Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the Sor Rondane Mountains, Dronning Maud Land, East Antarctica
The bacterial and microeukaryotic biodiversity were studied using pyrosequencing analysis on a 454 GS FLX+ platform of partial SSU rRNA genes in terrestrial and aquatic habitats of the Sor Rondane Mountains, including soils, on mosses, endolithic communities, cryoconite holes and supraglacial and su...
Published in: | FEMS Microbiology Ecology |
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ftunivgent:oai:archive.ugent.be:8068406 2023-06-11T04:04:47+02:00 Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the Sor Rondane Mountains, Dronning Maud Land, East Antarctica Obbels, Dagmar Verleyen, Elie Mano, Marie-José Namsaraev, Zorigto Sweetlove, Maxime Tytgat, Bjorn Fernandez-Carazo, Rafael De Wever, Aaike D'hondt, Sofie Ertz, Damien Elster, Josef Sabbe, Koen Willems, Anne Wilmotte, Annick Vyverman, Wim 2016 application/pdf https://biblio.ugent.be/publication/8068406 http://hdl.handle.net/1854/LU-8068406 https://doi.org/10.1093/femsec/fiw041 https://biblio.ugent.be/publication/8068406/file/8068434 eng eng https://biblio.ugent.be/publication/8068406 http://hdl.handle.net/1854/LU-8068406 http://dx.doi.org/10.1093/femsec/fiw041 https://biblio.ugent.be/publication/8068406/file/8068434 No license (in copyright) info:eu-repo/semantics/restrictedAccess FEMS MICROBIOLOGY ECOLOGY ISSN: 0168-6496 Biology and Life Sciences MICROBIAL DIVERSITY CYANOBACTERIAL DIVERSITY RIBOSOMAL-RNA SEQUENCES TRANSANTARCTIC MOUNTAINS LIVINGSTON ISLAND ICE-FREE SOUTH DRY VALLEY SOILS WATER cyanobacteria bacteria green algae COMMUNITY STRUCTURE eukaryotes terrestrial biodiversity Antarctica journalArticle info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion 2016 ftunivgent https://doi.org/10.1093/femsec/fiw041 2023-05-10T22:30:01Z The bacterial and microeukaryotic biodiversity were studied using pyrosequencing analysis on a 454 GS FLX+ platform of partial SSU rRNA genes in terrestrial and aquatic habitats of the Sor Rondane Mountains, including soils, on mosses, endolithic communities, cryoconite holes and supraglacial and subglacial meltwater lenses. This inventory was complemented with Denaturing Gradient Gel Electrophoresis targeting Chlorophyta and Cyanobacteria. OTUs belonging to the Rotifera, Chlorophyta, Tardigrada, Ciliophora, Cercozoa, Fungi, Bryophyta, Bacillariophyta, Collembola and Nematoda were present with a relative abundance of at least 0.1% in the eukaryotic communities. Cyanobacteria, Proteobacteria, Bacteroidetes, Acidobacteria, FBP and Actinobacteria were the most abundant bacterial phyla. Multivariate analyses of the pyrosequencing data revealed a general lack of differentiation of both eukaryotes and prokaryotes according to habitat type. However, the bacterial community structure in the aquatic habitats was dominated by the filamentous cyanobacteria Leptolyngbya and appeared to be significantly different compared with those in dry soils, on mosses, and in endolithic habitats. A striking feature in all datasets was the detection of a relatively large amount of sequences new to science, which underscores the need for additional biodiversity assessments in Antarctic inland locations. Article in Journal/Newspaper Antarc* Antarctic Antarctica Dronning Maud Land East Antarctica Livingston Island Ghent University Academic Bibliography Antarctic East Antarctica Dronning Maud Land Transantarctic Mountains Livingston Island ENVELOPE(-60.500,-60.500,-62.600,-62.600) Sor-Rondane ENVELOPE(25.000,25.000,-72.000,-72.000) Sor Rondane Mountains ENVELOPE(25.000,25.000,-72.000,-72.000) FEMS Microbiology Ecology 92 6 fiw041 |
institution |
Open Polar |
collection |
Ghent University Academic Bibliography |
op_collection_id |
ftunivgent |
language |
English |
topic |
Biology and Life Sciences MICROBIAL DIVERSITY CYANOBACTERIAL DIVERSITY RIBOSOMAL-RNA SEQUENCES TRANSANTARCTIC MOUNTAINS LIVINGSTON ISLAND ICE-FREE SOUTH DRY VALLEY SOILS WATER cyanobacteria bacteria green algae COMMUNITY STRUCTURE eukaryotes terrestrial biodiversity Antarctica |
spellingShingle |
Biology and Life Sciences MICROBIAL DIVERSITY CYANOBACTERIAL DIVERSITY RIBOSOMAL-RNA SEQUENCES TRANSANTARCTIC MOUNTAINS LIVINGSTON ISLAND ICE-FREE SOUTH DRY VALLEY SOILS WATER cyanobacteria bacteria green algae COMMUNITY STRUCTURE eukaryotes terrestrial biodiversity Antarctica Obbels, Dagmar Verleyen, Elie Mano, Marie-José Namsaraev, Zorigto Sweetlove, Maxime Tytgat, Bjorn Fernandez-Carazo, Rafael De Wever, Aaike D'hondt, Sofie Ertz, Damien Elster, Josef Sabbe, Koen Willems, Anne Wilmotte, Annick Vyverman, Wim Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the Sor Rondane Mountains, Dronning Maud Land, East Antarctica |
topic_facet |
Biology and Life Sciences MICROBIAL DIVERSITY CYANOBACTERIAL DIVERSITY RIBOSOMAL-RNA SEQUENCES TRANSANTARCTIC MOUNTAINS LIVINGSTON ISLAND ICE-FREE SOUTH DRY VALLEY SOILS WATER cyanobacteria bacteria green algae COMMUNITY STRUCTURE eukaryotes terrestrial biodiversity Antarctica |
description |
The bacterial and microeukaryotic biodiversity were studied using pyrosequencing analysis on a 454 GS FLX+ platform of partial SSU rRNA genes in terrestrial and aquatic habitats of the Sor Rondane Mountains, including soils, on mosses, endolithic communities, cryoconite holes and supraglacial and subglacial meltwater lenses. This inventory was complemented with Denaturing Gradient Gel Electrophoresis targeting Chlorophyta and Cyanobacteria. OTUs belonging to the Rotifera, Chlorophyta, Tardigrada, Ciliophora, Cercozoa, Fungi, Bryophyta, Bacillariophyta, Collembola and Nematoda were present with a relative abundance of at least 0.1% in the eukaryotic communities. Cyanobacteria, Proteobacteria, Bacteroidetes, Acidobacteria, FBP and Actinobacteria were the most abundant bacterial phyla. Multivariate analyses of the pyrosequencing data revealed a general lack of differentiation of both eukaryotes and prokaryotes according to habitat type. However, the bacterial community structure in the aquatic habitats was dominated by the filamentous cyanobacteria Leptolyngbya and appeared to be significantly different compared with those in dry soils, on mosses, and in endolithic habitats. A striking feature in all datasets was the detection of a relatively large amount of sequences new to science, which underscores the need for additional biodiversity assessments in Antarctic inland locations. |
format |
Article in Journal/Newspaper |
author |
Obbels, Dagmar Verleyen, Elie Mano, Marie-José Namsaraev, Zorigto Sweetlove, Maxime Tytgat, Bjorn Fernandez-Carazo, Rafael De Wever, Aaike D'hondt, Sofie Ertz, Damien Elster, Josef Sabbe, Koen Willems, Anne Wilmotte, Annick Vyverman, Wim |
author_facet |
Obbels, Dagmar Verleyen, Elie Mano, Marie-José Namsaraev, Zorigto Sweetlove, Maxime Tytgat, Bjorn Fernandez-Carazo, Rafael De Wever, Aaike D'hondt, Sofie Ertz, Damien Elster, Josef Sabbe, Koen Willems, Anne Wilmotte, Annick Vyverman, Wim |
author_sort |
Obbels, Dagmar |
title |
Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the Sor Rondane Mountains, Dronning Maud Land, East Antarctica |
title_short |
Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the Sor Rondane Mountains, Dronning Maud Land, East Antarctica |
title_full |
Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the Sor Rondane Mountains, Dronning Maud Land, East Antarctica |
title_fullStr |
Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the Sor Rondane Mountains, Dronning Maud Land, East Antarctica |
title_full_unstemmed |
Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the Sor Rondane Mountains, Dronning Maud Land, East Antarctica |
title_sort |
bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the sor rondane mountains, dronning maud land, east antarctica |
publishDate |
2016 |
url |
https://biblio.ugent.be/publication/8068406 http://hdl.handle.net/1854/LU-8068406 https://doi.org/10.1093/femsec/fiw041 https://biblio.ugent.be/publication/8068406/file/8068434 |
long_lat |
ENVELOPE(-60.500,-60.500,-62.600,-62.600) ENVELOPE(25.000,25.000,-72.000,-72.000) ENVELOPE(25.000,25.000,-72.000,-72.000) |
geographic |
Antarctic East Antarctica Dronning Maud Land Transantarctic Mountains Livingston Island Sor-Rondane Sor Rondane Mountains |
geographic_facet |
Antarctic East Antarctica Dronning Maud Land Transantarctic Mountains Livingston Island Sor-Rondane Sor Rondane Mountains |
genre |
Antarc* Antarctic Antarctica Dronning Maud Land East Antarctica Livingston Island |
genre_facet |
Antarc* Antarctic Antarctica Dronning Maud Land East Antarctica Livingston Island |
op_source |
FEMS MICROBIOLOGY ECOLOGY ISSN: 0168-6496 |
op_relation |
https://biblio.ugent.be/publication/8068406 http://hdl.handle.net/1854/LU-8068406 http://dx.doi.org/10.1093/femsec/fiw041 https://biblio.ugent.be/publication/8068406/file/8068434 |
op_rights |
No license (in copyright) info:eu-repo/semantics/restrictedAccess |
op_doi |
https://doi.org/10.1093/femsec/fiw041 |
container_title |
FEMS Microbiology Ecology |
container_volume |
92 |
container_issue |
6 |
container_start_page |
fiw041 |
_version_ |
1768390612755677184 |