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spelling ftunivhelsihelda:oai:helda.helsinki.fi:10138/300595 2024-01-07T09:39:38+01:00 The first known virus isolates from Antarctic sea ice have complex infection patterns Luhtanen, Anne-Mari Eronen-Rasimus, Eeva Liisa Oksanen, Hanna Maarit Tison, Jean-Louis Delille, Bruno Dieckmann, Gerhard S Rintala, Janne-Markus Bamford, Dennis Henry Biosciences Elina Roine / Principal Investigator Structure of the Viral Universe Molecular and Integrative Biosciences Research Programme Tvärminne Zoological Station Molecular Principles of Viruses Environmental Sciences Aerovirology Research Group 2019-03-31T21:50:14Z 15 application/pdf http://hdl.handle.net/10138/300595 eng eng Oxford University Press 10.1093/femsec/fiy028 Luhtanen , A-M , Eronen-Rasimus , E L , Oksanen , H M , Tison , J-L , Delille , B , Dieckmann , G S , Rintala , J-M & Bamford , D H 2018 , ' The first known virus isolates from Antarctic sea ice have complex infection patterns ' , FEMS Microbiology Ecology , vol. 94 , no. 4 , 028 . https://doi.org/10.1093/femsec/fiy028 ORCID: /0000-0002-6438-8118/work/53824987 ORCID: /0000-0003-3047-8294/work/53828131 85043791422 732e6858-8396-411f-a477-982c3322cbd2 http://hdl.handle.net/10138/300595 000429481200008 openAccess info:eu-repo/semantics/openAccess 1183 Plant biology microbiology virology 1181 Ecology evolutionary biology virus-host interactions virus isolation sea ice microbiology VLP in sea ice BACTERIAL-GROWTH RATE PHAGE-HOST SYSTEMS MARINE-BACTERIA SOUTHERN-OCEAN PACK ICE PSYCHROPHILIC BACTERIA PHYLOGENETIC ANALYSES PROKARYOTIC VIRUSES VIRAL ABUNDANCE WEDDELL SEA Article acceptedVersion 2019 ftunivhelsihelda 2023-12-14T00:06:58Z Viruses are recognized as important actors in ocean ecology and biogeochemical cycles, but many details are not yet understood. We participated in a winter expedition to the Weddell Sea, Antarctica, to isolate viruses and to measure virus-like particle abundance (flow cytometry) in sea ice. We isolated 59 bacterial strains and the first four Antarctic sea-ice viruses known (PANV1, PANV2, OANV1 and OANV2), which grow in bacterial hosts belonging to the typical sea-ice genera Paraglaciecola and Octadecabacter. The viruses were specific for bacteria at the strain level, although OANV1 was able to infect strains from two different classes. Both PANV1 and PANV2 infected 11/15 isolated Paraglaciecola strains that had almost identical 16S rRNA gene sequences, but the plating efficiencies differed among the strains, whereas OANV1 infected 3/7 Octadecabacter and 1/15 Paraglaciecola strains and OANV2 1/7 Octadecabacter strains. All the phages were cold-active and able to infect their original host at 0 degrees C and 4 degrees C, but not at higher temperatures. The results showed that virus-host interactions can be very complex and that the viral community can also be dynamic in the winter-sea ice. Peer reviewed Article in Journal/Newspaper Antarc* Antarctic Antarctica Sea ice Southern Ocean Weddell Sea HELDA – University of Helsinki Open Repository Antarctic Southern Ocean Weddell Sea Weddell FEMS Microbiology Ecology 94 4
institution Open Polar
collection HELDA – University of Helsinki Open Repository
op_collection_id ftunivhelsihelda
language English
topic 1183 Plant biology
microbiology
virology
1181 Ecology
evolutionary biology
virus-host interactions
virus isolation
sea ice microbiology
VLP in sea ice
BACTERIAL-GROWTH RATE
PHAGE-HOST SYSTEMS
MARINE-BACTERIA
SOUTHERN-OCEAN
PACK ICE
PSYCHROPHILIC BACTERIA
PHYLOGENETIC ANALYSES
PROKARYOTIC VIRUSES
VIRAL ABUNDANCE
WEDDELL SEA
spellingShingle 1183 Plant biology
microbiology
virology
1181 Ecology
evolutionary biology
virus-host interactions
virus isolation
sea ice microbiology
VLP in sea ice
BACTERIAL-GROWTH RATE
PHAGE-HOST SYSTEMS
MARINE-BACTERIA
SOUTHERN-OCEAN
PACK ICE
PSYCHROPHILIC BACTERIA
PHYLOGENETIC ANALYSES
PROKARYOTIC VIRUSES
VIRAL ABUNDANCE
WEDDELL SEA
Luhtanen, Anne-Mari
Eronen-Rasimus, Eeva Liisa
Oksanen, Hanna Maarit
Tison, Jean-Louis
Delille, Bruno
Dieckmann, Gerhard S
Rintala, Janne-Markus
Bamford, Dennis Henry
The first known virus isolates from Antarctic sea ice have complex infection patterns
topic_facet 1183 Plant biology
microbiology
virology
1181 Ecology
evolutionary biology
virus-host interactions
virus isolation
sea ice microbiology
VLP in sea ice
BACTERIAL-GROWTH RATE
PHAGE-HOST SYSTEMS
MARINE-BACTERIA
SOUTHERN-OCEAN
PACK ICE
PSYCHROPHILIC BACTERIA
PHYLOGENETIC ANALYSES
PROKARYOTIC VIRUSES
VIRAL ABUNDANCE
WEDDELL SEA
description Viruses are recognized as important actors in ocean ecology and biogeochemical cycles, but many details are not yet understood. We participated in a winter expedition to the Weddell Sea, Antarctica, to isolate viruses and to measure virus-like particle abundance (flow cytometry) in sea ice. We isolated 59 bacterial strains and the first four Antarctic sea-ice viruses known (PANV1, PANV2, OANV1 and OANV2), which grow in bacterial hosts belonging to the typical sea-ice genera Paraglaciecola and Octadecabacter. The viruses were specific for bacteria at the strain level, although OANV1 was able to infect strains from two different classes. Both PANV1 and PANV2 infected 11/15 isolated Paraglaciecola strains that had almost identical 16S rRNA gene sequences, but the plating efficiencies differed among the strains, whereas OANV1 infected 3/7 Octadecabacter and 1/15 Paraglaciecola strains and OANV2 1/7 Octadecabacter strains. All the phages were cold-active and able to infect their original host at 0 degrees C and 4 degrees C, but not at higher temperatures. The results showed that virus-host interactions can be very complex and that the viral community can also be dynamic in the winter-sea ice. Peer reviewed
author2 Biosciences
Elina Roine / Principal Investigator
Structure of the Viral Universe
Molecular and Integrative Biosciences Research Programme
Tvärminne Zoological Station
Molecular Principles of Viruses
Environmental Sciences
Aerovirology Research Group
format Article in Journal/Newspaper
author Luhtanen, Anne-Mari
Eronen-Rasimus, Eeva Liisa
Oksanen, Hanna Maarit
Tison, Jean-Louis
Delille, Bruno
Dieckmann, Gerhard S
Rintala, Janne-Markus
Bamford, Dennis Henry
author_facet Luhtanen, Anne-Mari
Eronen-Rasimus, Eeva Liisa
Oksanen, Hanna Maarit
Tison, Jean-Louis
Delille, Bruno
Dieckmann, Gerhard S
Rintala, Janne-Markus
Bamford, Dennis Henry
author_sort Luhtanen, Anne-Mari
title The first known virus isolates from Antarctic sea ice have complex infection patterns
title_short The first known virus isolates from Antarctic sea ice have complex infection patterns
title_full The first known virus isolates from Antarctic sea ice have complex infection patterns
title_fullStr The first known virus isolates from Antarctic sea ice have complex infection patterns
title_full_unstemmed The first known virus isolates from Antarctic sea ice have complex infection patterns
title_sort first known virus isolates from antarctic sea ice have complex infection patterns
publisher Oxford University Press
publishDate 2019
url http://hdl.handle.net/10138/300595
geographic Antarctic
Southern Ocean
Weddell Sea
Weddell
geographic_facet Antarctic
Southern Ocean
Weddell Sea
Weddell
genre Antarc*
Antarctic
Antarctica
Sea ice
Southern Ocean
Weddell Sea
genre_facet Antarc*
Antarctic
Antarctica
Sea ice
Southern Ocean
Weddell Sea
op_relation 10.1093/femsec/fiy028
Luhtanen , A-M , Eronen-Rasimus , E L , Oksanen , H M , Tison , J-L , Delille , B , Dieckmann , G S , Rintala , J-M & Bamford , D H 2018 , ' The first known virus isolates from Antarctic sea ice have complex infection patterns ' , FEMS Microbiology Ecology , vol. 94 , no. 4 , 028 . https://doi.org/10.1093/femsec/fiy028
ORCID: /0000-0002-6438-8118/work/53824987
ORCID: /0000-0003-3047-8294/work/53828131
85043791422
732e6858-8396-411f-a477-982c3322cbd2
http://hdl.handle.net/10138/300595
000429481200008
op_rights openAccess
info:eu-repo/semantics/openAccess
container_title FEMS Microbiology Ecology
container_volume 94
container_issue 4
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