DataSheet_1_Histone lysine-specific demethylase 1 regulates the proliferation of hemocytes in the oyster Crassostrea gigas.docx

Background Lysine-specific demethylase 1 (LSD1) is an essential epigenetic regulator of hematopoietic differentiation, which can specifically mono-methylate H3K4 (H3K4me1) and di-methylate H3K4 (H3K4me2) as a transcriptional corepressor. Previous reports have been suggested that it participated in h...

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Main Authors: Xiaoyu Gu (576058), Xue Qiao (1409857), Simiao Yu (4577854), Xiaorui Song (423861), Lingling Wang (66269), Linsheng Song (154137)
Format: Dataset
Language:unknown
Published: 2022
Subjects:
Online Access:https://doi.org/10.3389/fimmu.2022.1088149.s001
id ftunivfreestate:oai:figshare.com:article/21729689
record_format openpolar
spelling ftunivfreestate:oai:figshare.com:article/21729689 2023-05-15T15:58:31+02:00 DataSheet_1_Histone lysine-specific demethylase 1 regulates the proliferation of hemocytes in the oyster Crassostrea gigas.docx Xiaoyu Gu (576058) Xue Qiao (1409857) Simiao Yu (4577854) Xiaorui Song (423861) Lingling Wang (66269) Linsheng Song (154137) 2022-12-15T04:30:27Z https://doi.org/10.3389/fimmu.2022.1088149.s001 unknown https://figshare.com/articles/dataset/DataSheet_1_Histone_lysine-specific_demethylase_1_regulates_the_proliferation_of_hemocytes_in_the_oyster_Crassostrea_gigas_docx/21729689 doi:10.3389/fimmu.2022.1088149.s001 CC BY 4.0 CC-BY Immunology Applied Immunology (incl. Antibody Engineering Xenotransplantation and T-cell Therapies) Autoimmunity Cellular Immunology Humoural Immunology and Immunochemistry Immunogenetics (incl. Genetic Immunology) Innate Immunity Transplantation Immunology Tumour Immunology Immunology not elsewhere classified Genetic Immunology Animal Immunology Veterinary Immunology Crassostrea gigas hemocytes LSD1 histone demethylation cell proliferation Dataset 2022 ftunivfreestate https://doi.org/10.3389/fimmu.2022.1088149.s001 2022-12-16T00:18:46Z Background Lysine-specific demethylase 1 (LSD1) is an essential epigenetic regulator of hematopoietic differentiation, which can specifically mono-methylate H3K4 (H3K4me1) and di-methylate H3K4 (H3K4me2) as a transcriptional corepressor. Previous reports have been suggested that it participated in hematopoiesis and embryonic development process. Here, a conserved LSD1 (CgLSD1) with a SWIRM domain and an amino oxidase (AO) domain was identified from the Pacific oyster Crassostrea gigas. Methods We conducted a comprehensive analysis by various means to verify the function of CgLSD1 in hematopoietic process, including quantitative real-time PCR (qRT-PCR) analysis, western blot analysis, immunofluorescence assay, RNA interference (RNAi) and flow cytometry. Results The qRT-PCR analysis revealed that the transcripts of CgLSD1 were widely expressed in oyster tissues with the highest level in the mantle. And the transcripts of CgLSD1 were ubiquitously expressed during larval development with the highest expression level at the early D-veliger larvae stage. In hemocytes after Vibrio splendidus stimulation, the transcripts of CgLSD1 were significantly downregulated at 3, 6, 24, and 48 h with the lowest level at 3 h compared to that in the Seawater group (SW group). Immunocytochemical analysis showed that CgLSD1 was mainly distributed in the nucleus of hemocytes. After the CgLSD1 was knocked down by RNAi, the H3K4me1 and H3K4me2 methylation level significantly increased in hemocyte protein. Besides, the percentage of hemocytes with EdU-positive signals in the total circulating hemocytes significantly increased after V. splendidus stimulation. After RNAi of CgLSD1, the expression of potential granulocyte markers CgSOX11 and CgAATase as well as oyster cytokine-like factor CgAstakine were increased significantly in mRNA level, while the transcripts of potential agranulocyte marker CgCD9 was decreased significantly after V. splendidus stimulation. Conclusion The above results demonstrated that CgLSD1 was a conserved member of ... Dataset Crassostrea gigas Pacific oyster KovsieScholar Repository (University of the Free State - UFS UV) Pacific
institution Open Polar
collection KovsieScholar Repository (University of the Free State - UFS UV)
op_collection_id ftunivfreestate
language unknown
topic Immunology
Applied Immunology (incl. Antibody Engineering
Xenotransplantation and T-cell Therapies)
Autoimmunity
Cellular Immunology
Humoural Immunology and Immunochemistry
Immunogenetics (incl. Genetic Immunology)
Innate Immunity
Transplantation Immunology
Tumour Immunology
Immunology not elsewhere classified
Genetic Immunology
Animal Immunology
Veterinary Immunology
Crassostrea gigas
hemocytes
LSD1
histone demethylation
cell proliferation
spellingShingle Immunology
Applied Immunology (incl. Antibody Engineering
Xenotransplantation and T-cell Therapies)
Autoimmunity
Cellular Immunology
Humoural Immunology and Immunochemistry
Immunogenetics (incl. Genetic Immunology)
Innate Immunity
Transplantation Immunology
Tumour Immunology
Immunology not elsewhere classified
Genetic Immunology
Animal Immunology
Veterinary Immunology
Crassostrea gigas
hemocytes
LSD1
histone demethylation
cell proliferation
Xiaoyu Gu (576058)
Xue Qiao (1409857)
Simiao Yu (4577854)
Xiaorui Song (423861)
Lingling Wang (66269)
Linsheng Song (154137)
DataSheet_1_Histone lysine-specific demethylase 1 regulates the proliferation of hemocytes in the oyster Crassostrea gigas.docx
topic_facet Immunology
Applied Immunology (incl. Antibody Engineering
Xenotransplantation and T-cell Therapies)
Autoimmunity
Cellular Immunology
Humoural Immunology and Immunochemistry
Immunogenetics (incl. Genetic Immunology)
Innate Immunity
Transplantation Immunology
Tumour Immunology
Immunology not elsewhere classified
Genetic Immunology
Animal Immunology
Veterinary Immunology
Crassostrea gigas
hemocytes
LSD1
histone demethylation
cell proliferation
description Background Lysine-specific demethylase 1 (LSD1) is an essential epigenetic regulator of hematopoietic differentiation, which can specifically mono-methylate H3K4 (H3K4me1) and di-methylate H3K4 (H3K4me2) as a transcriptional corepressor. Previous reports have been suggested that it participated in hematopoiesis and embryonic development process. Here, a conserved LSD1 (CgLSD1) with a SWIRM domain and an amino oxidase (AO) domain was identified from the Pacific oyster Crassostrea gigas. Methods We conducted a comprehensive analysis by various means to verify the function of CgLSD1 in hematopoietic process, including quantitative real-time PCR (qRT-PCR) analysis, western blot analysis, immunofluorescence assay, RNA interference (RNAi) and flow cytometry. Results The qRT-PCR analysis revealed that the transcripts of CgLSD1 were widely expressed in oyster tissues with the highest level in the mantle. And the transcripts of CgLSD1 were ubiquitously expressed during larval development with the highest expression level at the early D-veliger larvae stage. In hemocytes after Vibrio splendidus stimulation, the transcripts of CgLSD1 were significantly downregulated at 3, 6, 24, and 48 h with the lowest level at 3 h compared to that in the Seawater group (SW group). Immunocytochemical analysis showed that CgLSD1 was mainly distributed in the nucleus of hemocytes. After the CgLSD1 was knocked down by RNAi, the H3K4me1 and H3K4me2 methylation level significantly increased in hemocyte protein. Besides, the percentage of hemocytes with EdU-positive signals in the total circulating hemocytes significantly increased after V. splendidus stimulation. After RNAi of CgLSD1, the expression of potential granulocyte markers CgSOX11 and CgAATase as well as oyster cytokine-like factor CgAstakine were increased significantly in mRNA level, while the transcripts of potential agranulocyte marker CgCD9 was decreased significantly after V. splendidus stimulation. Conclusion The above results demonstrated that CgLSD1 was a conserved member of ...
format Dataset
author Xiaoyu Gu (576058)
Xue Qiao (1409857)
Simiao Yu (4577854)
Xiaorui Song (423861)
Lingling Wang (66269)
Linsheng Song (154137)
author_facet Xiaoyu Gu (576058)
Xue Qiao (1409857)
Simiao Yu (4577854)
Xiaorui Song (423861)
Lingling Wang (66269)
Linsheng Song (154137)
author_sort Xiaoyu Gu (576058)
title DataSheet_1_Histone lysine-specific demethylase 1 regulates the proliferation of hemocytes in the oyster Crassostrea gigas.docx
title_short DataSheet_1_Histone lysine-specific demethylase 1 regulates the proliferation of hemocytes in the oyster Crassostrea gigas.docx
title_full DataSheet_1_Histone lysine-specific demethylase 1 regulates the proliferation of hemocytes in the oyster Crassostrea gigas.docx
title_fullStr DataSheet_1_Histone lysine-specific demethylase 1 regulates the proliferation of hemocytes in the oyster Crassostrea gigas.docx
title_full_unstemmed DataSheet_1_Histone lysine-specific demethylase 1 regulates the proliferation of hemocytes in the oyster Crassostrea gigas.docx
title_sort datasheet_1_histone lysine-specific demethylase 1 regulates the proliferation of hemocytes in the oyster crassostrea gigas.docx
publishDate 2022
url https://doi.org/10.3389/fimmu.2022.1088149.s001
geographic Pacific
geographic_facet Pacific
genre Crassostrea gigas
Pacific oyster
genre_facet Crassostrea gigas
Pacific oyster
op_relation https://figshare.com/articles/dataset/DataSheet_1_Histone_lysine-specific_demethylase_1_regulates_the_proliferation_of_hemocytes_in_the_oyster_Crassostrea_gigas_docx/21729689
doi:10.3389/fimmu.2022.1088149.s001
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.3389/fimmu.2022.1088149.s001
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