biome shifts niche evolution plant domestication Thesis text 2019 ftunivillchic 2019-09-20T22:06:43Z The Coca family (Erythroxylaceae) is most infamously known as the natural source of cocaine, isolated from four South American taxa called coca, but it also comprises ca. 283 more species of trees and shrubs distributed in tropical habitats throughout the world. This study has two major foci: First, a population-level analysis of diversity and ancestry of the cultivated cocas and their closest relatives has revealed a hypothesis that coca has been domesticated from the wild species, Erythroxylum gracilipes, two or three times. This supports a paradigm that different Holocene peoples were able to breed the same natural resource into domestication to serve their needs; in this case, a mild workaday stimulant and medicine. The second focus describes the biogeography and patterns of diversification of the Coca family as it evolved and migrated around the tropical regions of the world. The study finds that the clade originated in Africa in the late Cretaceous before migrating into the Indo-Pacific region as well as the Americas. The timing of this migration out of Africa appears to have occurred ~50 Ma and dispersal into the Americas might have been facilitated by a north Atlantic land bridge in combination with the warm climates of the early Eocene climatic optimum. We also find evidence for a diversification rate increase at the origin of the Erythroxylum lineage concurrent with its global migration, followed by a universal slowdown. However, we point to the influence of fossil calibrations and possibly sequencing and alignment artifacts in shaping the tree and thus dictating this chronology. The thesis also describes patterns of biome evolution during the diversification of the Coca family; highlighting that the rainforest biome is home to about half of all Erythroxylaceae species and that rainforest lineages have frequently transitioned into other biomes (dry forest and savanna/grassland). Finally, the thesis includes the description of a new variety of Erythroxylum collected by the Field Museum of Natural History’s Rapid Inventory team from the Sierra Escalera of Peru. Thesis North Atlantic University of Illinois at Chicago: UIC INDIGO (INtellectual property in DIGital form available online in an Open environment) Pacific
institution Open Polar
collection University of Illinois at Chicago: UIC INDIGO (INtellectual property in DIGital form available online in an Open environment)
op_collection_id ftunivillchic
language unknown
topic Malpighiales
systematics
museum genomics
Neotropics
Paleotropics
phytogeography
biome shifts
niche evolution
plant domestication
spellingShingle Malpighiales
systematics
museum genomics
Neotropics
Paleotropics
phytogeography
biome shifts
niche evolution
plant domestication
White, Dawson M
Biogeography, Diversification, and Domestication in the Coca Family (Erythroxylaceae)
topic_facet Malpighiales
systematics
museum genomics
Neotropics
Paleotropics
phytogeography
biome shifts
niche evolution
plant domestication
description The Coca family (Erythroxylaceae) is most infamously known as the natural source of cocaine, isolated from four South American taxa called coca, but it also comprises ca. 283 more species of trees and shrubs distributed in tropical habitats throughout the world. This study has two major foci: First, a population-level analysis of diversity and ancestry of the cultivated cocas and their closest relatives has revealed a hypothesis that coca has been domesticated from the wild species, Erythroxylum gracilipes, two or three times. This supports a paradigm that different Holocene peoples were able to breed the same natural resource into domestication to serve their needs; in this case, a mild workaday stimulant and medicine. The second focus describes the biogeography and patterns of diversification of the Coca family as it evolved and migrated around the tropical regions of the world. The study finds that the clade originated in Africa in the late Cretaceous before migrating into the Indo-Pacific region as well as the Americas. The timing of this migration out of Africa appears to have occurred ~50 Ma and dispersal into the Americas might have been facilitated by a north Atlantic land bridge in combination with the warm climates of the early Eocene climatic optimum. We also find evidence for a diversification rate increase at the origin of the Erythroxylum lineage concurrent with its global migration, followed by a universal slowdown. However, we point to the influence of fossil calibrations and possibly sequencing and alignment artifacts in shaping the tree and thus dictating this chronology. The thesis also describes patterns of biome evolution during the diversification of the Coca family; highlighting that the rainforest biome is home to about half of all Erythroxylaceae species and that rainforest lineages have frequently transitioned into other biomes (dry forest and savanna/grassland). Finally, the thesis includes the description of a new variety of Erythroxylum collected by the Field Museum of Natural History’s Rapid Inventory team from the Sierra Escalera of Peru.
author2 Mason-Gamer, Roberta J
Igic, Boris
Ashley, Mary
Zerega, Nyree
Ree, Richard
Mason-Gamer, Roberta J
format Thesis
author White, Dawson M
author_facet White, Dawson M
author_sort White, Dawson M
title Biogeography, Diversification, and Domestication in the Coca Family (Erythroxylaceae)
title_short Biogeography, Diversification, and Domestication in the Coca Family (Erythroxylaceae)
title_full Biogeography, Diversification, and Domestication in the Coca Family (Erythroxylaceae)
title_fullStr Biogeography, Diversification, and Domestication in the Coca Family (Erythroxylaceae)
title_full_unstemmed Biogeography, Diversification, and Domestication in the Coca Family (Erythroxylaceae)
title_sort biogeography, diversification, and domestication in the coca family (erythroxylaceae)
publishDate 2019
url http://hdl.handle.net/10027/23654
geographic Pacific
geographic_facet Pacific
genre North Atlantic
genre_facet North Atlantic
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