Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the Sor Rondane Mountains, Dronning Maud Land, East Antarctica

The bacterial and microeukaryotic biodiversity were studied using pyrosequencing analysis on a 454 GS FLX+ platform of partial SSU rRNA genes in terrestrial and aquatic habitats of the Sor Rondane Mountains, including soils, on mosses, endolithic communities, cryoconite holes and supraglacial and su...

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Published in:FEMS Microbiology Ecology
Main Authors: Obbels, Dagmar, Verleyen, Elie, Mano, Marie-José, Namsaraev, Zorigto, Sweetlove, Maxime, Tytgat, Bjorn, Fernandez-Carazo, Rafael, De Wever, Aaike, D'hondt, Sofie, Ertz, Damien, Elster, Josef, Sabbe, Koen, Willems, Anne, Wilmotte, Annick, Vyverman, Wim
Format: Article in Journal/Newspaper
Language:English
Published: 2016
Subjects:
Online Access:https://biblio.ugent.be/publication/8068406
http://hdl.handle.net/1854/LU-8068406
https://doi.org/10.1093/femsec/fiw041
https://biblio.ugent.be/publication/8068406/file/8068434
id ftunivgent:oai:archive.ugent.be:8068406
record_format openpolar
spelling ftunivgent:oai:archive.ugent.be:8068406 2023-06-11T04:04:47+02:00 Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the Sor Rondane Mountains, Dronning Maud Land, East Antarctica Obbels, Dagmar Verleyen, Elie Mano, Marie-José Namsaraev, Zorigto Sweetlove, Maxime Tytgat, Bjorn Fernandez-Carazo, Rafael De Wever, Aaike D'hondt, Sofie Ertz, Damien Elster, Josef Sabbe, Koen Willems, Anne Wilmotte, Annick Vyverman, Wim 2016 application/pdf https://biblio.ugent.be/publication/8068406 http://hdl.handle.net/1854/LU-8068406 https://doi.org/10.1093/femsec/fiw041 https://biblio.ugent.be/publication/8068406/file/8068434 eng eng https://biblio.ugent.be/publication/8068406 http://hdl.handle.net/1854/LU-8068406 http://dx.doi.org/10.1093/femsec/fiw041 https://biblio.ugent.be/publication/8068406/file/8068434 No license (in copyright) info:eu-repo/semantics/restrictedAccess FEMS MICROBIOLOGY ECOLOGY ISSN: 0168-6496 Biology and Life Sciences MICROBIAL DIVERSITY CYANOBACTERIAL DIVERSITY RIBOSOMAL-RNA SEQUENCES TRANSANTARCTIC MOUNTAINS LIVINGSTON ISLAND ICE-FREE SOUTH DRY VALLEY SOILS WATER cyanobacteria bacteria green algae COMMUNITY STRUCTURE eukaryotes terrestrial biodiversity Antarctica journalArticle info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion 2016 ftunivgent https://doi.org/10.1093/femsec/fiw041 2023-05-10T22:30:01Z The bacterial and microeukaryotic biodiversity were studied using pyrosequencing analysis on a 454 GS FLX+ platform of partial SSU rRNA genes in terrestrial and aquatic habitats of the Sor Rondane Mountains, including soils, on mosses, endolithic communities, cryoconite holes and supraglacial and subglacial meltwater lenses. This inventory was complemented with Denaturing Gradient Gel Electrophoresis targeting Chlorophyta and Cyanobacteria. OTUs belonging to the Rotifera, Chlorophyta, Tardigrada, Ciliophora, Cercozoa, Fungi, Bryophyta, Bacillariophyta, Collembola and Nematoda were present with a relative abundance of at least 0.1% in the eukaryotic communities. Cyanobacteria, Proteobacteria, Bacteroidetes, Acidobacteria, FBP and Actinobacteria were the most abundant bacterial phyla. Multivariate analyses of the pyrosequencing data revealed a general lack of differentiation of both eukaryotes and prokaryotes according to habitat type. However, the bacterial community structure in the aquatic habitats was dominated by the filamentous cyanobacteria Leptolyngbya and appeared to be significantly different compared with those in dry soils, on mosses, and in endolithic habitats. A striking feature in all datasets was the detection of a relatively large amount of sequences new to science, which underscores the need for additional biodiversity assessments in Antarctic inland locations. Article in Journal/Newspaper Antarc* Antarctic Antarctica Dronning Maud Land East Antarctica Livingston Island Ghent University Academic Bibliography Antarctic East Antarctica Dronning Maud Land Transantarctic Mountains Livingston Island ENVELOPE(-60.500,-60.500,-62.600,-62.600) Sor-Rondane ENVELOPE(25.000,25.000,-72.000,-72.000) Sor Rondane Mountains ENVELOPE(25.000,25.000,-72.000,-72.000) FEMS Microbiology Ecology 92 6 fiw041
institution Open Polar
collection Ghent University Academic Bibliography
op_collection_id ftunivgent
language English
topic Biology and Life Sciences
MICROBIAL DIVERSITY
CYANOBACTERIAL DIVERSITY
RIBOSOMAL-RNA SEQUENCES
TRANSANTARCTIC MOUNTAINS
LIVINGSTON ISLAND
ICE-FREE
SOUTH
DRY VALLEY SOILS
WATER
cyanobacteria
bacteria
green algae
COMMUNITY STRUCTURE
eukaryotes
terrestrial biodiversity
Antarctica
spellingShingle Biology and Life Sciences
MICROBIAL DIVERSITY
CYANOBACTERIAL DIVERSITY
RIBOSOMAL-RNA SEQUENCES
TRANSANTARCTIC MOUNTAINS
LIVINGSTON ISLAND
ICE-FREE
SOUTH
DRY VALLEY SOILS
WATER
cyanobacteria
bacteria
green algae
COMMUNITY STRUCTURE
eukaryotes
terrestrial biodiversity
Antarctica
Obbels, Dagmar
Verleyen, Elie
Mano, Marie-José
Namsaraev, Zorigto
Sweetlove, Maxime
Tytgat, Bjorn
Fernandez-Carazo, Rafael
De Wever, Aaike
D'hondt, Sofie
Ertz, Damien
Elster, Josef
Sabbe, Koen
Willems, Anne
Wilmotte, Annick
Vyverman, Wim
Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the Sor Rondane Mountains, Dronning Maud Land, East Antarctica
topic_facet Biology and Life Sciences
MICROBIAL DIVERSITY
CYANOBACTERIAL DIVERSITY
RIBOSOMAL-RNA SEQUENCES
TRANSANTARCTIC MOUNTAINS
LIVINGSTON ISLAND
ICE-FREE
SOUTH
DRY VALLEY SOILS
WATER
cyanobacteria
bacteria
green algae
COMMUNITY STRUCTURE
eukaryotes
terrestrial biodiversity
Antarctica
description The bacterial and microeukaryotic biodiversity were studied using pyrosequencing analysis on a 454 GS FLX+ platform of partial SSU rRNA genes in terrestrial and aquatic habitats of the Sor Rondane Mountains, including soils, on mosses, endolithic communities, cryoconite holes and supraglacial and subglacial meltwater lenses. This inventory was complemented with Denaturing Gradient Gel Electrophoresis targeting Chlorophyta and Cyanobacteria. OTUs belonging to the Rotifera, Chlorophyta, Tardigrada, Ciliophora, Cercozoa, Fungi, Bryophyta, Bacillariophyta, Collembola and Nematoda were present with a relative abundance of at least 0.1% in the eukaryotic communities. Cyanobacteria, Proteobacteria, Bacteroidetes, Acidobacteria, FBP and Actinobacteria were the most abundant bacterial phyla. Multivariate analyses of the pyrosequencing data revealed a general lack of differentiation of both eukaryotes and prokaryotes according to habitat type. However, the bacterial community structure in the aquatic habitats was dominated by the filamentous cyanobacteria Leptolyngbya and appeared to be significantly different compared with those in dry soils, on mosses, and in endolithic habitats. A striking feature in all datasets was the detection of a relatively large amount of sequences new to science, which underscores the need for additional biodiversity assessments in Antarctic inland locations.
format Article in Journal/Newspaper
author Obbels, Dagmar
Verleyen, Elie
Mano, Marie-José
Namsaraev, Zorigto
Sweetlove, Maxime
Tytgat, Bjorn
Fernandez-Carazo, Rafael
De Wever, Aaike
D'hondt, Sofie
Ertz, Damien
Elster, Josef
Sabbe, Koen
Willems, Anne
Wilmotte, Annick
Vyverman, Wim
author_facet Obbels, Dagmar
Verleyen, Elie
Mano, Marie-José
Namsaraev, Zorigto
Sweetlove, Maxime
Tytgat, Bjorn
Fernandez-Carazo, Rafael
De Wever, Aaike
D'hondt, Sofie
Ertz, Damien
Elster, Josef
Sabbe, Koen
Willems, Anne
Wilmotte, Annick
Vyverman, Wim
author_sort Obbels, Dagmar
title Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the Sor Rondane Mountains, Dronning Maud Land, East Antarctica
title_short Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the Sor Rondane Mountains, Dronning Maud Land, East Antarctica
title_full Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the Sor Rondane Mountains, Dronning Maud Land, East Antarctica
title_fullStr Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the Sor Rondane Mountains, Dronning Maud Land, East Antarctica
title_full_unstemmed Bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the Sor Rondane Mountains, Dronning Maud Land, East Antarctica
title_sort bacterial and eukaryotic biodiversity patterns in terrestrial and aquatic habitats in the sor rondane mountains, dronning maud land, east antarctica
publishDate 2016
url https://biblio.ugent.be/publication/8068406
http://hdl.handle.net/1854/LU-8068406
https://doi.org/10.1093/femsec/fiw041
https://biblio.ugent.be/publication/8068406/file/8068434
long_lat ENVELOPE(-60.500,-60.500,-62.600,-62.600)
ENVELOPE(25.000,25.000,-72.000,-72.000)
ENVELOPE(25.000,25.000,-72.000,-72.000)
geographic Antarctic
East Antarctica
Dronning Maud Land
Transantarctic Mountains
Livingston Island
Sor-Rondane
Sor Rondane Mountains
geographic_facet Antarctic
East Antarctica
Dronning Maud Land
Transantarctic Mountains
Livingston Island
Sor-Rondane
Sor Rondane Mountains
genre Antarc*
Antarctic
Antarctica
Dronning Maud Land
East Antarctica
Livingston Island
genre_facet Antarc*
Antarctic
Antarctica
Dronning Maud Land
East Antarctica
Livingston Island
op_source FEMS MICROBIOLOGY ECOLOGY
ISSN: 0168-6496
op_relation https://biblio.ugent.be/publication/8068406
http://hdl.handle.net/1854/LU-8068406
http://dx.doi.org/10.1093/femsec/fiw041
https://biblio.ugent.be/publication/8068406/file/8068434
op_rights No license (in copyright)
info:eu-repo/semantics/restrictedAccess
op_doi https://doi.org/10.1093/femsec/fiw041
container_title FEMS Microbiology Ecology
container_volume 92
container_issue 6
container_start_page fiw041
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