Crystal structure of fuculose aldolase from the Antarctic psychrophilic yeastGlaciozyma antarctica PI12
Fuculose-1-phosphate aldolase (FucA) catalyses the reversible cleavage of L-fuculose 1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. This enzyme from mesophiles and thermophiles has been extensively studied; however, there is no report on this enzyme from a psychrophile. In this...
Published in: | Acta Crystallographica Section F Structural Biology Communications |
---|---|
Main Authors: | , , , , , , , , |
Format: | Article in Journal/Newspaper |
Language: | English |
Published: |
International Union of Crystallography
2016
|
Subjects: | |
Online Access: | https://orca.cardiff.ac.uk/id/eprint/102231/ https://doi.org/10.1107/S2053230X16015612 https://orca.cardiff.ac.uk/id/eprint/102231/1/Crystal%20structure%20fuculose%20Rossjohn-Jaafar.pdf |
id |
ftunivcardiff:oai:https://orca.cardiff.ac.uk:102231 |
---|---|
record_format |
openpolar |
spelling |
ftunivcardiff:oai:https://orca.cardiff.ac.uk:102231 2023-12-17T10:22:18+01:00 Crystal structure of fuculose aldolase from the Antarctic psychrophilic yeastGlaciozyma antarctica PI12 Jaafar, Nardiah Rizwana Littler, Dene Beddoe, Travis Rossjohn, Jamie Illias, Rosli Md Mahadi, Nor Muhammad Mackeen, Mukram Mohamed Murad, Abdul Munir Abdul Abu Bakar, Farah Diba 2016-10-27 application/pdf https://orca.cardiff.ac.uk/id/eprint/102231/ https://doi.org/10.1107/S2053230X16015612 https://orca.cardiff.ac.uk/id/eprint/102231/1/Crystal%20structure%20fuculose%20Rossjohn-Jaafar.pdf en eng International Union of Crystallography https://orca.cardiff.ac.uk/id/eprint/102231/1/Crystal%20structure%20fuculose%20Rossjohn-Jaafar.pdf Jaafar, Nardiah Rizwana, Littler, Dene, Beddoe, Travis, Rossjohn, Jamie https://orca.cardiff.ac.uk/view/cardiffauthors/A290945F.html orcid:0000-0002-2020-7522 orcid:0000-0002-2020-7522, Illias, Rosli Md, Mahadi, Nor Muhammad, Mackeen, Mukram Mohamed, Murad, Abdul Munir Abdul and Abu Bakar, Farah Diba 2016. Crystal structure of fuculose aldolase from the Antarctic psychrophilic yeastGlaciozyma antarctica PI12. Acta Crystallographica Section F Structural Biology Communications 72 (11) , pp. 831-839. 10.1107/S2053230X16015612 https://doi.org/10.1107/S2053230X16015612 file https://orca.cardiff.ac.uk/id/eprint/102231/1/Crystal%20structure%20fuculose%20Rossjohn-Jaafar.pdf doi:10.1107/S2053230X16015612 Article PeerReviewed 2016 ftunivcardiff https://doi.org/10.1107/S2053230X16015612 2023-11-23T23:33:32Z Fuculose-1-phosphate aldolase (FucA) catalyses the reversible cleavage of L-fuculose 1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. This enzyme from mesophiles and thermophiles has been extensively studied; however, there is no report on this enzyme from a psychrophile. In this study, the gene encoding FucA from Glaciozyma antarctica PI12 (GaFucA) was cloned and the enzyme was overexpressed in Escherichia coli, purified and crystallized. The tetrameric structure of GaFucA was determined to 1.34 Å resolution. The overall architecture of GaFucA and its catalytically essential histidine triad are highly conserved among other fuculose aldolases. Comparisons of structural features between GaFucA and its mesophilic and thermophilic homologues revealed that the enzyme has typical psychrophilic attributes, indicated by the presence of a high number of nonpolar residues at the surface and a lower number of arginine residues. Article in Journal/Newspaper Antarc* Antarctic Antarctica Cardiff University: ORCA (Online Research @ Cardiff) Antarctic The Antarctic Acta Crystallographica Section F Structural Biology Communications 72 11 831 839 |
institution |
Open Polar |
collection |
Cardiff University: ORCA (Online Research @ Cardiff) |
op_collection_id |
ftunivcardiff |
language |
English |
description |
Fuculose-1-phosphate aldolase (FucA) catalyses the reversible cleavage of L-fuculose 1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. This enzyme from mesophiles and thermophiles has been extensively studied; however, there is no report on this enzyme from a psychrophile. In this study, the gene encoding FucA from Glaciozyma antarctica PI12 (GaFucA) was cloned and the enzyme was overexpressed in Escherichia coli, purified and crystallized. The tetrameric structure of GaFucA was determined to 1.34 Å resolution. The overall architecture of GaFucA and its catalytically essential histidine triad are highly conserved among other fuculose aldolases. Comparisons of structural features between GaFucA and its mesophilic and thermophilic homologues revealed that the enzyme has typical psychrophilic attributes, indicated by the presence of a high number of nonpolar residues at the surface and a lower number of arginine residues. |
format |
Article in Journal/Newspaper |
author |
Jaafar, Nardiah Rizwana Littler, Dene Beddoe, Travis Rossjohn, Jamie Illias, Rosli Md Mahadi, Nor Muhammad Mackeen, Mukram Mohamed Murad, Abdul Munir Abdul Abu Bakar, Farah Diba |
spellingShingle |
Jaafar, Nardiah Rizwana Littler, Dene Beddoe, Travis Rossjohn, Jamie Illias, Rosli Md Mahadi, Nor Muhammad Mackeen, Mukram Mohamed Murad, Abdul Munir Abdul Abu Bakar, Farah Diba Crystal structure of fuculose aldolase from the Antarctic psychrophilic yeastGlaciozyma antarctica PI12 |
author_facet |
Jaafar, Nardiah Rizwana Littler, Dene Beddoe, Travis Rossjohn, Jamie Illias, Rosli Md Mahadi, Nor Muhammad Mackeen, Mukram Mohamed Murad, Abdul Munir Abdul Abu Bakar, Farah Diba |
author_sort |
Jaafar, Nardiah Rizwana |
title |
Crystal structure of fuculose aldolase from the Antarctic psychrophilic yeastGlaciozyma antarctica PI12 |
title_short |
Crystal structure of fuculose aldolase from the Antarctic psychrophilic yeastGlaciozyma antarctica PI12 |
title_full |
Crystal structure of fuculose aldolase from the Antarctic psychrophilic yeastGlaciozyma antarctica PI12 |
title_fullStr |
Crystal structure of fuculose aldolase from the Antarctic psychrophilic yeastGlaciozyma antarctica PI12 |
title_full_unstemmed |
Crystal structure of fuculose aldolase from the Antarctic psychrophilic yeastGlaciozyma antarctica PI12 |
title_sort |
crystal structure of fuculose aldolase from the antarctic psychrophilic yeastglaciozyma antarctica pi12 |
publisher |
International Union of Crystallography |
publishDate |
2016 |
url |
https://orca.cardiff.ac.uk/id/eprint/102231/ https://doi.org/10.1107/S2053230X16015612 https://orca.cardiff.ac.uk/id/eprint/102231/1/Crystal%20structure%20fuculose%20Rossjohn-Jaafar.pdf |
geographic |
Antarctic The Antarctic |
geographic_facet |
Antarctic The Antarctic |
genre |
Antarc* Antarctic Antarctica |
genre_facet |
Antarc* Antarctic Antarctica |
op_relation |
https://orca.cardiff.ac.uk/id/eprint/102231/1/Crystal%20structure%20fuculose%20Rossjohn-Jaafar.pdf Jaafar, Nardiah Rizwana, Littler, Dene, Beddoe, Travis, Rossjohn, Jamie https://orca.cardiff.ac.uk/view/cardiffauthors/A290945F.html orcid:0000-0002-2020-7522 orcid:0000-0002-2020-7522, Illias, Rosli Md, Mahadi, Nor Muhammad, Mackeen, Mukram Mohamed, Murad, Abdul Munir Abdul and Abu Bakar, Farah Diba 2016. Crystal structure of fuculose aldolase from the Antarctic psychrophilic yeastGlaciozyma antarctica PI12. Acta Crystallographica Section F Structural Biology Communications 72 (11) , pp. 831-839. 10.1107/S2053230X16015612 https://doi.org/10.1107/S2053230X16015612 file https://orca.cardiff.ac.uk/id/eprint/102231/1/Crystal%20structure%20fuculose%20Rossjohn-Jaafar.pdf doi:10.1107/S2053230X16015612 |
op_doi |
https://doi.org/10.1107/S2053230X16015612 |
container_title |
Acta Crystallographica Section F Structural Biology Communications |
container_volume |
72 |
container_issue |
11 |
container_start_page |
831 |
op_container_end_page |
839 |
_version_ |
1785546100953841664 |