Bar chart comparing differentially expressed genes (DEGs) when 18:00 and 02:00 samples are combined.

Many genes are differentially expressed when comparing constant conditions (DD or LL) to LDM. Different intensities of white light had few DEGs when compared to each other. Comparing different wavelengths of light (LDB, LDG and LDR) to LDM gave many DEGs while few DEGs were apparent compared to DD,...

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Main Authors: Mariann Eilertsen (11502317), David W. P. Dolan (14247792), Charlotte M. Bolton (11780345), Rita Karlsen (13025421), Wayne I. L. Davies (8028890), Rolf B. Edvardsen (6913946), Tomasz Furmanek (283506), Harald Sveier (8218770), Herve Migaud (308426), Jon Vidar Helvik (8028887)
Format: Still Image
Language:unknown
Published: 2022
Subjects:
Online Access:https://doi.org/10.1371/journal.pgen.1010529.g004
id ftunivfreestate:oai:figshare.com:article/21711978
record_format openpolar
spelling ftunivfreestate:oai:figshare.com:article/21711978 2023-05-15T15:32:17+02:00 Bar chart comparing differentially expressed genes (DEGs) when 18:00 and 02:00 samples are combined. Mariann Eilertsen (11502317) David W. P. Dolan (14247792) Charlotte M. Bolton (11780345) Rita Karlsen (13025421) Wayne I. L. Davies (8028890) Rolf B. Edvardsen (6913946) Tomasz Furmanek (283506) Harald Sveier (8218770) Herve Migaud (308426) Jon Vidar Helvik (8028887) 2022-12-12T18:22:53Z https://doi.org/10.1371/journal.pgen.1010529.g004 unknown https://figshare.com/articles/figure/Bar_chart_comparing_differentially_expressed_genes_DEGs_when_18_00_and_02_00_samples_are_combined_/21711978 doi:10.1371/journal.pgen.1010529.g004 CC BY 4.0 CC-BY Microbiology Cell Biology Genetics Molecular Biology Neuroscience Physiology Ecology Developmental Biology Inorganic Chemistry Mental Health Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified salmo salar </ atlantic salmon (< complex photoreceptive system photoperiod </ p div >< p early developmental stages two clock genes several clock genes differing light conditions developing teleost prior circadian profile showed different light conditions constant white light constant conditions circadian profile clock genes white light light conditions constant light significantly different results showed present prior photoreceptive capacity developmental series expressed early early development light environment light condition green light many genes genes related genes associated transcriptomic response transcriptome profile study implies significantly cycling seasonal changes poorly differentiated Image Figure 2022 ftunivfreestate https://doi.org/10.1371/journal.pgen.1010529.g004 2022-12-16T00:33:50Z Many genes are differentially expressed when comparing constant conditions (DD or LL) to LDM. Different intensities of white light had few DEGs when compared to each other. Comparing different wavelengths of light (LDB, LDG and LDR) to LDM gave many DEGs while few DEGs were apparent compared to DD, LL or to each other. LL, LDB, LDG and LDR had the same intensity as LDM. Still Image Atlantic salmon Salmo salar KovsieScholar Repository (University of the Free State - UFS UV)
institution Open Polar
collection KovsieScholar Repository (University of the Free State - UFS UV)
op_collection_id ftunivfreestate
language unknown
topic Microbiology
Cell Biology
Genetics
Molecular Biology
Neuroscience
Physiology
Ecology
Developmental Biology
Inorganic Chemistry
Mental Health
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
salmo salar </
atlantic salmon (<
complex photoreceptive system
photoperiod </ p
div >< p
early developmental stages
two clock genes
several clock genes
differing light conditions
developing teleost prior
circadian profile showed
different light conditions
constant white light
constant conditions
circadian profile
clock genes
white light
light conditions
constant light
significantly different
results showed
present prior
photoreceptive capacity
developmental series
expressed early
early development
light environment
light condition
green light
many genes
genes related
genes associated
transcriptomic response
transcriptome profile
study implies
significantly cycling
seasonal changes
poorly differentiated
spellingShingle Microbiology
Cell Biology
Genetics
Molecular Biology
Neuroscience
Physiology
Ecology
Developmental Biology
Inorganic Chemistry
Mental Health
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
salmo salar </
atlantic salmon (<
complex photoreceptive system
photoperiod </ p
div >< p
early developmental stages
two clock genes
several clock genes
differing light conditions
developing teleost prior
circadian profile showed
different light conditions
constant white light
constant conditions
circadian profile
clock genes
white light
light conditions
constant light
significantly different
results showed
present prior
photoreceptive capacity
developmental series
expressed early
early development
light environment
light condition
green light
many genes
genes related
genes associated
transcriptomic response
transcriptome profile
study implies
significantly cycling
seasonal changes
poorly differentiated
Mariann Eilertsen (11502317)
David W. P. Dolan (14247792)
Charlotte M. Bolton (11780345)
Rita Karlsen (13025421)
Wayne I. L. Davies (8028890)
Rolf B. Edvardsen (6913946)
Tomasz Furmanek (283506)
Harald Sveier (8218770)
Herve Migaud (308426)
Jon Vidar Helvik (8028887)
Bar chart comparing differentially expressed genes (DEGs) when 18:00 and 02:00 samples are combined.
topic_facet Microbiology
Cell Biology
Genetics
Molecular Biology
Neuroscience
Physiology
Ecology
Developmental Biology
Inorganic Chemistry
Mental Health
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
salmo salar </
atlantic salmon (<
complex photoreceptive system
photoperiod </ p
div >< p
early developmental stages
two clock genes
several clock genes
differing light conditions
developing teleost prior
circadian profile showed
different light conditions
constant white light
constant conditions
circadian profile
clock genes
white light
light conditions
constant light
significantly different
results showed
present prior
photoreceptive capacity
developmental series
expressed early
early development
light environment
light condition
green light
many genes
genes related
genes associated
transcriptomic response
transcriptome profile
study implies
significantly cycling
seasonal changes
poorly differentiated
description Many genes are differentially expressed when comparing constant conditions (DD or LL) to LDM. Different intensities of white light had few DEGs when compared to each other. Comparing different wavelengths of light (LDB, LDG and LDR) to LDM gave many DEGs while few DEGs were apparent compared to DD, LL or to each other. LL, LDB, LDG and LDR had the same intensity as LDM.
format Still Image
author Mariann Eilertsen (11502317)
David W. P. Dolan (14247792)
Charlotte M. Bolton (11780345)
Rita Karlsen (13025421)
Wayne I. L. Davies (8028890)
Rolf B. Edvardsen (6913946)
Tomasz Furmanek (283506)
Harald Sveier (8218770)
Herve Migaud (308426)
Jon Vidar Helvik (8028887)
author_facet Mariann Eilertsen (11502317)
David W. P. Dolan (14247792)
Charlotte M. Bolton (11780345)
Rita Karlsen (13025421)
Wayne I. L. Davies (8028890)
Rolf B. Edvardsen (6913946)
Tomasz Furmanek (283506)
Harald Sveier (8218770)
Herve Migaud (308426)
Jon Vidar Helvik (8028887)
author_sort Mariann Eilertsen (11502317)
title Bar chart comparing differentially expressed genes (DEGs) when 18:00 and 02:00 samples are combined.
title_short Bar chart comparing differentially expressed genes (DEGs) when 18:00 and 02:00 samples are combined.
title_full Bar chart comparing differentially expressed genes (DEGs) when 18:00 and 02:00 samples are combined.
title_fullStr Bar chart comparing differentially expressed genes (DEGs) when 18:00 and 02:00 samples are combined.
title_full_unstemmed Bar chart comparing differentially expressed genes (DEGs) when 18:00 and 02:00 samples are combined.
title_sort bar chart comparing differentially expressed genes (degs) when 18:00 and 02:00 samples are combined.
publishDate 2022
url https://doi.org/10.1371/journal.pgen.1010529.g004
genre Atlantic salmon
Salmo salar
genre_facet Atlantic salmon
Salmo salar
op_relation https://figshare.com/articles/figure/Bar_chart_comparing_differentially_expressed_genes_DEGs_when_18_00_and_02_00_samples_are_combined_/21711978
doi:10.1371/journal.pgen.1010529.g004
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1371/journal.pgen.1010529.g004
_version_ 1766362807204315136