Crystal structure of fuculose aldolase from the Antarctic psychrophilic yeastGlaciozyma antarctica PI12

Fuculose-1-phosphate aldolase (FucA) catalyses the reversible cleavage of L-fuculose 1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. This enzyme from mesophiles and thermophiles has been extensively studied; however, there is no report on this enzyme from a psychrophile. In this...

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Published in:Acta Crystallographica Section F Structural Biology Communications
Main Authors: Jaafar, Nardiah Rizwana, Littler, Dene, Beddoe, Travis, Rossjohn, Jamie, Illias, Rosli Md, Mahadi, Nor Muhammad, Mackeen, Mukram Mohamed, Murad, Abdul Munir Abdul, Abu Bakar, Farah Diba
Format: Article in Journal/Newspaper
Language:English
Published: International Union of Crystallography 2016
Subjects:
Online Access:https://orca.cardiff.ac.uk/id/eprint/102231/
https://doi.org/10.1107/S2053230X16015612
https://orca.cardiff.ac.uk/id/eprint/102231/1/Crystal%20structure%20fuculose%20Rossjohn-Jaafar.pdf
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spelling ftunivcardiff:oai:https://orca.cardiff.ac.uk:102231 2023-12-17T10:22:18+01:00 Crystal structure of fuculose aldolase from the Antarctic psychrophilic yeastGlaciozyma antarctica PI12 Jaafar, Nardiah Rizwana Littler, Dene Beddoe, Travis Rossjohn, Jamie Illias, Rosli Md Mahadi, Nor Muhammad Mackeen, Mukram Mohamed Murad, Abdul Munir Abdul Abu Bakar, Farah Diba 2016-10-27 application/pdf https://orca.cardiff.ac.uk/id/eprint/102231/ https://doi.org/10.1107/S2053230X16015612 https://orca.cardiff.ac.uk/id/eprint/102231/1/Crystal%20structure%20fuculose%20Rossjohn-Jaafar.pdf en eng International Union of Crystallography https://orca.cardiff.ac.uk/id/eprint/102231/1/Crystal%20structure%20fuculose%20Rossjohn-Jaafar.pdf Jaafar, Nardiah Rizwana, Littler, Dene, Beddoe, Travis, Rossjohn, Jamie https://orca.cardiff.ac.uk/view/cardiffauthors/A290945F.html orcid:0000-0002-2020-7522 orcid:0000-0002-2020-7522, Illias, Rosli Md, Mahadi, Nor Muhammad, Mackeen, Mukram Mohamed, Murad, Abdul Munir Abdul and Abu Bakar, Farah Diba 2016. Crystal structure of fuculose aldolase from the Antarctic psychrophilic yeastGlaciozyma antarctica PI12. Acta Crystallographica Section F Structural Biology Communications 72 (11) , pp. 831-839. 10.1107/S2053230X16015612 https://doi.org/10.1107/S2053230X16015612 file https://orca.cardiff.ac.uk/id/eprint/102231/1/Crystal%20structure%20fuculose%20Rossjohn-Jaafar.pdf doi:10.1107/S2053230X16015612 Article PeerReviewed 2016 ftunivcardiff https://doi.org/10.1107/S2053230X16015612 2023-11-23T23:33:32Z Fuculose-1-phosphate aldolase (FucA) catalyses the reversible cleavage of L-fuculose 1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. This enzyme from mesophiles and thermophiles has been extensively studied; however, there is no report on this enzyme from a psychrophile. In this study, the gene encoding FucA from Glaciozyma antarctica PI12 (GaFucA) was cloned and the enzyme was overexpressed in Escherichia coli, purified and crystallized. The tetrameric structure of GaFucA was determined to 1.34 Å resolution. The overall architecture of GaFucA and its catalytically essential histidine triad are highly conserved among other fuculose aldolases. Comparisons of structural features between GaFucA and its mesophilic and thermophilic homologues revealed that the enzyme has typical psychrophilic attributes, indicated by the presence of a high number of nonpolar residues at the surface and a lower number of arginine residues. Article in Journal/Newspaper Antarc* Antarctic Antarctica Cardiff University: ORCA (Online Research @ Cardiff) Antarctic The Antarctic Acta Crystallographica Section F Structural Biology Communications 72 11 831 839
institution Open Polar
collection Cardiff University: ORCA (Online Research @ Cardiff)
op_collection_id ftunivcardiff
language English
description Fuculose-1-phosphate aldolase (FucA) catalyses the reversible cleavage of L-fuculose 1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. This enzyme from mesophiles and thermophiles has been extensively studied; however, there is no report on this enzyme from a psychrophile. In this study, the gene encoding FucA from Glaciozyma antarctica PI12 (GaFucA) was cloned and the enzyme was overexpressed in Escherichia coli, purified and crystallized. The tetrameric structure of GaFucA was determined to 1.34 Å resolution. The overall architecture of GaFucA and its catalytically essential histidine triad are highly conserved among other fuculose aldolases. Comparisons of structural features between GaFucA and its mesophilic and thermophilic homologues revealed that the enzyme has typical psychrophilic attributes, indicated by the presence of a high number of nonpolar residues at the surface and a lower number of arginine residues.
format Article in Journal/Newspaper
author Jaafar, Nardiah Rizwana
Littler, Dene
Beddoe, Travis
Rossjohn, Jamie
Illias, Rosli Md
Mahadi, Nor Muhammad
Mackeen, Mukram Mohamed
Murad, Abdul Munir Abdul
Abu Bakar, Farah Diba
spellingShingle Jaafar, Nardiah Rizwana
Littler, Dene
Beddoe, Travis
Rossjohn, Jamie
Illias, Rosli Md
Mahadi, Nor Muhammad
Mackeen, Mukram Mohamed
Murad, Abdul Munir Abdul
Abu Bakar, Farah Diba
Crystal structure of fuculose aldolase from the Antarctic psychrophilic yeastGlaciozyma antarctica PI12
author_facet Jaafar, Nardiah Rizwana
Littler, Dene
Beddoe, Travis
Rossjohn, Jamie
Illias, Rosli Md
Mahadi, Nor Muhammad
Mackeen, Mukram Mohamed
Murad, Abdul Munir Abdul
Abu Bakar, Farah Diba
author_sort Jaafar, Nardiah Rizwana
title Crystal structure of fuculose aldolase from the Antarctic psychrophilic yeastGlaciozyma antarctica PI12
title_short Crystal structure of fuculose aldolase from the Antarctic psychrophilic yeastGlaciozyma antarctica PI12
title_full Crystal structure of fuculose aldolase from the Antarctic psychrophilic yeastGlaciozyma antarctica PI12
title_fullStr Crystal structure of fuculose aldolase from the Antarctic psychrophilic yeastGlaciozyma antarctica PI12
title_full_unstemmed Crystal structure of fuculose aldolase from the Antarctic psychrophilic yeastGlaciozyma antarctica PI12
title_sort crystal structure of fuculose aldolase from the antarctic psychrophilic yeastglaciozyma antarctica pi12
publisher International Union of Crystallography
publishDate 2016
url https://orca.cardiff.ac.uk/id/eprint/102231/
https://doi.org/10.1107/S2053230X16015612
https://orca.cardiff.ac.uk/id/eprint/102231/1/Crystal%20structure%20fuculose%20Rossjohn-Jaafar.pdf
geographic Antarctic
The Antarctic
geographic_facet Antarctic
The Antarctic
genre Antarc*
Antarctic
Antarctica
genre_facet Antarc*
Antarctic
Antarctica
op_relation https://orca.cardiff.ac.uk/id/eprint/102231/1/Crystal%20structure%20fuculose%20Rossjohn-Jaafar.pdf
Jaafar, Nardiah Rizwana, Littler, Dene, Beddoe, Travis, Rossjohn, Jamie https://orca.cardiff.ac.uk/view/cardiffauthors/A290945F.html orcid:0000-0002-2020-7522 orcid:0000-0002-2020-7522, Illias, Rosli Md, Mahadi, Nor Muhammad, Mackeen, Mukram Mohamed, Murad, Abdul Munir Abdul and Abu Bakar, Farah Diba 2016. Crystal structure of fuculose aldolase from the Antarctic psychrophilic yeastGlaciozyma antarctica PI12. Acta Crystallographica Section F Structural Biology Communications 72 (11) , pp. 831-839. 10.1107/S2053230X16015612 https://doi.org/10.1107/S2053230X16015612 file https://orca.cardiff.ac.uk/id/eprint/102231/1/Crystal%20structure%20fuculose%20Rossjohn-Jaafar.pdf
doi:10.1107/S2053230X16015612
op_doi https://doi.org/10.1107/S2053230X16015612
container_title Acta Crystallographica Section F Structural Biology Communications
container_volume 72
container_issue 11
container_start_page 831
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