Fish polyomaviruses belong to two distinct evolutionary lineages.
The Polyomaviridae is a diverse family of circular double-stranded DNA viruses. Polyomaviruses have been isolated from a wide array of animal hosts. An understanding of the evolutionary and ecological dynamics of these viruses is essential to understanding the pathogenicity of polyomaviruses. Using...
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Online Access: | http://hdl.handle.net/10092/16229 https://doi.org/10.1099/jgv.0.001041 |
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ftunivcanter:oai:ir.canterbury.ac.nz:10092/16229 2023-05-15T13:55:49+02:00 Fish polyomaviruses belong to two distinct evolutionary lineages. Van Doorslaer K Kraberger S Austin C Farkas K Bergeman M Paunil E Davison W Varsani A 2018-10-31T19:34:30Z application/pdf http://hdl.handle.net/10092/16229 https://doi.org/10.1099/jgv.0.001041 English en eng 0022-1317 1465-2099 http://hdl.handle.net/10092/16229 https://doi.org/10.1099/jgv.0.001041 Copyright 2018 The Authors. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, distribution and reproduction in any medium, provided the original author and source are credited. CC-BY Polyomaviridae Antarctica emerald notothen Trematomus bernacchii Fields of Research::31 - Biological sciences::3107 - Microbiology::310706 - Virology Fields of Research::31 - Biological sciences::3104 - Evolutionary biology::310410 - Phylogeny and comparative analysis Journal Article 2018 ftunivcanter https://doi.org/10.1099/jgv.0.001041 2022-09-08T13:30:36Z The Polyomaviridae is a diverse family of circular double-stranded DNA viruses. Polyomaviruses have been isolated from a wide array of animal hosts. An understanding of the evolutionary and ecological dynamics of these viruses is essential to understanding the pathogenicity of polyomaviruses. Using a high throughput sequencing approach, we identified a novel polyomavirus in an emerald notothen (Trematomus bernacchii) sampled in the Ross sea (Antarctica), expanding the known number of fish-associated polyomaviruses. Our analysis suggests that polyomaviruses belong to three main evolutionary clades; the first clade is made up of all recognized terrestrial polyomaviruses. The fish-associated polyomaviruses are not monophyletic, and belong to two divergent evolutionary lineages. The fish viruses provide evidence that the evolution of the key viral large T protein involves gain and loss of distinct domains. Article in Journal/Newspaper Antarc* Antarctica Ross Sea University of Canterbury, Christchurch: UC Research Repository Ross Sea Journal of General Virology 99 4 567 573 |
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Open Polar |
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University of Canterbury, Christchurch: UC Research Repository |
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ftunivcanter |
language |
English |
topic |
Polyomaviridae Antarctica emerald notothen Trematomus bernacchii Fields of Research::31 - Biological sciences::3107 - Microbiology::310706 - Virology Fields of Research::31 - Biological sciences::3104 - Evolutionary biology::310410 - Phylogeny and comparative analysis |
spellingShingle |
Polyomaviridae Antarctica emerald notothen Trematomus bernacchii Fields of Research::31 - Biological sciences::3107 - Microbiology::310706 - Virology Fields of Research::31 - Biological sciences::3104 - Evolutionary biology::310410 - Phylogeny and comparative analysis Van Doorslaer K Kraberger S Austin C Farkas K Bergeman M Paunil E Davison W Varsani A Fish polyomaviruses belong to two distinct evolutionary lineages. |
topic_facet |
Polyomaviridae Antarctica emerald notothen Trematomus bernacchii Fields of Research::31 - Biological sciences::3107 - Microbiology::310706 - Virology Fields of Research::31 - Biological sciences::3104 - Evolutionary biology::310410 - Phylogeny and comparative analysis |
description |
The Polyomaviridae is a diverse family of circular double-stranded DNA viruses. Polyomaviruses have been isolated from a wide array of animal hosts. An understanding of the evolutionary and ecological dynamics of these viruses is essential to understanding the pathogenicity of polyomaviruses. Using a high throughput sequencing approach, we identified a novel polyomavirus in an emerald notothen (Trematomus bernacchii) sampled in the Ross sea (Antarctica), expanding the known number of fish-associated polyomaviruses. Our analysis suggests that polyomaviruses belong to three main evolutionary clades; the first clade is made up of all recognized terrestrial polyomaviruses. The fish-associated polyomaviruses are not monophyletic, and belong to two divergent evolutionary lineages. The fish viruses provide evidence that the evolution of the key viral large T protein involves gain and loss of distinct domains. |
format |
Article in Journal/Newspaper |
author |
Van Doorslaer K Kraberger S Austin C Farkas K Bergeman M Paunil E Davison W Varsani A |
author_facet |
Van Doorslaer K Kraberger S Austin C Farkas K Bergeman M Paunil E Davison W Varsani A |
author_sort |
Van Doorslaer K |
title |
Fish polyomaviruses belong to two distinct evolutionary lineages. |
title_short |
Fish polyomaviruses belong to two distinct evolutionary lineages. |
title_full |
Fish polyomaviruses belong to two distinct evolutionary lineages. |
title_fullStr |
Fish polyomaviruses belong to two distinct evolutionary lineages. |
title_full_unstemmed |
Fish polyomaviruses belong to two distinct evolutionary lineages. |
title_sort |
fish polyomaviruses belong to two distinct evolutionary lineages. |
publishDate |
2018 |
url |
http://hdl.handle.net/10092/16229 https://doi.org/10.1099/jgv.0.001041 |
geographic |
Ross Sea |
geographic_facet |
Ross Sea |
genre |
Antarc* Antarctica Ross Sea |
genre_facet |
Antarc* Antarctica Ross Sea |
op_relation |
0022-1317 1465-2099 http://hdl.handle.net/10092/16229 https://doi.org/10.1099/jgv.0.001041 |
op_rights |
Copyright 2018 The Authors. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, distribution and reproduction in any medium, provided the original author and source are credited. |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1099/jgv.0.001041 |
container_title |
Journal of General Virology |
container_volume |
99 |
container_issue |
4 |
container_start_page |
567 |
op_container_end_page |
573 |
_version_ |
1766262687277252608 |