Combining population genomics and ecological niche modeling to assess taxon limits between Carex jemtlandica and C. lepidocarpa

Carex section Ceratocystis (Cyperaceae) is a group of recently evolved plant species, in which hybridization is frequent, introgression is documented, taxonomy is complex, and morphological boundaries are vague. Within this section, a unified taxonomic treatment of the Carex jemtlandica-Carex lepido...

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Published in:Journal of Systematics and Evolution
Main Authors: Nygaard, Malene, Kemppainen, Petri, Speed, James D. M., Elven, Reidar, Flatberg, Kjell Ivar, Galten, Leif P., Yousefi, Narjes, Solstad, Heidi, Bendiksby, Mika
Other Authors: Organismal and Evolutionary Biology Research Programme, Ecological Genetics Research Unit
Format: Article in Journal/Newspaper
Language:English
Published: Kexue Chubanshe 2021
Subjects:
Online Access:http://hdl.handle.net/10138/333226
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spelling ftunivhelsihelda:oai:helda.helsinki.fi:10138/333226 2024-01-07T09:43:10+01:00 Combining population genomics and ecological niche modeling to assess taxon limits between Carex jemtlandica and C. lepidocarpa Nygaard, Malene Kemppainen, Petri Speed, James D. M. Elven, Reidar Flatberg, Kjell Ivar Galten, Leif P. Yousefi, Narjes Solstad, Heidi Bendiksby, Mika Organismal and Evolutionary Biology Research Programme Ecological Genetics Research Unit 2021-08-17T06:01:01Z 15 application/pdf http://hdl.handle.net/10138/333226 eng eng Kexue Chubanshe 10.1111/jse.12743 Nygaard , M , Kemppainen , P , Speed , J D M , Elven , R , Flatberg , K I , Galten , L P , Yousefi , N , Solstad , H & Bendiksby , M 2021 , ' Combining population genomics and ecological niche modeling to assess taxon limits between Carex jemtlandica and C. lepidocarpa ' , Journal of Systematics and Evolution , vol. 59 , no. 4 , pp. 627-641 . https://doi.org/10.1111/jse.12743 e56786e2-b5a2-4ba6-8f1a-62917f59c2df http://hdl.handle.net/10138/333226 000674403000003 cc_by openAccess info:eu-repo/semantics/openAccess Cyperaceae ecological niche modelling natural hybridization population genetics RAD sequencing species delineation taxonomy FLAVA COMPLEX CYPERACEAE SPECIES CONCEPTS DIFFERENTIATION CONSERVATION GENETICS EVOLUTION ALLOZYME SPACE 1181 Ecology evolutionary biology 11831 Plant biology Article publishedVersion 2021 ftunivhelsihelda 2023-12-14T00:10:05Z Carex section Ceratocystis (Cyperaceae) is a group of recently evolved plant species, in which hybridization is frequent, introgression is documented, taxonomy is complex, and morphological boundaries are vague. Within this section, a unified taxonomic treatment of the Carex jemtlandica-Carex lepidocarpa species complex does not exist, and Norway may currently be the sole country accepting species rank for both. Carex jemtlandica is mainly confined to Fennoscandia and is thus a Fennoscandian conservation responsibility. This motivated us to test the principal hypothesis that both C. jemtlandica and C. lepidocarpa represent evolutionary significant units, and that both deserve their current recognition at species level. We investigated their evolutionary distinctiveness in Norway, using restriction site-associated DNA sequencing and ecological niche modeling. Our genomic results reveal two genetic clusters, largely corresponding to C. jemtlandica and C. lepidocarpa that also remain distinct in sympatry, despite clear indications of ongoing hybridization and introgression. The ecological niche modeling suggests that they occupy different environmental niches. Jointly, our results clearly show that C. jemtlandica and C. lepidocarpa represent separately evolving entities that should qualify recognition as evolutionary significant units. Given the high level of introgression compared to other hybridizing species pairs in Carex we recommend treating C. jemtlandica as a subspecies of C. lepidocarpa. Peer reviewed Article in Journal/Newspaper Fennoscandia Fennoscandian HELDA – University of Helsinki Open Repository Norway Journal of Systematics and Evolution 59 4 627 641
institution Open Polar
collection HELDA – University of Helsinki Open Repository
op_collection_id ftunivhelsihelda
language English
topic Cyperaceae
ecological niche modelling
natural hybridization
population genetics
RAD sequencing
species delineation
taxonomy
FLAVA COMPLEX CYPERACEAE
SPECIES CONCEPTS
DIFFERENTIATION
CONSERVATION
GENETICS
EVOLUTION
ALLOZYME
SPACE
1181 Ecology
evolutionary biology
11831 Plant biology
spellingShingle Cyperaceae
ecological niche modelling
natural hybridization
population genetics
RAD sequencing
species delineation
taxonomy
FLAVA COMPLEX CYPERACEAE
SPECIES CONCEPTS
DIFFERENTIATION
CONSERVATION
GENETICS
EVOLUTION
ALLOZYME
SPACE
1181 Ecology
evolutionary biology
11831 Plant biology
Nygaard, Malene
Kemppainen, Petri
Speed, James D. M.
Elven, Reidar
Flatberg, Kjell Ivar
Galten, Leif P.
Yousefi, Narjes
Solstad, Heidi
Bendiksby, Mika
Combining population genomics and ecological niche modeling to assess taxon limits between Carex jemtlandica and C. lepidocarpa
topic_facet Cyperaceae
ecological niche modelling
natural hybridization
population genetics
RAD sequencing
species delineation
taxonomy
FLAVA COMPLEX CYPERACEAE
SPECIES CONCEPTS
DIFFERENTIATION
CONSERVATION
GENETICS
EVOLUTION
ALLOZYME
SPACE
1181 Ecology
evolutionary biology
11831 Plant biology
description Carex section Ceratocystis (Cyperaceae) is a group of recently evolved plant species, in which hybridization is frequent, introgression is documented, taxonomy is complex, and morphological boundaries are vague. Within this section, a unified taxonomic treatment of the Carex jemtlandica-Carex lepidocarpa species complex does not exist, and Norway may currently be the sole country accepting species rank for both. Carex jemtlandica is mainly confined to Fennoscandia and is thus a Fennoscandian conservation responsibility. This motivated us to test the principal hypothesis that both C. jemtlandica and C. lepidocarpa represent evolutionary significant units, and that both deserve their current recognition at species level. We investigated their evolutionary distinctiveness in Norway, using restriction site-associated DNA sequencing and ecological niche modeling. Our genomic results reveal two genetic clusters, largely corresponding to C. jemtlandica and C. lepidocarpa that also remain distinct in sympatry, despite clear indications of ongoing hybridization and introgression. The ecological niche modeling suggests that they occupy different environmental niches. Jointly, our results clearly show that C. jemtlandica and C. lepidocarpa represent separately evolving entities that should qualify recognition as evolutionary significant units. Given the high level of introgression compared to other hybridizing species pairs in Carex we recommend treating C. jemtlandica as a subspecies of C. lepidocarpa. Peer reviewed
author2 Organismal and Evolutionary Biology Research Programme
Ecological Genetics Research Unit
format Article in Journal/Newspaper
author Nygaard, Malene
Kemppainen, Petri
Speed, James D. M.
Elven, Reidar
Flatberg, Kjell Ivar
Galten, Leif P.
Yousefi, Narjes
Solstad, Heidi
Bendiksby, Mika
author_facet Nygaard, Malene
Kemppainen, Petri
Speed, James D. M.
Elven, Reidar
Flatberg, Kjell Ivar
Galten, Leif P.
Yousefi, Narjes
Solstad, Heidi
Bendiksby, Mika
author_sort Nygaard, Malene
title Combining population genomics and ecological niche modeling to assess taxon limits between Carex jemtlandica and C. lepidocarpa
title_short Combining population genomics and ecological niche modeling to assess taxon limits between Carex jemtlandica and C. lepidocarpa
title_full Combining population genomics and ecological niche modeling to assess taxon limits between Carex jemtlandica and C. lepidocarpa
title_fullStr Combining population genomics and ecological niche modeling to assess taxon limits between Carex jemtlandica and C. lepidocarpa
title_full_unstemmed Combining population genomics and ecological niche modeling to assess taxon limits between Carex jemtlandica and C. lepidocarpa
title_sort combining population genomics and ecological niche modeling to assess taxon limits between carex jemtlandica and c. lepidocarpa
publisher Kexue Chubanshe
publishDate 2021
url http://hdl.handle.net/10138/333226
geographic Norway
geographic_facet Norway
genre Fennoscandia
Fennoscandian
genre_facet Fennoscandia
Fennoscandian
op_relation 10.1111/jse.12743
Nygaard , M , Kemppainen , P , Speed , J D M , Elven , R , Flatberg , K I , Galten , L P , Yousefi , N , Solstad , H & Bendiksby , M 2021 , ' Combining population genomics and ecological niche modeling to assess taxon limits between Carex jemtlandica and C. lepidocarpa ' , Journal of Systematics and Evolution , vol. 59 , no. 4 , pp. 627-641 . https://doi.org/10.1111/jse.12743
e56786e2-b5a2-4ba6-8f1a-62917f59c2df
http://hdl.handle.net/10138/333226
000674403000003
op_rights cc_by
openAccess
info:eu-repo/semantics/openAccess
container_title Journal of Systematics and Evolution
container_volume 59
container_issue 4
container_start_page 627
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