Transcriptome analysis of cadmium exposure in kidney fibroblast cells of the North Atlantic Right Whale (Eubalaena glacialis)

An 8X15k oligonucleotide microarray was developed consisting of 2334 Eubalaena glacialis probes and 2166 Tursiops truncatus probes and used to measure the effects, at transcriptomic level, of cadmium exposure in right whale kidney fibroblast cells. Cells were exposed to three concentrations (1 μM, 0...

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Published in:Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology
Main Authors: Ierardi J. L., Veloso A., Mancia A.
Other Authors: Ierardi, J. L., Veloso, A., Mancia, A.
Format: Article in Journal/Newspaper
Language:English
Published: 2021
Subjects:
Online Access:https://hdl.handle.net/11392/2453648
https://doi.org/10.1016/j.cbpc.2020.108946
https://www.sciencedirect.com/science/article/pii/S1532045620302465
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spelling ftunivferrarair:oai:iris.unife.it:11392/2453648 2024-02-11T10:02:22+01:00 Transcriptome analysis of cadmium exposure in kidney fibroblast cells of the North Atlantic Right Whale (Eubalaena glacialis) Ierardi J. L. Veloso A. Mancia A. Ierardi, J. L. Veloso, A. Mancia, A. 2021 STAMPA https://hdl.handle.net/11392/2453648 https://doi.org/10.1016/j.cbpc.2020.108946 https://www.sciencedirect.com/science/article/pii/S1532045620302465 eng eng info:eu-repo/semantics/altIdentifier/pmid/33285320 info:eu-repo/semantics/altIdentifier/wos/WOS:000624299700009 volume:242 firstpage:108946-1 lastpage:108946-10 numberofpages:10 journal:COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY. C. TOXICOLOGY & PHARMACOLOGY https://hdl.handle.net/11392/2453648 doi:10.1016/j.cbpc.2020.108946 info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-85097416633 https://www.sciencedirect.com/science/article/pii/S1532045620302465 info:eu-repo/semantics/closedAccess Baleen whale Cadmium toxicity Gene expression Heavy metal Kidney cell Mammals info:eu-repo/semantics/article 2021 ftunivferrarair https://doi.org/10.1016/j.cbpc.2020.108946 2024-01-17T17:40:16Z An 8X15k oligonucleotide microarray was developed consisting of 2334 Eubalaena glacialis probes and 2166 Tursiops truncatus probes and used to measure the effects, at transcriptomic level, of cadmium exposure in right whale kidney fibroblast cells. Cells were exposed to three concentrations (1 μM, 0.1 μM, and 0.01 μM) of cadmium chloride (CdCl2) for three exposure times (1, 4, and 24 h). Cells exposed to 1 μM CdCl2 for 4 h and 24 h showed upregulated genes involved in protection from metal toxicity and oxidative stress, protein renaturation, apoptosis inhibition, as well as several regulators of cellular processes. Downregulated genes represented a suite of functions including cell proliferation, transcription regulation, actin polymerization, and stress fiber synthesis. The collection of differentially expressed genes in this study support proposed mechanisms of cadmium-induced apoptosis such as ubiquitin proteasome system disruption, Ca2+ homeostasis interference, mitochondrial membrane potential collapse, reactive oxygen species (ROS) production, and cell cycle arrest. The results also have confirmed the right whale microarray as a reproducible tool in measuring differentiated gene expression that could be a valuable asset for transcriptome analysis of other baleen whales and potential health assessment protocols. Article in Journal/Newspaper baleen whale baleen whales Eubalaena glacialis North Atlantic North Atlantic right whale Università degli Studi di Ferrara: CINECA IRIS Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology 242 108946
institution Open Polar
collection Università degli Studi di Ferrara: CINECA IRIS
op_collection_id ftunivferrarair
language English
topic Baleen whale
Cadmium toxicity
Gene expression
Heavy metal
Kidney cell
Mammals
spellingShingle Baleen whale
Cadmium toxicity
Gene expression
Heavy metal
Kidney cell
Mammals
Ierardi J. L.
Veloso A.
Mancia A.
Transcriptome analysis of cadmium exposure in kidney fibroblast cells of the North Atlantic Right Whale (Eubalaena glacialis)
topic_facet Baleen whale
Cadmium toxicity
Gene expression
Heavy metal
Kidney cell
Mammals
description An 8X15k oligonucleotide microarray was developed consisting of 2334 Eubalaena glacialis probes and 2166 Tursiops truncatus probes and used to measure the effects, at transcriptomic level, of cadmium exposure in right whale kidney fibroblast cells. Cells were exposed to three concentrations (1 μM, 0.1 μM, and 0.01 μM) of cadmium chloride (CdCl2) for three exposure times (1, 4, and 24 h). Cells exposed to 1 μM CdCl2 for 4 h and 24 h showed upregulated genes involved in protection from metal toxicity and oxidative stress, protein renaturation, apoptosis inhibition, as well as several regulators of cellular processes. Downregulated genes represented a suite of functions including cell proliferation, transcription regulation, actin polymerization, and stress fiber synthesis. The collection of differentially expressed genes in this study support proposed mechanisms of cadmium-induced apoptosis such as ubiquitin proteasome system disruption, Ca2+ homeostasis interference, mitochondrial membrane potential collapse, reactive oxygen species (ROS) production, and cell cycle arrest. The results also have confirmed the right whale microarray as a reproducible tool in measuring differentiated gene expression that could be a valuable asset for transcriptome analysis of other baleen whales and potential health assessment protocols.
author2 Ierardi, J. L.
Veloso, A.
Mancia, A.
format Article in Journal/Newspaper
author Ierardi J. L.
Veloso A.
Mancia A.
author_facet Ierardi J. L.
Veloso A.
Mancia A.
author_sort Ierardi J. L.
title Transcriptome analysis of cadmium exposure in kidney fibroblast cells of the North Atlantic Right Whale (Eubalaena glacialis)
title_short Transcriptome analysis of cadmium exposure in kidney fibroblast cells of the North Atlantic Right Whale (Eubalaena glacialis)
title_full Transcriptome analysis of cadmium exposure in kidney fibroblast cells of the North Atlantic Right Whale (Eubalaena glacialis)
title_fullStr Transcriptome analysis of cadmium exposure in kidney fibroblast cells of the North Atlantic Right Whale (Eubalaena glacialis)
title_full_unstemmed Transcriptome analysis of cadmium exposure in kidney fibroblast cells of the North Atlantic Right Whale (Eubalaena glacialis)
title_sort transcriptome analysis of cadmium exposure in kidney fibroblast cells of the north atlantic right whale (eubalaena glacialis)
publishDate 2021
url https://hdl.handle.net/11392/2453648
https://doi.org/10.1016/j.cbpc.2020.108946
https://www.sciencedirect.com/science/article/pii/S1532045620302465
genre baleen whale
baleen whales
Eubalaena glacialis
North Atlantic
North Atlantic right whale
genre_facet baleen whale
baleen whales
Eubalaena glacialis
North Atlantic
North Atlantic right whale
op_relation info:eu-repo/semantics/altIdentifier/pmid/33285320
info:eu-repo/semantics/altIdentifier/wos/WOS:000624299700009
volume:242
firstpage:108946-1
lastpage:108946-10
numberofpages:10
journal:COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY. C. TOXICOLOGY & PHARMACOLOGY
https://hdl.handle.net/11392/2453648
doi:10.1016/j.cbpc.2020.108946
info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-85097416633
https://www.sciencedirect.com/science/article/pii/S1532045620302465
op_rights info:eu-repo/semantics/closedAccess
op_doi https://doi.org/10.1016/j.cbpc.2020.108946
container_title Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology
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