Next-generation transcriptome characterization in three Nacella species (Patellogastropoda: Nacellidae) from South America and Antarctica
The southern tip of South America and Antarctica are particularly interesting due to many genera and also species currently sharing between both areas. The genus Nacella (Patellogastropoda: Nacellidae) is distributed in different regions of South America and Antarctica living preferentially on rocks...
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ftunivchile:oai:repositorio.uchile.cl:2250/153949 2023-05-15T13:56:31+02:00 Next-generation transcriptome characterization in three Nacella species (Patellogastropoda: Nacellidae) from South America and Antarctica Fuenzalida, Gonzalo Poulin, Elie González Wevar, Claudio Molina, Cristian Cardenas, Leyla 2014 application/pdf https://doi.org/10.1016/j.margen.2014.06.004 https://repositorio.uchile.cl/handle/2250/153949 en eng Elsevier Marine Genomics 18 (2014) 89–91 18747787 doi:10.1016/j.margen.2014.06.004 https://repositorio.uchile.cl/handle/2250/153949 Attribution-NonCommercial-NoDerivs 3.0 Chile http://creativecommons.org/licenses/by-nc-nd/3.0/cl/ CC-BY-NC-ND Marine Genomics Antarctica Comparative transcriptome Patellogastropods Pyrosequencing South America Artículo de revista 2014 ftunivchile https://doi.org/10.1016/j.margen.2014.06.004 2023-01-22T01:02:00Z The southern tip of South America and Antarctica are particularly interesting due to many genera and also species currently sharing between both areas. The genus Nacella (Patellogastropoda: Nacellidae) is distributed in different regions of South America and Antarctica living preferentially on rocks and boulders and grazing on algae, diatoms and bacterial films. We described the transcriptomes of three Nacella species, Nacella concinna (Strebel, 1908), inhabiting the Antarctic Peninsula; Nacella magallanica (Gmelin, 1791), from Patagonia and Nacella clypeater (Lesson, 1831), from central Chile. In total, we obtained over 20,000 contigs with an average length of 583 bp. Homologous protein coding genes (PCGs) for mitochondrial genome of the three species were characterized and a database of molecular markers was also generated. This study represents the first publicly available report on pyrosequencing data for patellogastropod species, and provides an important comparative resource for studies in ecophysiology and evolutionary adaptation in marine invertebrate species Article in Journal/Newspaper Antarc* Antarctic Antarctic Peninsula Antarctica Universidad de Chile: Repositorio académico Antarctic The Antarctic Antarctic Peninsula Patagonia Nacella ENVELOPE(-60.783,-60.783,-62.467,-62.467) Marine Genomics 18 89 91 |
institution |
Open Polar |
collection |
Universidad de Chile: Repositorio académico |
op_collection_id |
ftunivchile |
language |
English |
topic |
Antarctica Comparative transcriptome Patellogastropods Pyrosequencing South America |
spellingShingle |
Antarctica Comparative transcriptome Patellogastropods Pyrosequencing South America Fuenzalida, Gonzalo Poulin, Elie González Wevar, Claudio Molina, Cristian Cardenas, Leyla Next-generation transcriptome characterization in three Nacella species (Patellogastropoda: Nacellidae) from South America and Antarctica |
topic_facet |
Antarctica Comparative transcriptome Patellogastropods Pyrosequencing South America |
description |
The southern tip of South America and Antarctica are particularly interesting due to many genera and also species currently sharing between both areas. The genus Nacella (Patellogastropoda: Nacellidae) is distributed in different regions of South America and Antarctica living preferentially on rocks and boulders and grazing on algae, diatoms and bacterial films. We described the transcriptomes of three Nacella species, Nacella concinna (Strebel, 1908), inhabiting the Antarctic Peninsula; Nacella magallanica (Gmelin, 1791), from Patagonia and Nacella clypeater (Lesson, 1831), from central Chile. In total, we obtained over 20,000 contigs with an average length of 583 bp. Homologous protein coding genes (PCGs) for mitochondrial genome of the three species were characterized and a database of molecular markers was also generated. This study represents the first publicly available report on pyrosequencing data for patellogastropod species, and provides an important comparative resource for studies in ecophysiology and evolutionary adaptation in marine invertebrate species |
format |
Article in Journal/Newspaper |
author |
Fuenzalida, Gonzalo Poulin, Elie González Wevar, Claudio Molina, Cristian Cardenas, Leyla |
author_facet |
Fuenzalida, Gonzalo Poulin, Elie González Wevar, Claudio Molina, Cristian Cardenas, Leyla |
author_sort |
Fuenzalida, Gonzalo |
title |
Next-generation transcriptome characterization in three Nacella species (Patellogastropoda: Nacellidae) from South America and Antarctica |
title_short |
Next-generation transcriptome characterization in three Nacella species (Patellogastropoda: Nacellidae) from South America and Antarctica |
title_full |
Next-generation transcriptome characterization in three Nacella species (Patellogastropoda: Nacellidae) from South America and Antarctica |
title_fullStr |
Next-generation transcriptome characterization in three Nacella species (Patellogastropoda: Nacellidae) from South America and Antarctica |
title_full_unstemmed |
Next-generation transcriptome characterization in three Nacella species (Patellogastropoda: Nacellidae) from South America and Antarctica |
title_sort |
next-generation transcriptome characterization in three nacella species (patellogastropoda: nacellidae) from south america and antarctica |
publisher |
Elsevier |
publishDate |
2014 |
url |
https://doi.org/10.1016/j.margen.2014.06.004 https://repositorio.uchile.cl/handle/2250/153949 |
long_lat |
ENVELOPE(-60.783,-60.783,-62.467,-62.467) |
geographic |
Antarctic The Antarctic Antarctic Peninsula Patagonia Nacella |
geographic_facet |
Antarctic The Antarctic Antarctic Peninsula Patagonia Nacella |
genre |
Antarc* Antarctic Antarctic Peninsula Antarctica |
genre_facet |
Antarc* Antarctic Antarctic Peninsula Antarctica |
op_source |
Marine Genomics |
op_relation |
Marine Genomics 18 (2014) 89–91 18747787 doi:10.1016/j.margen.2014.06.004 https://repositorio.uchile.cl/handle/2250/153949 |
op_rights |
Attribution-NonCommercial-NoDerivs 3.0 Chile http://creativecommons.org/licenses/by-nc-nd/3.0/cl/ |
op_rightsnorm |
CC-BY-NC-ND |
op_doi |
https://doi.org/10.1016/j.margen.2014.06.004 |
container_title |
Marine Genomics |
container_volume |
18 |
container_start_page |
89 |
op_container_end_page |
91 |
_version_ |
1766264019586383872 |