Taxonomy 2.0: Computer-aided identification tools to assist Antarctic biologists in the field and in the laboratory

Species inventories are essential to the implementation of conservation policies to mitigate biodiversity loss and maintain ecosystem services and their value to the society. This is particularly topical with respect to climate change and direct anthropogenic effects on Antarctic biodiversity, with...

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Main Authors: Saucède, Thomas, Eléaume, Marc, Jossart, Quentin, Moreau, Camille, Downey, Rachel, Bax, Narissa, Sands, Chester, Mercado, Borja, Gallut, Cyril, Vignes-Lebbe, Régine
Format: Article in Journal/Newspaper
Language:English
Published: 2020
Subjects:
Online Access:http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/314032
https://dipot.ulb.ac.be/dspace/bitstream/2013/314032/3/Saucede_taxonomy_2.0.pdf
id ftunivbruxelles:oai:dipot.ulb.ac.be:2013/314032
record_format openpolar
spelling ftunivbruxelles:oai:dipot.ulb.ac.be:2013/314032 2023-05-15T13:54:45+02:00 Taxonomy 2.0: Computer-aided identification tools to assist Antarctic biologists in the field and in the laboratory Saucède, Thomas Eléaume, Marc Jossart, Quentin Moreau, Camille Downey, Rachel Bax, Narissa Sands, Chester Mercado, Borja Gallut, Cyril Vignes-Lebbe, Régine 2020-05-01 1 full-text file(s): application/pdf http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/314032 https://dipot.ulb.ac.be/dspace/bitstream/2013/314032/3/Saucede_taxonomy_2.0.pdf en eng uri/info:doi/10.1017/S0954102020000462 uri/info:scp/85093861778 https://dipot.ulb.ac.be/dspace/bitstream/2013/314032/3/Saucede_taxonomy_2.0.pdf http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/314032 1 full-text file(s): info:eu-repo/semantics/openAccess Antarctic science Ecologie Evolution des espèces Océanographie physique et chimique Géologie Database Field guides Knowledge base Software Taxonomic key Xper3 info:eu-repo/semantics/article info:ulb-repo/semantics/articlePeerReview info:ulb-repo/semantics/openurl/article 2020 ftunivbruxelles 2022-06-12T22:00:07Z Species inventories are essential to the implementation of conservation policies to mitigate biodiversity loss and maintain ecosystem services and their value to the society. This is particularly topical with respect to climate change and direct anthropogenic effects on Antarctic biodiversity, with the identification of the most at-risk taxa and geographical areas becoming a priority. Identification tools are often neglected and considered helpful only for taxonomists. However, the development of new online information technologies and computer-aided identification tools provides an opportunity to promote them to a wider audience, especially considering the emerging generation of scientists who apply an integrative approach to taxonomy. This paper aims to clarify essential concepts and provide convenient and accessible tools, tips and suggested systems to use and develop knowledge bases (KBs). The software Xper3 was selected as an example of a user-friendly KB management system to give a general overview of existing tools and functionalities through two applications: the 'Antarctic Echinoids' and 'Odontasteridae Southern Ocean (Asteroids)' KBs. We highlight the advantages provided by KBs over more classical tools, and future potential uses are highlighted, including the production of field guides to aid in the compilation of species inventories for biodiversity conservation purposes. SCOPUS: ar.j info:eu-repo/semantics/published Article in Journal/Newspaper Antarc* Antarctic Antarctic Science Southern Ocean DI-fusion : dépôt institutionnel de l'Université libre de Bruxelles (ULB) Antarctic Southern Ocean The Antarctic
institution Open Polar
collection DI-fusion : dépôt institutionnel de l'Université libre de Bruxelles (ULB)
op_collection_id ftunivbruxelles
language English
topic Ecologie
Evolution des espèces
Océanographie physique et chimique
Géologie
Database
Field guides
Knowledge base
Software
Taxonomic key
Xper3
spellingShingle Ecologie
Evolution des espèces
Océanographie physique et chimique
Géologie
Database
Field guides
Knowledge base
Software
Taxonomic key
Xper3
Saucède, Thomas
Eléaume, Marc
Jossart, Quentin
Moreau, Camille
Downey, Rachel
Bax, Narissa
Sands, Chester
Mercado, Borja
Gallut, Cyril
Vignes-Lebbe, Régine
Taxonomy 2.0: Computer-aided identification tools to assist Antarctic biologists in the field and in the laboratory
topic_facet Ecologie
Evolution des espèces
Océanographie physique et chimique
Géologie
Database
Field guides
Knowledge base
Software
Taxonomic key
Xper3
description Species inventories are essential to the implementation of conservation policies to mitigate biodiversity loss and maintain ecosystem services and their value to the society. This is particularly topical with respect to climate change and direct anthropogenic effects on Antarctic biodiversity, with the identification of the most at-risk taxa and geographical areas becoming a priority. Identification tools are often neglected and considered helpful only for taxonomists. However, the development of new online information technologies and computer-aided identification tools provides an opportunity to promote them to a wider audience, especially considering the emerging generation of scientists who apply an integrative approach to taxonomy. This paper aims to clarify essential concepts and provide convenient and accessible tools, tips and suggested systems to use and develop knowledge bases (KBs). The software Xper3 was selected as an example of a user-friendly KB management system to give a general overview of existing tools and functionalities through two applications: the 'Antarctic Echinoids' and 'Odontasteridae Southern Ocean (Asteroids)' KBs. We highlight the advantages provided by KBs over more classical tools, and future potential uses are highlighted, including the production of field guides to aid in the compilation of species inventories for biodiversity conservation purposes. SCOPUS: ar.j info:eu-repo/semantics/published
format Article in Journal/Newspaper
author Saucède, Thomas
Eléaume, Marc
Jossart, Quentin
Moreau, Camille
Downey, Rachel
Bax, Narissa
Sands, Chester
Mercado, Borja
Gallut, Cyril
Vignes-Lebbe, Régine
author_facet Saucède, Thomas
Eléaume, Marc
Jossart, Quentin
Moreau, Camille
Downey, Rachel
Bax, Narissa
Sands, Chester
Mercado, Borja
Gallut, Cyril
Vignes-Lebbe, Régine
author_sort Saucède, Thomas
title Taxonomy 2.0: Computer-aided identification tools to assist Antarctic biologists in the field and in the laboratory
title_short Taxonomy 2.0: Computer-aided identification tools to assist Antarctic biologists in the field and in the laboratory
title_full Taxonomy 2.0: Computer-aided identification tools to assist Antarctic biologists in the field and in the laboratory
title_fullStr Taxonomy 2.0: Computer-aided identification tools to assist Antarctic biologists in the field and in the laboratory
title_full_unstemmed Taxonomy 2.0: Computer-aided identification tools to assist Antarctic biologists in the field and in the laboratory
title_sort taxonomy 2.0: computer-aided identification tools to assist antarctic biologists in the field and in the laboratory
publishDate 2020
url http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/314032
https://dipot.ulb.ac.be/dspace/bitstream/2013/314032/3/Saucede_taxonomy_2.0.pdf
geographic Antarctic
Southern Ocean
The Antarctic
geographic_facet Antarctic
Southern Ocean
The Antarctic
genre Antarc*
Antarctic
Antarctic Science
Southern Ocean
genre_facet Antarc*
Antarctic
Antarctic Science
Southern Ocean
op_source Antarctic science
op_relation uri/info:doi/10.1017/S0954102020000462
uri/info:scp/85093861778
https://dipot.ulb.ac.be/dspace/bitstream/2013/314032/3/Saucede_taxonomy_2.0.pdf
http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/314032
op_rights 1 full-text file(s): info:eu-repo/semantics/openAccess
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