The Genome of the Beluga Whale (Delphinapterus leucas)

The beluga whale is a cetacean that inhabits arctic and subarctic regions, and is the only living member of the genus Delphinapterus. The genome of the beluga whale was determined using DNA sequencing approaches that employed both microfluidic partitioning library and non-partitioned library constru...

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Published in:Genes
Main Authors: Jones, Steven J. M., Taylor, Gregory A., Chan, Simon, Warren, René L., Hammond, S. Austin, Bilobram, Steven, Mordecai, Gideon, Suttle, Curtis A., Miller, Kristina M., Schulze, Angela, Chan, Amy M., Jones, Samantha J., Tse, Kane, Li, Irene, Cheung, Dorothy, Mungall, Karen L., Choo, Caleb, Ally, Adrian, Dhalla, Noreen, Tam, Angela K. Y., Troussard, Armelle, Kirk, Heather, Pandoh, Pawan, Paulino, Daniel, Coope, Robin J. N., Mungall, Andrew J., Moore, Richard, Zhao, Yongjun, Birol, Inanc, Ma, Yussanne, Marra, Marco, Haulena, Martin
Format: Article in Journal/Newspaper
Language:English
Published: Multidisciplinary Digital Publishing Institute 2017
Subjects:
Online Access:http://hdl.handle.net/2429/70896
https://doi.org/10.3390/genes8120378
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spelling ftunivbritcolcir:oai:circle.library.ubc.ca:2429/70896 2023-05-15T15:04:02+02:00 The Genome of the Beluga Whale (Delphinapterus leucas) Jones, Steven J. M. Taylor, Gregory A. Chan, Simon Warren, René L. Hammond, S. Austin Bilobram, Steven Mordecai, Gideon Suttle, Curtis A. Miller, Kristina M. Schulze, Angela Chan, Amy M. Jones, Samantha J. Tse, Kane Li, Irene Cheung, Dorothy Mungall, Karen L. Choo, Caleb Ally, Adrian Dhalla, Noreen Tam, Angela K. Y. Troussard, Armelle Kirk, Heather Pandoh, Pawan Paulino, Daniel Coope, Robin J. N. Mungall, Andrew J. Moore, Richard Zhao, Yongjun Birol, Inanc Ma, Yussanne Marra, Marco Haulena, Martin 2017-12-11 http://hdl.handle.net/2429/70896 https://doi.org/10.3390/genes8120378 eng eng Multidisciplinary Digital Publishing Institute CC BY 4.0 https://creativecommons.org/licenses/by/4.0/ CC-BY Genome Genome assembly Beluga whale Delphinapterus leucas Cetacea Text Article 2017 ftunivbritcolcir https://doi.org/10.3390/genes8120378 2019-10-15T18:28:38Z The beluga whale is a cetacean that inhabits arctic and subarctic regions, and is the only living member of the genus Delphinapterus. The genome of the beluga whale was determined using DNA sequencing approaches that employed both microfluidic partitioning library and non-partitioned library construction. The former allowed for the construction of a highly contiguous assembly with a scaffold N50 length of over 19 Mbp and total reconstruction of 2.32 Gbp. To aid our understanding of the functional elements, transcriptome data was also derived from brain, duodenum, heart, lung, spleen, and liver tissue. Assembled sequence and all of the underlying sequence data are available at the National Center for Biotechnology Information (NCBI) under the Bioproject accession number PRJNA360851A. Medicine, Faculty of Science, Faculty of Non UBC Botany, Department of Earth, Ocean and Atmospheric Sciences, Department of Medical Genetics, Department of Microbiology and Immunology, Department of Oceans and Fisheries, Institute for the Reviewed Faculty Article in Journal/Newspaper Arctic Beluga Beluga whale Beluga* Delphinapterus leucas Subarctic University of British Columbia: cIRcle - UBC's Information Repository Arctic Genes 8 12 378
institution Open Polar
collection University of British Columbia: cIRcle - UBC's Information Repository
op_collection_id ftunivbritcolcir
language English
topic Genome
Genome assembly
Beluga whale
Delphinapterus leucas
Cetacea
spellingShingle Genome
Genome assembly
Beluga whale
Delphinapterus leucas
Cetacea
Jones, Steven J. M.
Taylor, Gregory A.
Chan, Simon
Warren, René L.
Hammond, S. Austin
Bilobram, Steven
Mordecai, Gideon
Suttle, Curtis A.
Miller, Kristina M.
Schulze, Angela
Chan, Amy M.
Jones, Samantha J.
Tse, Kane
Li, Irene
Cheung, Dorothy
Mungall, Karen L.
Choo, Caleb
Ally, Adrian
Dhalla, Noreen
Tam, Angela K. Y.
Troussard, Armelle
Kirk, Heather
Pandoh, Pawan
Paulino, Daniel
Coope, Robin J. N.
Mungall, Andrew J.
Moore, Richard
Zhao, Yongjun
Birol, Inanc
Ma, Yussanne
Marra, Marco
Haulena, Martin
The Genome of the Beluga Whale (Delphinapterus leucas)
topic_facet Genome
Genome assembly
Beluga whale
Delphinapterus leucas
Cetacea
description The beluga whale is a cetacean that inhabits arctic and subarctic regions, and is the only living member of the genus Delphinapterus. The genome of the beluga whale was determined using DNA sequencing approaches that employed both microfluidic partitioning library and non-partitioned library construction. The former allowed for the construction of a highly contiguous assembly with a scaffold N50 length of over 19 Mbp and total reconstruction of 2.32 Gbp. To aid our understanding of the functional elements, transcriptome data was also derived from brain, duodenum, heart, lung, spleen, and liver tissue. Assembled sequence and all of the underlying sequence data are available at the National Center for Biotechnology Information (NCBI) under the Bioproject accession number PRJNA360851A. Medicine, Faculty of Science, Faculty of Non UBC Botany, Department of Earth, Ocean and Atmospheric Sciences, Department of Medical Genetics, Department of Microbiology and Immunology, Department of Oceans and Fisheries, Institute for the Reviewed Faculty
format Article in Journal/Newspaper
author Jones, Steven J. M.
Taylor, Gregory A.
Chan, Simon
Warren, René L.
Hammond, S. Austin
Bilobram, Steven
Mordecai, Gideon
Suttle, Curtis A.
Miller, Kristina M.
Schulze, Angela
Chan, Amy M.
Jones, Samantha J.
Tse, Kane
Li, Irene
Cheung, Dorothy
Mungall, Karen L.
Choo, Caleb
Ally, Adrian
Dhalla, Noreen
Tam, Angela K. Y.
Troussard, Armelle
Kirk, Heather
Pandoh, Pawan
Paulino, Daniel
Coope, Robin J. N.
Mungall, Andrew J.
Moore, Richard
Zhao, Yongjun
Birol, Inanc
Ma, Yussanne
Marra, Marco
Haulena, Martin
author_facet Jones, Steven J. M.
Taylor, Gregory A.
Chan, Simon
Warren, René L.
Hammond, S. Austin
Bilobram, Steven
Mordecai, Gideon
Suttle, Curtis A.
Miller, Kristina M.
Schulze, Angela
Chan, Amy M.
Jones, Samantha J.
Tse, Kane
Li, Irene
Cheung, Dorothy
Mungall, Karen L.
Choo, Caleb
Ally, Adrian
Dhalla, Noreen
Tam, Angela K. Y.
Troussard, Armelle
Kirk, Heather
Pandoh, Pawan
Paulino, Daniel
Coope, Robin J. N.
Mungall, Andrew J.
Moore, Richard
Zhao, Yongjun
Birol, Inanc
Ma, Yussanne
Marra, Marco
Haulena, Martin
author_sort Jones, Steven J. M.
title The Genome of the Beluga Whale (Delphinapterus leucas)
title_short The Genome of the Beluga Whale (Delphinapterus leucas)
title_full The Genome of the Beluga Whale (Delphinapterus leucas)
title_fullStr The Genome of the Beluga Whale (Delphinapterus leucas)
title_full_unstemmed The Genome of the Beluga Whale (Delphinapterus leucas)
title_sort genome of the beluga whale (delphinapterus leucas)
publisher Multidisciplinary Digital Publishing Institute
publishDate 2017
url http://hdl.handle.net/2429/70896
https://doi.org/10.3390/genes8120378
geographic Arctic
geographic_facet Arctic
genre Arctic
Beluga
Beluga whale
Beluga*
Delphinapterus leucas
Subarctic
genre_facet Arctic
Beluga
Beluga whale
Beluga*
Delphinapterus leucas
Subarctic
op_rights CC BY 4.0
https://creativecommons.org/licenses/by/4.0/
op_rightsnorm CC-BY
op_doi https://doi.org/10.3390/genes8120378
container_title Genes
container_volume 8
container_issue 12
container_start_page 378
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