Bar chart comparing differentially expressed genes (DEGs).

The bar chart shows the number of DEGs within a light condition comparing the expression at 18:00 and 02:00 (within a condition), between conditions both at 18:00 and 02:00 (comparing to continuous darkness, DD), (comparing to continuous white light, LL) and (comparing to light-dark (LD) of white li...

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Main Authors: Mariann Eilertsen (11502317), David W. P. Dolan (14247792), Charlotte M. Bolton (11780345), Rita Karlsen (13025421), Wayne I. L. Davies (8028890), Rolf B. Edvardsen (6913946), Tomasz Furmanek (283506), Harald Sveier (8218770), Herve Migaud (308426), Jon Vidar Helvik (8028887)
Format: Still Image
Language:unknown
Published: 2022
Subjects:
Online Access:https://doi.org/10.1371/journal.pgen.1010529.g003
id ftunivfreestate:oai:figshare.com:article/21711975
record_format openpolar
spelling ftunivfreestate:oai:figshare.com:article/21711975 2023-05-15T15:32:36+02:00 Bar chart comparing differentially expressed genes (DEGs). Mariann Eilertsen (11502317) David W. P. Dolan (14247792) Charlotte M. Bolton (11780345) Rita Karlsen (13025421) Wayne I. L. Davies (8028890) Rolf B. Edvardsen (6913946) Tomasz Furmanek (283506) Harald Sveier (8218770) Herve Migaud (308426) Jon Vidar Helvik (8028887) 2022-12-12T18:22:53Z https://doi.org/10.1371/journal.pgen.1010529.g003 unknown https://figshare.com/articles/figure/Bar_chart_comparing_differentially_expressed_genes_DEGs_/21711975 doi:10.1371/journal.pgen.1010529.g003 CC BY 4.0 CC-BY Microbiology Cell Biology Genetics Molecular Biology Neuroscience Physiology Ecology Developmental Biology Inorganic Chemistry Mental Health Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified salmo salar </ atlantic salmon (< complex photoreceptive system photoperiod </ p div >< p early developmental stages two clock genes several clock genes differing light conditions developing teleost prior circadian profile showed different light conditions constant white light constant conditions circadian profile clock genes white light light conditions constant light significantly different results showed present prior photoreceptive capacity developmental series expressed early early development light environment light condition green light many genes genes related genes associated transcriptomic response transcriptome profile study implies significantly cycling seasonal changes poorly differentiated Image Figure 2022 ftunivfreestate https://doi.org/10.1371/journal.pgen.1010529.g003 2022-12-16T00:33:50Z The bar chart shows the number of DEGs within a light condition comparing the expression at 18:00 and 02:00 (within a condition), between conditions both at 18:00 and 02:00 (comparing to continuous darkness, DD), (comparing to continuous white light, LL) and (comparing to light-dark (LD) of white light of medium intensity, LDM). Few genes were differentially expressed within a condition at 18:00 and 02:00. Comparing the different light conditions to DD, LL or LDM revealed more DEGs 18.00 then 02:00. The color code within a condition is DD (black), LL (white), LDH (light grey), LDM (medium grey), LDL (dark grey), LDB (blue), LDG (green), LDR (red). In comparing to DD, LL and LDM the color at 18:00 is reflecting the condition being examined (as for within a condition), and at 02:00 it is black. Still Image Atlantic salmon Salmo salar KovsieScholar Repository (University of the Free State - UFS UV)
institution Open Polar
collection KovsieScholar Repository (University of the Free State - UFS UV)
op_collection_id ftunivfreestate
language unknown
topic Microbiology
Cell Biology
Genetics
Molecular Biology
Neuroscience
Physiology
Ecology
Developmental Biology
Inorganic Chemistry
Mental Health
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
salmo salar </
atlantic salmon (<
complex photoreceptive system
photoperiod </ p
div >< p
early developmental stages
two clock genes
several clock genes
differing light conditions
developing teleost prior
circadian profile showed
different light conditions
constant white light
constant conditions
circadian profile
clock genes
white light
light conditions
constant light
significantly different
results showed
present prior
photoreceptive capacity
developmental series
expressed early
early development
light environment
light condition
green light
many genes
genes related
genes associated
transcriptomic response
transcriptome profile
study implies
significantly cycling
seasonal changes
poorly differentiated
spellingShingle Microbiology
Cell Biology
Genetics
Molecular Biology
Neuroscience
Physiology
Ecology
Developmental Biology
Inorganic Chemistry
Mental Health
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
salmo salar </
atlantic salmon (<
complex photoreceptive system
photoperiod </ p
div >< p
early developmental stages
two clock genes
several clock genes
differing light conditions
developing teleost prior
circadian profile showed
different light conditions
constant white light
constant conditions
circadian profile
clock genes
white light
light conditions
constant light
significantly different
results showed
present prior
photoreceptive capacity
developmental series
expressed early
early development
light environment
light condition
green light
many genes
genes related
genes associated
transcriptomic response
transcriptome profile
study implies
significantly cycling
seasonal changes
poorly differentiated
Mariann Eilertsen (11502317)
David W. P. Dolan (14247792)
Charlotte M. Bolton (11780345)
Rita Karlsen (13025421)
Wayne I. L. Davies (8028890)
Rolf B. Edvardsen (6913946)
Tomasz Furmanek (283506)
Harald Sveier (8218770)
Herve Migaud (308426)
Jon Vidar Helvik (8028887)
Bar chart comparing differentially expressed genes (DEGs).
topic_facet Microbiology
Cell Biology
Genetics
Molecular Biology
Neuroscience
Physiology
Ecology
Developmental Biology
Inorganic Chemistry
Mental Health
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
salmo salar </
atlantic salmon (<
complex photoreceptive system
photoperiod </ p
div >< p
early developmental stages
two clock genes
several clock genes
differing light conditions
developing teleost prior
circadian profile showed
different light conditions
constant white light
constant conditions
circadian profile
clock genes
white light
light conditions
constant light
significantly different
results showed
present prior
photoreceptive capacity
developmental series
expressed early
early development
light environment
light condition
green light
many genes
genes related
genes associated
transcriptomic response
transcriptome profile
study implies
significantly cycling
seasonal changes
poorly differentiated
description The bar chart shows the number of DEGs within a light condition comparing the expression at 18:00 and 02:00 (within a condition), between conditions both at 18:00 and 02:00 (comparing to continuous darkness, DD), (comparing to continuous white light, LL) and (comparing to light-dark (LD) of white light of medium intensity, LDM). Few genes were differentially expressed within a condition at 18:00 and 02:00. Comparing the different light conditions to DD, LL or LDM revealed more DEGs 18.00 then 02:00. The color code within a condition is DD (black), LL (white), LDH (light grey), LDM (medium grey), LDL (dark grey), LDB (blue), LDG (green), LDR (red). In comparing to DD, LL and LDM the color at 18:00 is reflecting the condition being examined (as for within a condition), and at 02:00 it is black.
format Still Image
author Mariann Eilertsen (11502317)
David W. P. Dolan (14247792)
Charlotte M. Bolton (11780345)
Rita Karlsen (13025421)
Wayne I. L. Davies (8028890)
Rolf B. Edvardsen (6913946)
Tomasz Furmanek (283506)
Harald Sveier (8218770)
Herve Migaud (308426)
Jon Vidar Helvik (8028887)
author_facet Mariann Eilertsen (11502317)
David W. P. Dolan (14247792)
Charlotte M. Bolton (11780345)
Rita Karlsen (13025421)
Wayne I. L. Davies (8028890)
Rolf B. Edvardsen (6913946)
Tomasz Furmanek (283506)
Harald Sveier (8218770)
Herve Migaud (308426)
Jon Vidar Helvik (8028887)
author_sort Mariann Eilertsen (11502317)
title Bar chart comparing differentially expressed genes (DEGs).
title_short Bar chart comparing differentially expressed genes (DEGs).
title_full Bar chart comparing differentially expressed genes (DEGs).
title_fullStr Bar chart comparing differentially expressed genes (DEGs).
title_full_unstemmed Bar chart comparing differentially expressed genes (DEGs).
title_sort bar chart comparing differentially expressed genes (degs).
publishDate 2022
url https://doi.org/10.1371/journal.pgen.1010529.g003
genre Atlantic salmon
Salmo salar
genre_facet Atlantic salmon
Salmo salar
op_relation https://figshare.com/articles/figure/Bar_chart_comparing_differentially_expressed_genes_DEGs_/21711975
doi:10.1371/journal.pgen.1010529.g003
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1371/journal.pgen.1010529.g003
_version_ 1766363099838808064