Chodatodesmus australis sp. nov. (Scenedesmaceae, Chlorophyta) from Antarctica, with the emended description of the genus Chodatodesmus, and circumscription of Flechtneria rotunda gen. et sp. nov

The family Scenedesmaceae is a taxonomically complicated group due to its simple morphology, high phenotypic plasticity, and the presence of cryptic taxa. Over the years several taxonomic revisions, based on molecular data, affected the family. Here, we describe a new scenedesmacean species from Ant...

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Published in:Journal of Phycology
Main Authors: SCIUTO, KATIA, Lewis, Louise A., Verleyen, Elie, MORO, ISABELLA, LA ROCCA, NICOLETTA
Other Authors: Sciuto, Katia, Moro, Isabella, LA ROCCA, Nicoletta
Format: Article in Journal/Newspaper
Language:English
Published: 2015
Subjects:
Online Access:http://hdl.handle.net/11392/2472628
https://doi.org/10.1111/jpy.12355
https://onlinelibrary.wiley.com/doi/10.1111/jpy.12355
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author SCIUTO, KATIA
Lewis, Louise A.
Verleyen, Elie
MORO, ISABELLA
LA ROCCA, NICOLETTA
author2 Sciuto, Katia
Lewis, Louise A.
Verleyen, Elie
Moro, Isabella
LA ROCCA, Nicoletta
author_facet SCIUTO, KATIA
Lewis, Louise A.
Verleyen, Elie
MORO, ISABELLA
LA ROCCA, NICOLETTA
author_sort SCIUTO, KATIA
collection Università degli Studi di Ferrara: CINECA IRIS
container_issue 6
container_start_page 1172
container_title Journal of Phycology
container_volume 51
description The family Scenedesmaceae is a taxonomically complicated group due to its simple morphology, high phenotypic plasticity, and the presence of cryptic taxa. Over the years several taxonomic revisions, based on molecular data, affected the family. Here, we describe a new scenedesmacean species from Antarctica, Chodatodesmus australis, based on phylogenetic analyses of data from nuclear (ITS2 spacer, 18S rDNA), and plastid (rbcL, tufA) markers. Morphological (LM and SEM) and ultrastructural (TEM) observations, carried out both on the holotype of C. australis and on the generitype of Chodatodesmus, allow us to emend the original generic description of this genus. Our molecular and phylogenetic data also reveal the existence of a new monotypic genus, Flechtneria, inside the family Scenedesmaceae and lead to the taxonomic reassignment of some microalgal strains available in International Culture Collections to new taxa. Of the considered genomic regions, the tufA gene was the easiest to amplify and sequence and it showed the highest phylogenetic signal, even if the number of sequences already available for this marker in the public databases was considerably lower than for the other chosen loci. The rbcL gene also provided good phylogenetic signal, but its amplification and sequencing were generally more problematic. The nuclear markers gave lower phylogenetic signals, but the 18S rDNA allowed distinction at the genus level and the ITS2 spacer had the advantage that secondary structures could be considered in the analyses. The use of more than one molecular locus is suggested to obtain reliable results in the characterization of scenedesmacean strains.
format Article in Journal/Newspaper
genre Antarc*
Antarctica
genre_facet Antarc*
Antarctica
geographic Rotunda
geographic_facet Rotunda
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institution Open Polar
language English
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op_doi https://doi.org/10.1111/jpy.12355
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volume:51
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firstpage:1172
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journal:JOURNAL OF PHYCOLOGY
http://hdl.handle.net/11392/2472628
doi:10.1111/jpy.12355
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spelling ftunivferrarair:oai:iris.unife.it:11392/2472628 2025-01-16T19:38:07+00:00 Chodatodesmus australis sp. nov. (Scenedesmaceae, Chlorophyta) from Antarctica, with the emended description of the genus Chodatodesmus, and circumscription of Flechtneria rotunda gen. et sp. nov SCIUTO, KATIA Lewis, Louise A. Verleyen, Elie MORO, ISABELLA LA ROCCA, NICOLETTA Sciuto, Katia Lewis, Louise A. Verleyen, Elie Moro, Isabella LA ROCCA, Nicoletta 2015 ELETTRONICO http://hdl.handle.net/11392/2472628 https://doi.org/10.1111/jpy.12355 https://onlinelibrary.wiley.com/doi/10.1111/jpy.12355 eng eng info:eu-repo/semantics/altIdentifier/wos/WOS:000368433300015 volume:51 issue:6 firstpage:1172 lastpage:1188 numberofpages:17 journal:JOURNAL OF PHYCOLOGY http://hdl.handle.net/11392/2472628 doi:10.1111/jpy.12355 info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-84955177095 https://onlinelibrary.wiley.com/doi/10.1111/jpy.12355 info:eu-repo/semantics/closedAccess 18S rDNA Chodatodesmus australi Flechtneria rotunda ITS2 rbcL Scenedesmaceae tufA info:eu-repo/semantics/article 2015 ftunivferrarair https://doi.org/10.1111/jpy.12355 2024-01-17T17:41:13Z The family Scenedesmaceae is a taxonomically complicated group due to its simple morphology, high phenotypic plasticity, and the presence of cryptic taxa. Over the years several taxonomic revisions, based on molecular data, affected the family. Here, we describe a new scenedesmacean species from Antarctica, Chodatodesmus australis, based on phylogenetic analyses of data from nuclear (ITS2 spacer, 18S rDNA), and plastid (rbcL, tufA) markers. Morphological (LM and SEM) and ultrastructural (TEM) observations, carried out both on the holotype of C. australis and on the generitype of Chodatodesmus, allow us to emend the original generic description of this genus. Our molecular and phylogenetic data also reveal the existence of a new monotypic genus, Flechtneria, inside the family Scenedesmaceae and lead to the taxonomic reassignment of some microalgal strains available in International Culture Collections to new taxa. Of the considered genomic regions, the tufA gene was the easiest to amplify and sequence and it showed the highest phylogenetic signal, even if the number of sequences already available for this marker in the public databases was considerably lower than for the other chosen loci. The rbcL gene also provided good phylogenetic signal, but its amplification and sequencing were generally more problematic. The nuclear markers gave lower phylogenetic signals, but the 18S rDNA allowed distinction at the genus level and the ITS2 spacer had the advantage that secondary structures could be considered in the analyses. The use of more than one molecular locus is suggested to obtain reliable results in the characterization of scenedesmacean strains. Article in Journal/Newspaper Antarc* Antarctica Università degli Studi di Ferrara: CINECA IRIS Rotunda ENVELOPE(161.567,161.567,-78.017,-78.017) Journal of Phycology 51 6 1172 1188
spellingShingle 18S rDNA
Chodatodesmus australi
Flechtneria rotunda
ITS2
rbcL
Scenedesmaceae
tufA
SCIUTO, KATIA
Lewis, Louise A.
Verleyen, Elie
MORO, ISABELLA
LA ROCCA, NICOLETTA
Chodatodesmus australis sp. nov. (Scenedesmaceae, Chlorophyta) from Antarctica, with the emended description of the genus Chodatodesmus, and circumscription of Flechtneria rotunda gen. et sp. nov
title Chodatodesmus australis sp. nov. (Scenedesmaceae, Chlorophyta) from Antarctica, with the emended description of the genus Chodatodesmus, and circumscription of Flechtneria rotunda gen. et sp. nov
title_full Chodatodesmus australis sp. nov. (Scenedesmaceae, Chlorophyta) from Antarctica, with the emended description of the genus Chodatodesmus, and circumscription of Flechtneria rotunda gen. et sp. nov
title_fullStr Chodatodesmus australis sp. nov. (Scenedesmaceae, Chlorophyta) from Antarctica, with the emended description of the genus Chodatodesmus, and circumscription of Flechtneria rotunda gen. et sp. nov
title_full_unstemmed Chodatodesmus australis sp. nov. (Scenedesmaceae, Chlorophyta) from Antarctica, with the emended description of the genus Chodatodesmus, and circumscription of Flechtneria rotunda gen. et sp. nov
title_short Chodatodesmus australis sp. nov. (Scenedesmaceae, Chlorophyta) from Antarctica, with the emended description of the genus Chodatodesmus, and circumscription of Flechtneria rotunda gen. et sp. nov
title_sort chodatodesmus australis sp. nov. (scenedesmaceae, chlorophyta) from antarctica, with the emended description of the genus chodatodesmus, and circumscription of flechtneria rotunda gen. et sp. nov
topic 18S rDNA
Chodatodesmus australi
Flechtneria rotunda
ITS2
rbcL
Scenedesmaceae
tufA
topic_facet 18S rDNA
Chodatodesmus australi
Flechtneria rotunda
ITS2
rbcL
Scenedesmaceae
tufA
url http://hdl.handle.net/11392/2472628
https://doi.org/10.1111/jpy.12355
https://onlinelibrary.wiley.com/doi/10.1111/jpy.12355