Transcriptome analysis of cadmium exposure in kidney fibroblast cells of the North Atlantic Right Whale (Eubalaena glacialis)
An 8X15k oligonucleotide microarray was developed consisting of 2334 Eubalaena glacialis probes and 2166 Tursiops truncatus probes and used to measure the effects, at transcriptomic level, of cadmium exposure in right whale kidney fibroblast cells. Cells were exposed to three concentrations (1 μM, 0...
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ftunivferrarair:oai:iris.unife.it:11392/2453648 2024-02-11T10:02:22+01:00 Transcriptome analysis of cadmium exposure in kidney fibroblast cells of the North Atlantic Right Whale (Eubalaena glacialis) Ierardi J. L. Veloso A. Mancia A. Ierardi, J. L. Veloso, A. Mancia, A. 2021 STAMPA https://hdl.handle.net/11392/2453648 https://doi.org/10.1016/j.cbpc.2020.108946 https://www.sciencedirect.com/science/article/pii/S1532045620302465 eng eng info:eu-repo/semantics/altIdentifier/pmid/33285320 info:eu-repo/semantics/altIdentifier/wos/WOS:000624299700009 volume:242 firstpage:108946-1 lastpage:108946-10 numberofpages:10 journal:COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY. C. TOXICOLOGY & PHARMACOLOGY https://hdl.handle.net/11392/2453648 doi:10.1016/j.cbpc.2020.108946 info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-85097416633 https://www.sciencedirect.com/science/article/pii/S1532045620302465 info:eu-repo/semantics/closedAccess Baleen whale Cadmium toxicity Gene expression Heavy metal Kidney cell Mammals info:eu-repo/semantics/article 2021 ftunivferrarair https://doi.org/10.1016/j.cbpc.2020.108946 2024-01-17T17:40:16Z An 8X15k oligonucleotide microarray was developed consisting of 2334 Eubalaena glacialis probes and 2166 Tursiops truncatus probes and used to measure the effects, at transcriptomic level, of cadmium exposure in right whale kidney fibroblast cells. Cells were exposed to three concentrations (1 μM, 0.1 μM, and 0.01 μM) of cadmium chloride (CdCl2) for three exposure times (1, 4, and 24 h). Cells exposed to 1 μM CdCl2 for 4 h and 24 h showed upregulated genes involved in protection from metal toxicity and oxidative stress, protein renaturation, apoptosis inhibition, as well as several regulators of cellular processes. Downregulated genes represented a suite of functions including cell proliferation, transcription regulation, actin polymerization, and stress fiber synthesis. The collection of differentially expressed genes in this study support proposed mechanisms of cadmium-induced apoptosis such as ubiquitin proteasome system disruption, Ca2+ homeostasis interference, mitochondrial membrane potential collapse, reactive oxygen species (ROS) production, and cell cycle arrest. The results also have confirmed the right whale microarray as a reproducible tool in measuring differentiated gene expression that could be a valuable asset for transcriptome analysis of other baleen whales and potential health assessment protocols. Article in Journal/Newspaper baleen whale baleen whales Eubalaena glacialis North Atlantic North Atlantic right whale Università degli Studi di Ferrara: CINECA IRIS Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology 242 108946 |
institution |
Open Polar |
collection |
Università degli Studi di Ferrara: CINECA IRIS |
op_collection_id |
ftunivferrarair |
language |
English |
topic |
Baleen whale Cadmium toxicity Gene expression Heavy metal Kidney cell Mammals |
spellingShingle |
Baleen whale Cadmium toxicity Gene expression Heavy metal Kidney cell Mammals Ierardi J. L. Veloso A. Mancia A. Transcriptome analysis of cadmium exposure in kidney fibroblast cells of the North Atlantic Right Whale (Eubalaena glacialis) |
topic_facet |
Baleen whale Cadmium toxicity Gene expression Heavy metal Kidney cell Mammals |
description |
An 8X15k oligonucleotide microarray was developed consisting of 2334 Eubalaena glacialis probes and 2166 Tursiops truncatus probes and used to measure the effects, at transcriptomic level, of cadmium exposure in right whale kidney fibroblast cells. Cells were exposed to three concentrations (1 μM, 0.1 μM, and 0.01 μM) of cadmium chloride (CdCl2) for three exposure times (1, 4, and 24 h). Cells exposed to 1 μM CdCl2 for 4 h and 24 h showed upregulated genes involved in protection from metal toxicity and oxidative stress, protein renaturation, apoptosis inhibition, as well as several regulators of cellular processes. Downregulated genes represented a suite of functions including cell proliferation, transcription regulation, actin polymerization, and stress fiber synthesis. The collection of differentially expressed genes in this study support proposed mechanisms of cadmium-induced apoptosis such as ubiquitin proteasome system disruption, Ca2+ homeostasis interference, mitochondrial membrane potential collapse, reactive oxygen species (ROS) production, and cell cycle arrest. The results also have confirmed the right whale microarray as a reproducible tool in measuring differentiated gene expression that could be a valuable asset for transcriptome analysis of other baleen whales and potential health assessment protocols. |
author2 |
Ierardi, J. L. Veloso, A. Mancia, A. |
format |
Article in Journal/Newspaper |
author |
Ierardi J. L. Veloso A. Mancia A. |
author_facet |
Ierardi J. L. Veloso A. Mancia A. |
author_sort |
Ierardi J. L. |
title |
Transcriptome analysis of cadmium exposure in kidney fibroblast cells of the North Atlantic Right Whale (Eubalaena glacialis) |
title_short |
Transcriptome analysis of cadmium exposure in kidney fibroblast cells of the North Atlantic Right Whale (Eubalaena glacialis) |
title_full |
Transcriptome analysis of cadmium exposure in kidney fibroblast cells of the North Atlantic Right Whale (Eubalaena glacialis) |
title_fullStr |
Transcriptome analysis of cadmium exposure in kidney fibroblast cells of the North Atlantic Right Whale (Eubalaena glacialis) |
title_full_unstemmed |
Transcriptome analysis of cadmium exposure in kidney fibroblast cells of the North Atlantic Right Whale (Eubalaena glacialis) |
title_sort |
transcriptome analysis of cadmium exposure in kidney fibroblast cells of the north atlantic right whale (eubalaena glacialis) |
publishDate |
2021 |
url |
https://hdl.handle.net/11392/2453648 https://doi.org/10.1016/j.cbpc.2020.108946 https://www.sciencedirect.com/science/article/pii/S1532045620302465 |
genre |
baleen whale baleen whales Eubalaena glacialis North Atlantic North Atlantic right whale |
genre_facet |
baleen whale baleen whales Eubalaena glacialis North Atlantic North Atlantic right whale |
op_relation |
info:eu-repo/semantics/altIdentifier/pmid/33285320 info:eu-repo/semantics/altIdentifier/wos/WOS:000624299700009 volume:242 firstpage:108946-1 lastpage:108946-10 numberofpages:10 journal:COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY. C. TOXICOLOGY & PHARMACOLOGY https://hdl.handle.net/11392/2453648 doi:10.1016/j.cbpc.2020.108946 info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-85097416633 https://www.sciencedirect.com/science/article/pii/S1532045620302465 |
op_rights |
info:eu-repo/semantics/closedAccess |
op_doi |
https://doi.org/10.1016/j.cbpc.2020.108946 |
container_title |
Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology |
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242 |
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108946 |
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