Venn diagrams of Gene Ontologies (GO) comparing different photoperiods.

A) Upregulated GO terms comparing a constant lighting environment (DD or LL) to LDM revealed 7 common ontologies. In LL, 55 GO terms were upregulated (see S8 Table for a complete list). B) Downregulated GO terms comparing constant environment (DD or LL) to LDM, 10 common ontologies were found.

Bibliographic Details
Main Authors: Mariann Eilertsen (11502317), David W. P. Dolan (14247792), Charlotte M. Bolton (11780345), Rita Karlsen (13025421), Wayne I. L. Davies (8028890), Rolf B. Edvardsen (6913946), Tomasz Furmanek (283506), Harald Sveier (8218770), Herve Migaud (308426), Jon Vidar Helvik (8028887)
Format: Still Image
Language:unknown
Published: 2022
Subjects:
Online Access:https://doi.org/10.1371/journal.pgen.1010529.g005
id ftunivfreestate:oai:figshare.com:article/21711981
record_format openpolar
spelling ftunivfreestate:oai:figshare.com:article/21711981 2023-05-15T15:32:13+02:00 Venn diagrams of Gene Ontologies (GO) comparing different photoperiods. Mariann Eilertsen (11502317) David W. P. Dolan (14247792) Charlotte M. Bolton (11780345) Rita Karlsen (13025421) Wayne I. L. Davies (8028890) Rolf B. Edvardsen (6913946) Tomasz Furmanek (283506) Harald Sveier (8218770) Herve Migaud (308426) Jon Vidar Helvik (8028887) 2022-12-12T18:22:53Z https://doi.org/10.1371/journal.pgen.1010529.g005 unknown https://figshare.com/articles/figure/Venn_diagrams_of_Gene_Ontologies_GO_comparing_different_photoperiods_/21711981 doi:10.1371/journal.pgen.1010529.g005 CC BY 4.0 CC-BY Microbiology Cell Biology Genetics Molecular Biology Neuroscience Physiology Ecology Developmental Biology Inorganic Chemistry Mental Health Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified salmo salar </ atlantic salmon (< complex photoreceptive system photoperiod </ p div >< p early developmental stages two clock genes several clock genes differing light conditions developing teleost prior circadian profile showed different light conditions constant white light constant conditions circadian profile clock genes white light light conditions constant light significantly different results showed present prior photoreceptive capacity developmental series expressed early early development light environment light condition green light many genes genes related genes associated transcriptomic response transcriptome profile study implies significantly cycling seasonal changes poorly differentiated Image Figure 2022 ftunivfreestate https://doi.org/10.1371/journal.pgen.1010529.g005 2022-12-16T00:33:50Z A) Upregulated GO terms comparing a constant lighting environment (DD or LL) to LDM revealed 7 common ontologies. In LL, 55 GO terms were upregulated (see S8 Table for a complete list). B) Downregulated GO terms comparing constant environment (DD or LL) to LDM, 10 common ontologies were found. Still Image Atlantic salmon Salmo salar KovsieScholar Repository (University of the Free State - UFS UV) Venn ENVELOPE(9.281,9.281,63.350,63.350)
institution Open Polar
collection KovsieScholar Repository (University of the Free State - UFS UV)
op_collection_id ftunivfreestate
language unknown
topic Microbiology
Cell Biology
Genetics
Molecular Biology
Neuroscience
Physiology
Ecology
Developmental Biology
Inorganic Chemistry
Mental Health
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
salmo salar </
atlantic salmon (<
complex photoreceptive system
photoperiod </ p
div >< p
early developmental stages
two clock genes
several clock genes
differing light conditions
developing teleost prior
circadian profile showed
different light conditions
constant white light
constant conditions
circadian profile
clock genes
white light
light conditions
constant light
significantly different
results showed
present prior
photoreceptive capacity
developmental series
expressed early
early development
light environment
light condition
green light
many genes
genes related
genes associated
transcriptomic response
transcriptome profile
study implies
significantly cycling
seasonal changes
poorly differentiated
spellingShingle Microbiology
Cell Biology
Genetics
Molecular Biology
Neuroscience
Physiology
Ecology
Developmental Biology
Inorganic Chemistry
Mental Health
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
salmo salar </
atlantic salmon (<
complex photoreceptive system
photoperiod </ p
div >< p
early developmental stages
two clock genes
several clock genes
differing light conditions
developing teleost prior
circadian profile showed
different light conditions
constant white light
constant conditions
circadian profile
clock genes
white light
light conditions
constant light
significantly different
results showed
present prior
photoreceptive capacity
developmental series
expressed early
early development
light environment
light condition
green light
many genes
genes related
genes associated
transcriptomic response
transcriptome profile
study implies
significantly cycling
seasonal changes
poorly differentiated
Mariann Eilertsen (11502317)
David W. P. Dolan (14247792)
Charlotte M. Bolton (11780345)
Rita Karlsen (13025421)
Wayne I. L. Davies (8028890)
Rolf B. Edvardsen (6913946)
Tomasz Furmanek (283506)
Harald Sveier (8218770)
Herve Migaud (308426)
Jon Vidar Helvik (8028887)
Venn diagrams of Gene Ontologies (GO) comparing different photoperiods.
topic_facet Microbiology
Cell Biology
Genetics
Molecular Biology
Neuroscience
Physiology
Ecology
Developmental Biology
Inorganic Chemistry
Mental Health
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
salmo salar </
atlantic salmon (<
complex photoreceptive system
photoperiod </ p
div >< p
early developmental stages
two clock genes
several clock genes
differing light conditions
developing teleost prior
circadian profile showed
different light conditions
constant white light
constant conditions
circadian profile
clock genes
white light
light conditions
constant light
significantly different
results showed
present prior
photoreceptive capacity
developmental series
expressed early
early development
light environment
light condition
green light
many genes
genes related
genes associated
transcriptomic response
transcriptome profile
study implies
significantly cycling
seasonal changes
poorly differentiated
description A) Upregulated GO terms comparing a constant lighting environment (DD or LL) to LDM revealed 7 common ontologies. In LL, 55 GO terms were upregulated (see S8 Table for a complete list). B) Downregulated GO terms comparing constant environment (DD or LL) to LDM, 10 common ontologies were found.
format Still Image
author Mariann Eilertsen (11502317)
David W. P. Dolan (14247792)
Charlotte M. Bolton (11780345)
Rita Karlsen (13025421)
Wayne I. L. Davies (8028890)
Rolf B. Edvardsen (6913946)
Tomasz Furmanek (283506)
Harald Sveier (8218770)
Herve Migaud (308426)
Jon Vidar Helvik (8028887)
author_facet Mariann Eilertsen (11502317)
David W. P. Dolan (14247792)
Charlotte M. Bolton (11780345)
Rita Karlsen (13025421)
Wayne I. L. Davies (8028890)
Rolf B. Edvardsen (6913946)
Tomasz Furmanek (283506)
Harald Sveier (8218770)
Herve Migaud (308426)
Jon Vidar Helvik (8028887)
author_sort Mariann Eilertsen (11502317)
title Venn diagrams of Gene Ontologies (GO) comparing different photoperiods.
title_short Venn diagrams of Gene Ontologies (GO) comparing different photoperiods.
title_full Venn diagrams of Gene Ontologies (GO) comparing different photoperiods.
title_fullStr Venn diagrams of Gene Ontologies (GO) comparing different photoperiods.
title_full_unstemmed Venn diagrams of Gene Ontologies (GO) comparing different photoperiods.
title_sort venn diagrams of gene ontologies (go) comparing different photoperiods.
publishDate 2022
url https://doi.org/10.1371/journal.pgen.1010529.g005
long_lat ENVELOPE(9.281,9.281,63.350,63.350)
geographic Venn
geographic_facet Venn
genre Atlantic salmon
Salmo salar
genre_facet Atlantic salmon
Salmo salar
op_relation https://figshare.com/articles/figure/Venn_diagrams_of_Gene_Ontologies_GO_comparing_different_photoperiods_/21711981
doi:10.1371/journal.pgen.1010529.g005
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1371/journal.pgen.1010529.g005
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