Ca2+-stabilized adhesin helps an Antarctic bacterium reach out and bind ice

The large size of a 1.5-MDa ice-binding adhesin [MpAFP (Marinomonas primoryensis antifreeze protein)] from an Antarctic Gram-negative bacterium, M. primoryensis, is mainly due to its highly repetitive RII (Region II). MpAFP-RII contains roughly 120 tandem copies of an identical 104-residue repeat. W...

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Main Authors: Vance, TDR, Olijve, LLC Luuk, Campbell, RL, Voets, IK Ilja, Davies, Peter L, Guo, S
Format: Article in Journal/Newspaper
Language:English
Published: 2014
Subjects:
Online Access:http://repository.tue.nl/886554
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record_format openpolar
spelling ftuniveindhoven:oai:library.tue.nl:886554 2023-05-15T13:36:50+02:00 Ca2+-stabilized adhesin helps an Antarctic bacterium reach out and bind ice Vance, TDR Olijve, LLC Luuk Campbell, RL Voets, IK Ilja Davies, Peter L Guo, S 2014 application/pdf http://repository.tue.nl/886554 en eng Copyright (c) Vance, TDR Copyright (c) Olijve, LLC Luuk Copyright (c) Campbell, RL Copyright (c) Voets, IK Ilja Copyright (c) Davies, Peter L Copyright (c) Guo, S ISSN:0144-8463 Article / Letter to the editor 2014 ftuniveindhoven 2019-08-14T22:09:16Z The large size of a 1.5-MDa ice-binding adhesin [MpAFP (Marinomonas primoryensis antifreeze protein)] from an Antarctic Gram-negative bacterium, M. primoryensis, is mainly due to its highly repetitive RII (Region II). MpAFP-RII contains roughly 120 tandem copies of an identical 104-residue repeat. We have previously determined that a single RII repeat folds as a Ca 2+ - dependent immunoglobulin-like domain. Here, we solved the crystal structure of RII tetra-tandemer (four tandem RII repeats) to a resolution of 1.8 Å. The RII tetra-tandemer reveals an extended (∼190-Å x ∼25-Å), rod-like structure with four RII-repeats aligned in series with each other. The inter-repeat regions of the RII tetra-tandemer are strengthened by Ca 2+ bound to acidic residues. SAXS (small-angle X-ray scattering) profiles indicate the RII tetra-tandemer is significantly rigidified upon Ca 2+ binding, and that the protein's solution structure is in excellent agreement with its crystal structure. We hypothesize that >600 Ca 2+ help rigidify the chain of ∼120 104-residue repeats to form a ∼0.6 μm rod-like structure in order to project the ice-binding domain of MpAFP away from the bacterial cell surface. The proposed extender role of RII can help the strictly aerobic, motile bacterium bind ice in the upper reaches of the Antarctic lake where oxygen and nutrients are most abundant. Ca 2+ -induced rigidity of tandem Ig-like repeats in large adhesins might be a general mechanism used by bacteria to bind to their substrates and help colonize specific niches. Article in Journal/Newspaper Antarc* Antarctic Eindhoven University of Technology (TU/e): Research Portal Antarctic The Antarctic
institution Open Polar
collection Eindhoven University of Technology (TU/e): Research Portal
op_collection_id ftuniveindhoven
language English
description The large size of a 1.5-MDa ice-binding adhesin [MpAFP (Marinomonas primoryensis antifreeze protein)] from an Antarctic Gram-negative bacterium, M. primoryensis, is mainly due to its highly repetitive RII (Region II). MpAFP-RII contains roughly 120 tandem copies of an identical 104-residue repeat. We have previously determined that a single RII repeat folds as a Ca 2+ - dependent immunoglobulin-like domain. Here, we solved the crystal structure of RII tetra-tandemer (four tandem RII repeats) to a resolution of 1.8 Å. The RII tetra-tandemer reveals an extended (∼190-Å x ∼25-Å), rod-like structure with four RII-repeats aligned in series with each other. The inter-repeat regions of the RII tetra-tandemer are strengthened by Ca 2+ bound to acidic residues. SAXS (small-angle X-ray scattering) profiles indicate the RII tetra-tandemer is significantly rigidified upon Ca 2+ binding, and that the protein's solution structure is in excellent agreement with its crystal structure. We hypothesize that >600 Ca 2+ help rigidify the chain of ∼120 104-residue repeats to form a ∼0.6 μm rod-like structure in order to project the ice-binding domain of MpAFP away from the bacterial cell surface. The proposed extender role of RII can help the strictly aerobic, motile bacterium bind ice in the upper reaches of the Antarctic lake where oxygen and nutrients are most abundant. Ca 2+ -induced rigidity of tandem Ig-like repeats in large adhesins might be a general mechanism used by bacteria to bind to their substrates and help colonize specific niches.
format Article in Journal/Newspaper
author Vance, TDR
Olijve, LLC Luuk
Campbell, RL
Voets, IK Ilja
Davies, Peter L
Guo, S
spellingShingle Vance, TDR
Olijve, LLC Luuk
Campbell, RL
Voets, IK Ilja
Davies, Peter L
Guo, S
Ca2+-stabilized adhesin helps an Antarctic bacterium reach out and bind ice
author_facet Vance, TDR
Olijve, LLC Luuk
Campbell, RL
Voets, IK Ilja
Davies, Peter L
Guo, S
author_sort Vance, TDR
title Ca2+-stabilized adhesin helps an Antarctic bacterium reach out and bind ice
title_short Ca2+-stabilized adhesin helps an Antarctic bacterium reach out and bind ice
title_full Ca2+-stabilized adhesin helps an Antarctic bacterium reach out and bind ice
title_fullStr Ca2+-stabilized adhesin helps an Antarctic bacterium reach out and bind ice
title_full_unstemmed Ca2+-stabilized adhesin helps an Antarctic bacterium reach out and bind ice
title_sort ca2+-stabilized adhesin helps an antarctic bacterium reach out and bind ice
publishDate 2014
url http://repository.tue.nl/886554
geographic Antarctic
The Antarctic
geographic_facet Antarctic
The Antarctic
genre Antarc*
Antarctic
genre_facet Antarc*
Antarctic
op_source ISSN:0144-8463
op_rights Copyright (c) Vance, TDR
Copyright (c) Olijve, LLC Luuk
Copyright (c) Campbell, RL
Copyright (c) Voets, IK Ilja
Copyright (c) Davies, Peter L
Copyright (c) Guo, S
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