Structural, functional, and genetic characterization of Gastrophilus hemoglobin

Hemoglobin of Gastrophilus intestinalis (Insecta, Diptera), was purified and characterized. At least two isoforms have been identified by isoelectrofocusing, mass spectrometry, and genomic Southern blotting. Functional studies show a high oxygen affinity due to a low ligand dissociation rate (k(off)...

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Published in:Journal of Biological Chemistry
Main Authors: Dewilde, Sylvia, Blaxter, Mark, Van Hauwaert, Marie-Louise, Van Houte, Koen, Pesce, Alessandra, Griffon, Nathalie, Kiger, Laurent, Marden, Michael C, Vermeire, Sven, Vanfleteren, Jacques, Esmans, Eddy, Moens, Luc
Format: Article in Journal/Newspaper
Language:English
Published: 1998
Subjects:
Online Access:https://biblio.ugent.be/publication/181007
http://hdl.handle.net/1854/LU-181007
https://doi.org/10.1074/jbc.273.49.32467
https://biblio.ugent.be/publication/181007/file/3056306
id ftunivgent:oai:archive.ugent.be:181007
record_format openpolar
spelling ftunivgent:oai:archive.ugent.be:181007 2023-10-01T03:59:40+02:00 Structural, functional, and genetic characterization of Gastrophilus hemoglobin Dewilde, Sylvia Blaxter, Mark Van Hauwaert, Marie-Louise Van Houte, Koen Pesce, Alessandra Griffon, Nathalie Kiger, Laurent Marden, Michael C Vermeire, Sven Vanfleteren, Jacques Esmans, Eddy Moens, Luc 1998 application/pdf https://biblio.ugent.be/publication/181007 http://hdl.handle.net/1854/LU-181007 https://doi.org/10.1074/jbc.273.49.32467 https://biblio.ugent.be/publication/181007/file/3056306 eng eng https://biblio.ugent.be/publication/181007 http://hdl.handle.net/1854/LU-181007 http://dx.doi.org/10.1074/jbc.273.49.32467 https://biblio.ugent.be/publication/181007/file/3056306 No license (in copyright) info:eu-repo/semantics/restrictedAccess JOURNAL OF BIOLOGICAL CHEMISTRY ISSN: 0021-9258 Biology and Life Sciences INSECT CHIRONOMUS-THUMMI NONVERTEBRATE GLOBIN GENES AMINO-ACID SUBSTITUTION SPERM WHALE MYOGLOBIN LIGAND-BINDING ASCARIS HEMOGLOBIN INTRON POSITIONS CENTRAL EXON EVOLUTION SEQUENCES journalArticle info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion 1998 ftunivgent https://doi.org/10.1074/jbc.273.49.32467 2023-09-06T22:29:43Z Hemoglobin of Gastrophilus intestinalis (Insecta, Diptera), was purified and characterized. At least two isoforms have been identified by isoelectrofocusing, mass spectrometry, and genomic Southern blotting. Functional studies show a high oxygen affinity due to a low ligand dissociation rate (k(off) = 2.4 s(-1)) and a relatively high autoxidation rate (t(1/2) = 1.6/h), The globins were separated under denaturing conditions, and the sequence of Hb1 (M-r = 17,965 +/- 2) was determined at the protein and DNA level, The open reading frame codes for a polypeptide of 150 amino acids. Although the globin is distantly related to globins from other species, it has a low penalty score against globin templates. Freshly isolated hemoglobin was crystallized from polyethylene glycol. Crystals contain two hemoglobin molecules per asymmetric unit. Solution of the three-dimensional structure by molecular replacement could not be achieved, possibly due to the presence of three protein isoforms in the crystals. In order to determine its three-dimensional structure, G. intestinalis Hb1 was overexpressed in Escherichia coli, resulting in a fully functional molecule as confirmed by Ligand binding affinity. The globin gene contains two introns at positions D7.0 and G7.0. The D7.0 intron is unprecedented, suggesting that globin gene evolution is much more complex than originally thought. Article in Journal/Newspaper Sperm whale Ghent University Academic Bibliography Journal of Biological Chemistry 273 49 32467 32474
institution Open Polar
collection Ghent University Academic Bibliography
op_collection_id ftunivgent
language English
topic Biology and Life Sciences
INSECT CHIRONOMUS-THUMMI
NONVERTEBRATE GLOBIN GENES
AMINO-ACID SUBSTITUTION
SPERM WHALE MYOGLOBIN
LIGAND-BINDING
ASCARIS HEMOGLOBIN
INTRON POSITIONS
CENTRAL EXON
EVOLUTION
SEQUENCES
spellingShingle Biology and Life Sciences
INSECT CHIRONOMUS-THUMMI
NONVERTEBRATE GLOBIN GENES
AMINO-ACID SUBSTITUTION
SPERM WHALE MYOGLOBIN
LIGAND-BINDING
ASCARIS HEMOGLOBIN
INTRON POSITIONS
CENTRAL EXON
EVOLUTION
SEQUENCES
Dewilde, Sylvia
Blaxter, Mark
Van Hauwaert, Marie-Louise
Van Houte, Koen
Pesce, Alessandra
Griffon, Nathalie
Kiger, Laurent
Marden, Michael C
Vermeire, Sven
Vanfleteren, Jacques
Esmans, Eddy
Moens, Luc
Structural, functional, and genetic characterization of Gastrophilus hemoglobin
topic_facet Biology and Life Sciences
INSECT CHIRONOMUS-THUMMI
NONVERTEBRATE GLOBIN GENES
AMINO-ACID SUBSTITUTION
SPERM WHALE MYOGLOBIN
LIGAND-BINDING
ASCARIS HEMOGLOBIN
INTRON POSITIONS
CENTRAL EXON
EVOLUTION
SEQUENCES
description Hemoglobin of Gastrophilus intestinalis (Insecta, Diptera), was purified and characterized. At least two isoforms have been identified by isoelectrofocusing, mass spectrometry, and genomic Southern blotting. Functional studies show a high oxygen affinity due to a low ligand dissociation rate (k(off) = 2.4 s(-1)) and a relatively high autoxidation rate (t(1/2) = 1.6/h), The globins were separated under denaturing conditions, and the sequence of Hb1 (M-r = 17,965 +/- 2) was determined at the protein and DNA level, The open reading frame codes for a polypeptide of 150 amino acids. Although the globin is distantly related to globins from other species, it has a low penalty score against globin templates. Freshly isolated hemoglobin was crystallized from polyethylene glycol. Crystals contain two hemoglobin molecules per asymmetric unit. Solution of the three-dimensional structure by molecular replacement could not be achieved, possibly due to the presence of three protein isoforms in the crystals. In order to determine its three-dimensional structure, G. intestinalis Hb1 was overexpressed in Escherichia coli, resulting in a fully functional molecule as confirmed by Ligand binding affinity. The globin gene contains two introns at positions D7.0 and G7.0. The D7.0 intron is unprecedented, suggesting that globin gene evolution is much more complex than originally thought.
format Article in Journal/Newspaper
author Dewilde, Sylvia
Blaxter, Mark
Van Hauwaert, Marie-Louise
Van Houte, Koen
Pesce, Alessandra
Griffon, Nathalie
Kiger, Laurent
Marden, Michael C
Vermeire, Sven
Vanfleteren, Jacques
Esmans, Eddy
Moens, Luc
author_facet Dewilde, Sylvia
Blaxter, Mark
Van Hauwaert, Marie-Louise
Van Houte, Koen
Pesce, Alessandra
Griffon, Nathalie
Kiger, Laurent
Marden, Michael C
Vermeire, Sven
Vanfleteren, Jacques
Esmans, Eddy
Moens, Luc
author_sort Dewilde, Sylvia
title Structural, functional, and genetic characterization of Gastrophilus hemoglobin
title_short Structural, functional, and genetic characterization of Gastrophilus hemoglobin
title_full Structural, functional, and genetic characterization of Gastrophilus hemoglobin
title_fullStr Structural, functional, and genetic characterization of Gastrophilus hemoglobin
title_full_unstemmed Structural, functional, and genetic characterization of Gastrophilus hemoglobin
title_sort structural, functional, and genetic characterization of gastrophilus hemoglobin
publishDate 1998
url https://biblio.ugent.be/publication/181007
http://hdl.handle.net/1854/LU-181007
https://doi.org/10.1074/jbc.273.49.32467
https://biblio.ugent.be/publication/181007/file/3056306
genre Sperm whale
genre_facet Sperm whale
op_source JOURNAL OF BIOLOGICAL CHEMISTRY
ISSN: 0021-9258
op_relation https://biblio.ugent.be/publication/181007
http://hdl.handle.net/1854/LU-181007
http://dx.doi.org/10.1074/jbc.273.49.32467
https://biblio.ugent.be/publication/181007/file/3056306
op_rights No license (in copyright)
info:eu-repo/semantics/restrictedAccess
op_doi https://doi.org/10.1074/jbc.273.49.32467
container_title Journal of Biological Chemistry
container_volume 273
container_issue 49
container_start_page 32467
op_container_end_page 32474
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