The full component of nonvisual opsin genes found in the genome of Atlantic salmon.
The LOC-ID, Ensembl GeneID, chromosome location, strand and Ss4R duplication pair are included. Note that tmtopsin3a1 is not annotated and opn9 is incorrectly annotated in the Ensembl database. These genes are identified by LOC-ID. (XLSX)
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Online Access: | https://doi.org/10.1371/journal.pgen.1010529.s009 |
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ftunivfreestate:oai:figshare.com:article/21711948 2023-05-15T15:30:48+02:00 The full component of nonvisual opsin genes found in the genome of Atlantic salmon. Mariann Eilertsen (11502317) David W. P. Dolan (14247792) Charlotte M. Bolton (11780345) Rita Karlsen (13025421) Wayne I. L. Davies (8028890) Rolf B. Edvardsen (6913946) Tomasz Furmanek (283506) Harald Sveier (8218770) Herve Migaud (308426) Jon Vidar Helvik (8028887) 2022-12-12T18:22:53Z https://doi.org/10.1371/journal.pgen.1010529.s009 unknown https://figshare.com/articles/dataset/The_full_component_of_nonvisual_opsin_genes_found_in_the_genome_of_Atlantic_salmon_/21711948 doi:10.1371/journal.pgen.1010529.s009 CC BY 4.0 CC-BY Microbiology Cell Biology Genetics Molecular Biology Neuroscience Physiology Ecology Developmental Biology Inorganic Chemistry Mental Health Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified salmo salar </ atlantic salmon (< complex photoreceptive system photoperiod </ p div >< p early developmental stages two clock genes several clock genes differing light conditions developing teleost prior circadian profile showed different light conditions constant white light constant conditions circadian profile clock genes white light light conditions constant light significantly different results showed present prior photoreceptive capacity developmental series expressed early early development light environment light condition green light many genes genes related genes associated transcriptomic response transcriptome profile study implies significantly cycling seasonal changes poorly differentiated Dataset 2022 ftunivfreestate https://doi.org/10.1371/journal.pgen.1010529.s009 2022-12-16T00:33:53Z The LOC-ID, Ensembl GeneID, chromosome location, strand and Ss4R duplication pair are included. Note that tmtopsin3a1 is not annotated and opn9 is incorrectly annotated in the Ensembl database. These genes are identified by LOC-ID. (XLSX) Dataset Atlantic salmon Salmo salar KovsieScholar Repository (University of the Free State - UFS UV) |
institution |
Open Polar |
collection |
KovsieScholar Repository (University of the Free State - UFS UV) |
op_collection_id |
ftunivfreestate |
language |
unknown |
topic |
Microbiology Cell Biology Genetics Molecular Biology Neuroscience Physiology Ecology Developmental Biology Inorganic Chemistry Mental Health Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified salmo salar </ atlantic salmon (< complex photoreceptive system photoperiod </ p div >< p early developmental stages two clock genes several clock genes differing light conditions developing teleost prior circadian profile showed different light conditions constant white light constant conditions circadian profile clock genes white light light conditions constant light significantly different results showed present prior photoreceptive capacity developmental series expressed early early development light environment light condition green light many genes genes related genes associated transcriptomic response transcriptome profile study implies significantly cycling seasonal changes poorly differentiated |
spellingShingle |
Microbiology Cell Biology Genetics Molecular Biology Neuroscience Physiology Ecology Developmental Biology Inorganic Chemistry Mental Health Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified salmo salar </ atlantic salmon (< complex photoreceptive system photoperiod </ p div >< p early developmental stages two clock genes several clock genes differing light conditions developing teleost prior circadian profile showed different light conditions constant white light constant conditions circadian profile clock genes white light light conditions constant light significantly different results showed present prior photoreceptive capacity developmental series expressed early early development light environment light condition green light many genes genes related genes associated transcriptomic response transcriptome profile study implies significantly cycling seasonal changes poorly differentiated Mariann Eilertsen (11502317) David W. P. Dolan (14247792) Charlotte M. Bolton (11780345) Rita Karlsen (13025421) Wayne I. L. Davies (8028890) Rolf B. Edvardsen (6913946) Tomasz Furmanek (283506) Harald Sveier (8218770) Herve Migaud (308426) Jon Vidar Helvik (8028887) The full component of nonvisual opsin genes found in the genome of Atlantic salmon. |
topic_facet |
Microbiology Cell Biology Genetics Molecular Biology Neuroscience Physiology Ecology Developmental Biology Inorganic Chemistry Mental Health Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified salmo salar </ atlantic salmon (< complex photoreceptive system photoperiod </ p div >< p early developmental stages two clock genes several clock genes differing light conditions developing teleost prior circadian profile showed different light conditions constant white light constant conditions circadian profile clock genes white light light conditions constant light significantly different results showed present prior photoreceptive capacity developmental series expressed early early development light environment light condition green light many genes genes related genes associated transcriptomic response transcriptome profile study implies significantly cycling seasonal changes poorly differentiated |
description |
The LOC-ID, Ensembl GeneID, chromosome location, strand and Ss4R duplication pair are included. Note that tmtopsin3a1 is not annotated and opn9 is incorrectly annotated in the Ensembl database. These genes are identified by LOC-ID. (XLSX) |
format |
Dataset |
author |
Mariann Eilertsen (11502317) David W. P. Dolan (14247792) Charlotte M. Bolton (11780345) Rita Karlsen (13025421) Wayne I. L. Davies (8028890) Rolf B. Edvardsen (6913946) Tomasz Furmanek (283506) Harald Sveier (8218770) Herve Migaud (308426) Jon Vidar Helvik (8028887) |
author_facet |
Mariann Eilertsen (11502317) David W. P. Dolan (14247792) Charlotte M. Bolton (11780345) Rita Karlsen (13025421) Wayne I. L. Davies (8028890) Rolf B. Edvardsen (6913946) Tomasz Furmanek (283506) Harald Sveier (8218770) Herve Migaud (308426) Jon Vidar Helvik (8028887) |
author_sort |
Mariann Eilertsen (11502317) |
title |
The full component of nonvisual opsin genes found in the genome of Atlantic salmon. |
title_short |
The full component of nonvisual opsin genes found in the genome of Atlantic salmon. |
title_full |
The full component of nonvisual opsin genes found in the genome of Atlantic salmon. |
title_fullStr |
The full component of nonvisual opsin genes found in the genome of Atlantic salmon. |
title_full_unstemmed |
The full component of nonvisual opsin genes found in the genome of Atlantic salmon. |
title_sort |
full component of nonvisual opsin genes found in the genome of atlantic salmon. |
publishDate |
2022 |
url |
https://doi.org/10.1371/journal.pgen.1010529.s009 |
genre |
Atlantic salmon Salmo salar |
genre_facet |
Atlantic salmon Salmo salar |
op_relation |
https://figshare.com/articles/dataset/The_full_component_of_nonvisual_opsin_genes_found_in_the_genome_of_Atlantic_salmon_/21711948 doi:10.1371/journal.pgen.1010529.s009 |
op_rights |
CC BY 4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1371/journal.pgen.1010529.s009 |
_version_ |
1766361269306130432 |