FragSAD : A database of diversity and species abundance distributions from habitat fragments

Habitat destruction is the single greatest anthropogenic threat to biodiversity. Decades of research on this issue have led to the accumulation of hundreds of data sets comparing species assemblages in larger, intact, habitats to smaller, more fragmented, habitats. Despite this, little synthesis or...

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Published in:Ecology
Main Authors: Chase, Jonathan M., Liebergesell, Mario, Sagouis, Alban, May, Felix, Blowes, Shane A., Berg, Ake, Bernard, Enrico, Brosi, Berry J., Cadotte, Marc W., Cayuela, Luis, Chiarello, Adriano G., Cosson, Jean-Francois, Cresswell, Will, Dami, Filibus Danjuma, Dauber, Jens, Dickman, Chris R., Didham, Raphael K., Edwards, David P., Farneda, Fabio Z., Gavish, Yoni, Goncalves-Souza, Thiago, Guadagnin, Demetrio Luis, Henry, Mickael, Lopez-Baucells, Adria, Kappes, Heike, Mac Nally, Ralph, Manu, Shiiwua, Martensen, Alexandre Camargo, McCollin, Duncan, Meyer, Christoph F. J., Neckel-Oliveira, Selvino, Nogueira, Andre, Pons, Jean-Marc, Raheem, Dinarzarde C., Ramos, Flavio Nunes, Rocha, Ricardo, Sam, Katerina, Slade, Eleanor, Stireman, John O., Struebig, Matthew J., Vasconcelos, Heraldo, Ziv, Yaron
Other Authors: Helsinki Institute of Sustainability Science (HELSUS), Ecosystems and Environment Research Programme
Format: Article in Journal/Newspaper
Language:English
Published: John Wiley & Sons, Ltd 2020
Subjects:
Online Access:http://hdl.handle.net/10138/322637
id ftunivhelsihelda:oai:helda.helsinki.fi:10138/322637
record_format openpolar
institution Open Polar
collection HELDA – University of Helsinki Open Repository
op_collection_id ftunivhelsihelda
language English
topic disturbance
habitat fragmentation
habitat loss
species abundance distribution
species-area relationship
species richness
1181 Ecology
evolutionary biology
spellingShingle disturbance
habitat fragmentation
habitat loss
species abundance distribution
species-area relationship
species richness
1181 Ecology
evolutionary biology
Chase, Jonathan M.
Liebergesell, Mario
Sagouis, Alban
May, Felix
Blowes, Shane A.
Berg, Ake
Bernard, Enrico
Brosi, Berry J.
Cadotte, Marc W.
Cayuela, Luis
Chiarello, Adriano G.
Cosson, Jean-Francois
Cresswell, Will
Dami, Filibus Danjuma
Dauber, Jens
Dickman, Chris R.
Didham, Raphael K.
Edwards, David P.
Farneda, Fabio Z.
Gavish, Yoni
Goncalves-Souza, Thiago
Guadagnin, Demetrio Luis
Henry, Mickael
Lopez-Baucells, Adria
Kappes, Heike
Mac Nally, Ralph
Manu, Shiiwua
Martensen, Alexandre Camargo
McCollin, Duncan
Meyer, Christoph F. J.
Neckel-Oliveira, Selvino
Nogueira, Andre
Pons, Jean-Marc
Raheem, Dinarzarde C.
Ramos, Flavio Nunes
Rocha, Ricardo
Sam, Katerina
Slade, Eleanor
Stireman, John O.
Struebig, Matthew J.
Vasconcelos, Heraldo
Ziv, Yaron
FragSAD : A database of diversity and species abundance distributions from habitat fragments
topic_facet disturbance
habitat fragmentation
habitat loss
species abundance distribution
species-area relationship
species richness
1181 Ecology
evolutionary biology
description Habitat destruction is the single greatest anthropogenic threat to biodiversity. Decades of research on this issue have led to the accumulation of hundreds of data sets comparing species assemblages in larger, intact, habitats to smaller, more fragmented, habitats. Despite this, little synthesis or consensus has been achieved, primarily because of non-standardized sampling methodology and analyses of notoriously scale-dependent response variables (i.e., species richness). To be able to compare and contrast the results of habitat fragmentation on species' assemblages, it is necessary to have the underlying data on species abundances and sampling intensity, so that standardization can be achieved. To accomplish this, we systematically searched the literature for studies where abundances of species in assemblages (of any taxa) were sampled from many habitat patches that varied in size. From these, we extracted data from several studies, and contacted authors of studies where appropriate data were collected but not published, giving us 117 studies that compared species assemblages among habitat fragments that varied in area. Less than one-half (41) of studies came from tropical forests of Central and South America, but there were many studies from temperate forests and grasslands from all continents except Antarctica. Fifty-four of the studies were on invertebrates (mostly insects), but there were several studies on plants (15), birds (16), mammals (19), and reptiles and amphibians (13). We also collected qualitative information on the length of time since fragmentation. With data on total and relative abundances (and identities) of species, sampling effort, and affiliated meta-data about the study sites, these data can be used to more definitively test hypotheses about the role of habitat fragmentation in altering patterns of biodiversity. There are no copyright restrictions. Please cite this data paper and the associated Dryad data set if the data are used in publications. Peer reviewed
author2 Helsinki Institute of Sustainability Science (HELSUS)
Ecosystems and Environment Research Programme
format Article in Journal/Newspaper
author Chase, Jonathan M.
Liebergesell, Mario
Sagouis, Alban
May, Felix
Blowes, Shane A.
Berg, Ake
Bernard, Enrico
Brosi, Berry J.
Cadotte, Marc W.
Cayuela, Luis
Chiarello, Adriano G.
Cosson, Jean-Francois
Cresswell, Will
Dami, Filibus Danjuma
Dauber, Jens
Dickman, Chris R.
Didham, Raphael K.
Edwards, David P.
Farneda, Fabio Z.
Gavish, Yoni
Goncalves-Souza, Thiago
Guadagnin, Demetrio Luis
Henry, Mickael
Lopez-Baucells, Adria
Kappes, Heike
Mac Nally, Ralph
Manu, Shiiwua
Martensen, Alexandre Camargo
McCollin, Duncan
Meyer, Christoph F. J.
Neckel-Oliveira, Selvino
Nogueira, Andre
Pons, Jean-Marc
Raheem, Dinarzarde C.
Ramos, Flavio Nunes
Rocha, Ricardo
Sam, Katerina
Slade, Eleanor
Stireman, John O.
Struebig, Matthew J.
Vasconcelos, Heraldo
Ziv, Yaron
author_facet Chase, Jonathan M.
Liebergesell, Mario
Sagouis, Alban
May, Felix
Blowes, Shane A.
Berg, Ake
Bernard, Enrico
Brosi, Berry J.
Cadotte, Marc W.
Cayuela, Luis
Chiarello, Adriano G.
Cosson, Jean-Francois
Cresswell, Will
Dami, Filibus Danjuma
Dauber, Jens
Dickman, Chris R.
Didham, Raphael K.
Edwards, David P.
Farneda, Fabio Z.
Gavish, Yoni
Goncalves-Souza, Thiago
Guadagnin, Demetrio Luis
Henry, Mickael
Lopez-Baucells, Adria
Kappes, Heike
Mac Nally, Ralph
Manu, Shiiwua
Martensen, Alexandre Camargo
McCollin, Duncan
Meyer, Christoph F. J.
Neckel-Oliveira, Selvino
Nogueira, Andre
Pons, Jean-Marc
Raheem, Dinarzarde C.
Ramos, Flavio Nunes
Rocha, Ricardo
Sam, Katerina
Slade, Eleanor
Stireman, John O.
Struebig, Matthew J.
Vasconcelos, Heraldo
Ziv, Yaron
author_sort Chase, Jonathan M.
title FragSAD : A database of diversity and species abundance distributions from habitat fragments
title_short FragSAD : A database of diversity and species abundance distributions from habitat fragments
title_full FragSAD : A database of diversity and species abundance distributions from habitat fragments
title_fullStr FragSAD : A database of diversity and species abundance distributions from habitat fragments
title_full_unstemmed FragSAD : A database of diversity and species abundance distributions from habitat fragments
title_sort fragsad : a database of diversity and species abundance distributions from habitat fragments
publisher John Wiley & Sons, Ltd
publishDate 2020
url http://hdl.handle.net/10138/322637
genre Antarc*
Antarctica
genre_facet Antarc*
Antarctica
op_relation 10.1002/ecy.2861
Chase , J M , Liebergesell , M , Sagouis , A , May , F , Blowes , S A , Berg , A , Bernard , E , Brosi , B J , Cadotte , M W , Cayuela , L , Chiarello , A G , Cosson , J-F , Cresswell , W , Dami , F D , Dauber , J , Dickman , C R , Didham , R K , Edwards , D P , Farneda , F Z , Gavish , Y , Goncalves-Souza , T , Guadagnin , D L , Henry , M , Lopez-Baucells , A , Kappes , H , Mac Nally , R , Manu , S , Martensen , A C , McCollin , D , Meyer , C F J , Neckel-Oliveira , S , Nogueira , A , Pons , J-M , Raheem , D C , Ramos , F N , Rocha , R , Sam , K , Slade , E , Stireman , J O , Struebig , M J , Vasconcelos , H & Ziv , Y 2019 , ' FragSAD : A database of diversity and species abundance distributions from habitat fragments ' , Ecology , vol. 100 , no. 12 . https://doi.org/10.1002/ecy.2861
f2c4b664-cbb5-4c42-b596-49851c944b9a
http://hdl.handle.net/10138/322637
000488690700001
op_rights openAccess
info:eu-repo/semantics/openAccess
container_title Ecology
container_volume 100
container_issue 12
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spelling ftunivhelsihelda:oai:helda.helsinki.fi:10138/322637 2024-01-07T09:39:42+01:00 FragSAD : A database of diversity and species abundance distributions from habitat fragments Chase, Jonathan M. Liebergesell, Mario Sagouis, Alban May, Felix Blowes, Shane A. Berg, Ake Bernard, Enrico Brosi, Berry J. Cadotte, Marc W. Cayuela, Luis Chiarello, Adriano G. Cosson, Jean-Francois Cresswell, Will Dami, Filibus Danjuma Dauber, Jens Dickman, Chris R. Didham, Raphael K. Edwards, David P. Farneda, Fabio Z. Gavish, Yoni Goncalves-Souza, Thiago Guadagnin, Demetrio Luis Henry, Mickael Lopez-Baucells, Adria Kappes, Heike Mac Nally, Ralph Manu, Shiiwua Martensen, Alexandre Camargo McCollin, Duncan Meyer, Christoph F. J. Neckel-Oliveira, Selvino Nogueira, Andre Pons, Jean-Marc Raheem, Dinarzarde C. Ramos, Flavio Nunes Rocha, Ricardo Sam, Katerina Slade, Eleanor Stireman, John O. Struebig, Matthew J. Vasconcelos, Heraldo Ziv, Yaron Helsinki Institute of Sustainability Science (HELSUS) Ecosystems and Environment Research Programme 2020-12-10T06:13:09Z 1 application/pdf http://hdl.handle.net/10138/322637 eng eng John Wiley & Sons, Ltd 10.1002/ecy.2861 Chase , J M , Liebergesell , M , Sagouis , A , May , F , Blowes , S A , Berg , A , Bernard , E , Brosi , B J , Cadotte , M W , Cayuela , L , Chiarello , A G , Cosson , J-F , Cresswell , W , Dami , F D , Dauber , J , Dickman , C R , Didham , R K , Edwards , D P , Farneda , F Z , Gavish , Y , Goncalves-Souza , T , Guadagnin , D L , Henry , M , Lopez-Baucells , A , Kappes , H , Mac Nally , R , Manu , S , Martensen , A C , McCollin , D , Meyer , C F J , Neckel-Oliveira , S , Nogueira , A , Pons , J-M , Raheem , D C , Ramos , F N , Rocha , R , Sam , K , Slade , E , Stireman , J O , Struebig , M J , Vasconcelos , H & Ziv , Y 2019 , ' FragSAD : A database of diversity and species abundance distributions from habitat fragments ' , Ecology , vol. 100 , no. 12 . https://doi.org/10.1002/ecy.2861 f2c4b664-cbb5-4c42-b596-49851c944b9a http://hdl.handle.net/10138/322637 000488690700001 openAccess info:eu-repo/semantics/openAccess disturbance habitat fragmentation habitat loss species abundance distribution species-area relationship species richness 1181 Ecology evolutionary biology Article publishedVersion 2020 ftunivhelsihelda 2023-12-14T00:15:38Z Habitat destruction is the single greatest anthropogenic threat to biodiversity. Decades of research on this issue have led to the accumulation of hundreds of data sets comparing species assemblages in larger, intact, habitats to smaller, more fragmented, habitats. Despite this, little synthesis or consensus has been achieved, primarily because of non-standardized sampling methodology and analyses of notoriously scale-dependent response variables (i.e., species richness). To be able to compare and contrast the results of habitat fragmentation on species' assemblages, it is necessary to have the underlying data on species abundances and sampling intensity, so that standardization can be achieved. To accomplish this, we systematically searched the literature for studies where abundances of species in assemblages (of any taxa) were sampled from many habitat patches that varied in size. From these, we extracted data from several studies, and contacted authors of studies where appropriate data were collected but not published, giving us 117 studies that compared species assemblages among habitat fragments that varied in area. Less than one-half (41) of studies came from tropical forests of Central and South America, but there were many studies from temperate forests and grasslands from all continents except Antarctica. Fifty-four of the studies were on invertebrates (mostly insects), but there were several studies on plants (15), birds (16), mammals (19), and reptiles and amphibians (13). We also collected qualitative information on the length of time since fragmentation. With data on total and relative abundances (and identities) of species, sampling effort, and affiliated meta-data about the study sites, these data can be used to more definitively test hypotheses about the role of habitat fragmentation in altering patterns of biodiversity. There are no copyright restrictions. Please cite this data paper and the associated Dryad data set if the data are used in publications. Peer reviewed Article in Journal/Newspaper Antarc* Antarctica HELDA – University of Helsinki Open Repository Ecology 100 12