Description of Pseudomonas gregormendelii sp. nov., a novel psychrotrophic bacterium from James Ross Island, Antarctica
During the microbiological research performed within the scope of activities of Czech expeditions based at the Johann Gregor Mendel Station at James Ross Island, Antarctica, two psychrotrophic gram-stain negative non-fluorescent strains CCM 8506T and CCM 8507 from soil were extensively characterized...
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ftunivgent:oai:archive.ugent.be:8526015 2023-06-11T04:05:39+02:00 Description of Pseudomonas gregormendelii sp. nov., a novel psychrotrophic bacterium from James Ross Island, Antarctica Kosina, Marcel Švec, Pavel Černohlávková, Jitka Barták, Miloš Snopková, Kateřina De Vos, Paul Sedláček, Ivo 2016 application/pdf https://biblio.ugent.be/publication/8526015 http://hdl.handle.net/1854/LU-8526015 https://doi.org/10.1007/s00284-016-1029-5 https://biblio.ugent.be/publication/8526015/file/8526016 eng eng https://biblio.ugent.be/publication/8526015 http://hdl.handle.net/1854/LU-8526015 http://dx.doi.org/10.1007/s00284-016-1029-5 https://biblio.ugent.be/publication/8526015/file/8526016 No license (in copyright) info:eu-repo/semantics/restrictedAccess CURRENT MICROBIOLOGY ISSN: 0343-8651 ISSN: 1432-0991 Biology and Life Sciences NATURAL MINERAL WATERS IDENTIFICATION DNA HYBRIDIZATION ENVIRONMENT STRAINS journalArticle info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion 2016 ftunivgent https://doi.org/10.1007/s00284-016-1029-5 2023-05-10T22:36:24Z During the microbiological research performed within the scope of activities of Czech expeditions based at the Johann Gregor Mendel Station at James Ross Island, Antarctica, two psychrotrophic gram-stain negative non-fluorescent strains CCM 8506T and CCM 8507 from soil were extensively characterized using genotypic and phenotypic methods. Initial characterization using ribotyping with HindIII restriction endonuclease and phenotyping implies that both isolates belong to a single Pseudomonas species. Sequencing of rrs, rpoB, rpoD and glnA genes of strain CCM 8506(T) confirmed affiliation of investigated strains within the genus Pseudomonas. Further investigation using automated ribotyping with EcoRI (RiboPrinter(A (R)) Microbial Characterisation System), whole-cell protein profiling using the Agilent 2100 Bioanalyzer system, extensive biochemical testing and DNA-DNA hybridization experiments confirmed that both investigated strains are members of a single taxon which is clearly separated from all hitherto described Pseudomonas spp. Based on all findings, we describe a novel species Pseudomonas gregormendelii sp. nov. with the type strain CCM 8506(T) (=LMG 28632T). Article in Journal/Newspaper Antarc* Antarctica James Ross Island Ross Island Ghent University Academic Bibliography Ross Island Current Microbiology 73 1 84 90 |
institution |
Open Polar |
collection |
Ghent University Academic Bibliography |
op_collection_id |
ftunivgent |
language |
English |
topic |
Biology and Life Sciences NATURAL MINERAL WATERS IDENTIFICATION DNA HYBRIDIZATION ENVIRONMENT STRAINS |
spellingShingle |
Biology and Life Sciences NATURAL MINERAL WATERS IDENTIFICATION DNA HYBRIDIZATION ENVIRONMENT STRAINS Kosina, Marcel Švec, Pavel Černohlávková, Jitka Barták, Miloš Snopková, Kateřina De Vos, Paul Sedláček, Ivo Description of Pseudomonas gregormendelii sp. nov., a novel psychrotrophic bacterium from James Ross Island, Antarctica |
topic_facet |
Biology and Life Sciences NATURAL MINERAL WATERS IDENTIFICATION DNA HYBRIDIZATION ENVIRONMENT STRAINS |
description |
During the microbiological research performed within the scope of activities of Czech expeditions based at the Johann Gregor Mendel Station at James Ross Island, Antarctica, two psychrotrophic gram-stain negative non-fluorescent strains CCM 8506T and CCM 8507 from soil were extensively characterized using genotypic and phenotypic methods. Initial characterization using ribotyping with HindIII restriction endonuclease and phenotyping implies that both isolates belong to a single Pseudomonas species. Sequencing of rrs, rpoB, rpoD and glnA genes of strain CCM 8506(T) confirmed affiliation of investigated strains within the genus Pseudomonas. Further investigation using automated ribotyping with EcoRI (RiboPrinter(A (R)) Microbial Characterisation System), whole-cell protein profiling using the Agilent 2100 Bioanalyzer system, extensive biochemical testing and DNA-DNA hybridization experiments confirmed that both investigated strains are members of a single taxon which is clearly separated from all hitherto described Pseudomonas spp. Based on all findings, we describe a novel species Pseudomonas gregormendelii sp. nov. with the type strain CCM 8506(T) (=LMG 28632T). |
format |
Article in Journal/Newspaper |
author |
Kosina, Marcel Švec, Pavel Černohlávková, Jitka Barták, Miloš Snopková, Kateřina De Vos, Paul Sedláček, Ivo |
author_facet |
Kosina, Marcel Švec, Pavel Černohlávková, Jitka Barták, Miloš Snopková, Kateřina De Vos, Paul Sedláček, Ivo |
author_sort |
Kosina, Marcel |
title |
Description of Pseudomonas gregormendelii sp. nov., a novel psychrotrophic bacterium from James Ross Island, Antarctica |
title_short |
Description of Pseudomonas gregormendelii sp. nov., a novel psychrotrophic bacterium from James Ross Island, Antarctica |
title_full |
Description of Pseudomonas gregormendelii sp. nov., a novel psychrotrophic bacterium from James Ross Island, Antarctica |
title_fullStr |
Description of Pseudomonas gregormendelii sp. nov., a novel psychrotrophic bacterium from James Ross Island, Antarctica |
title_full_unstemmed |
Description of Pseudomonas gregormendelii sp. nov., a novel psychrotrophic bacterium from James Ross Island, Antarctica |
title_sort |
description of pseudomonas gregormendelii sp. nov., a novel psychrotrophic bacterium from james ross island, antarctica |
publishDate |
2016 |
url |
https://biblio.ugent.be/publication/8526015 http://hdl.handle.net/1854/LU-8526015 https://doi.org/10.1007/s00284-016-1029-5 https://biblio.ugent.be/publication/8526015/file/8526016 |
geographic |
Ross Island |
geographic_facet |
Ross Island |
genre |
Antarc* Antarctica James Ross Island Ross Island |
genre_facet |
Antarc* Antarctica James Ross Island Ross Island |
op_source |
CURRENT MICROBIOLOGY ISSN: 0343-8651 ISSN: 1432-0991 |
op_relation |
https://biblio.ugent.be/publication/8526015 http://hdl.handle.net/1854/LU-8526015 http://dx.doi.org/10.1007/s00284-016-1029-5 https://biblio.ugent.be/publication/8526015/file/8526016 |
op_rights |
No license (in copyright) info:eu-repo/semantics/restrictedAccess |
op_doi |
https://doi.org/10.1007/s00284-016-1029-5 |
container_title |
Current Microbiology |
container_volume |
73 |
container_issue |
1 |
container_start_page |
84 |
op_container_end_page |
90 |
_version_ |
1768377217328349184 |